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The map label for this gene is scpB [H]

Identifier: 220917362

GI number: 220917362

Start: 2511531

End: 2512694

Strand: Direct

Name: scpB [H]

Synonym: A2cp1_2262

Alternate gene names: 220917362

Gene position: 2511531-2512694 (Clockwise)

Preceding gene: 220917361

Following gene: 220917363

Centisome position: 49.94

GC content: 75.69

Gene sequence:

>1164_bases
ATGACCGAGCCCACCGACCGGCCGACCGCCGCGGAGGACGTGCCCGCGCCGGACGGCGCGGGGCCGGAGGGCTCCGCCGC
GCAGCCCGAGGCCGCGCCCGCTGCCGCGACGCCGGCTGCCGACGCGCCGGGTACCGAAGCGCCGGGTACCGAAGCGCCGG
GTACCGACGCGCCGGCTGCCGACGCGCCGCCCGCGGCGTCGGTGTCCGCGGCCGAGCTGGACGCGCTCCAGGCCGCCGAG
GAGGCGAAGCAGGGCGACCCGGCGCTCGACGAGGTGGATCCGGCCGACATCGACGTGGCCGACGACAAGGAGCTCCCGTT
CGAGAAGCTGGCCGCGGCGGCCCGGCGGCTCAGCGCCGACCGGGTCCGCACCGTGGTCGAGACGCTGCTGTTCCTGGCCG
AGCGCCCGCTGAGCGTGGAGGAGATGCGCGCCGCGAGCGGCGTCGAGGTGGAGCGGCTGGAGAAGGCGCTCGACAAGCTC
TCCGGCCACTACCGCGAGGGCCCCTGCGGCATCGTGCTGCACGAGGTGGCCGGCGGCTGGCAGCTCCGCACCTCGCCGGA
CAACTCCGACTTCGCGCGCCGCTTCCTCAAGGTGAAGCCGCAGCGGCTGACCCGCGCCGCGCTCGAGACGCTCGCCATCA
TCGCGTACCGGCAGCCGGTGACCCGCCCCGAGATCGAGGACATCCGCGGCGTGGACTGCGGCGCGGTGGTGAAGGCGCTG
CTCGAGCGCAAGCTGGTCAAGATCCTCGGCAAGAAGGAGGAGCCGGGGCGGCCCATCCTGTACGGCACCACCCGCGAGTT
CCTGGAGTTCTTCGCGCTGAAGGACCTCGCCTCCCTCCCCACGCTGCGCGAGTTCCACGAGCTCTCCGAGGAGCACCGCG
ACATCGTGGAGAAGGAGGCGCCGGCGGAGCAGGCGCCCGGGATCGAGGGCATCGTGGCCGAGCTCTCCGACGAGAAGCTC
CGCGCCGAGCTGGAGGCGAAGCGCGCCGAGAGCGACGCGGCGCTCGACGAGCTCGAGCAGGCGATGGCCGCGGCGGACGA
GAAGGCGCGCGCGGCCGAGGCCGCGCTCGCCGACAAGAAGCGGGCCGACGAGGCCGAGGCGCAGGCCGACGCGGAGCCCG
GCGCCGGCGCCGGGCCCGGTGGACCGCCGGCGGCGGGGAGCTAG

Upstream 100 bases:

>100_bases
ACCAGGCCGCGCTGGACGACGCCGGCCCCGGGGCCGAGATCCTCGTCGAGGCGAAGGACACCCTCGGCGACGACGTCCCC
GTCGGACAGGAGGACTACCG

Downstream 100 bases:

>100_bases
CGATGGCCGAGGAGCGGCTGCAGAAGTTCCTGGCGGGGGCGGGCATCGCCTCGCGGCGCAAGGCGGAGGCGCTCATCAGC
GCCGGCCGCGTGCGCGTCAA

Product: chromosome segregation and condensation protein ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTEPTDRPTAAEDVPAPDGAGPEGSAAQPEAAPAAATPAADAPGTEAPGTEAPGTDAPAADAPPAASVSAAELDALQAAE
EAKQGDPALDEVDPADIDVADDKELPFEKLAAAARRLSADRVRTVVETLLFLAERPLSVEEMRAASGVEVERLEKALDKL
SGHYREGPCGIVLHEVAGGWQLRTSPDNSDFARRFLKVKPQRLTRAALETLAIIAYRQPVTRPEIEDIRGVDCGAVVKAL
LERKLVKILGKKEEPGRPILYGTTREFLEFFALKDLASLPTLREFHELSEEHRDIVEKEAPAEQAPGIEGIVAELSDEKL
RAELEAKRAESDAALDELEQAMAAADEKARAAEAALADKKRADEAEAQADAEPGAGAGPGGPPAAGS

Sequences:

>Translated_387_residues
MTEPTDRPTAAEDVPAPDGAGPEGSAAQPEAAPAAATPAADAPGTEAPGTEAPGTDAPAADAPPAASVSAAELDALQAAE
EAKQGDPALDEVDPADIDVADDKELPFEKLAAAARRLSADRVRTVVETLLFLAERPLSVEEMRAASGVEVERLEKALDKL
SGHYREGPCGIVLHEVAGGWQLRTSPDNSDFARRFLKVKPQRLTRAALETLAIIAYRQPVTRPEIEDIRGVDCGAVVKAL
LERKLVKILGKKEEPGRPILYGTTREFLEFFALKDLASLPTLREFHELSEEHRDIVEKEAPAEQAPGIEGIVAELSDEKL
RAELEAKRAESDAALDELEQAMAAADEKARAAEAALADKKRADEAEAQADAEPGAGAGPGGPPAAGS
>Mature_386_residues
TEPTDRPTAAEDVPAPDGAGPEGSAAQPEAAPAAATPAADAPGTEAPGTEAPGTDAPAADAPPAASVSAAELDALQAAEE
AKQGDPALDEVDPADIDVADDKELPFEKLAAAARRLSADRVRTVVETLLFLAERPLSVEEMRAASGVEVERLEKALDKLS
GHYREGPCGIVLHEVAGGWQLRTSPDNSDFARRFLKVKPQRLTRAALETLAIIAYRQPVTRPEIEDIRGVDCGAVVKALL
ERKLVKILGKKEEPGRPILYGTTREFLEFFALKDLASLPTLREFHELSEEHRDIVEKEAPAEQAPGIEGIVAELSDEKLR
AELEAKRAESDAALDELEQAMAAADEKARAAEAALADKKRADEAEAQADAEPGAGAGPGGPPAAGS

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpA that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 40721; Mature: 40589

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPTDRPTAAEDVPAPDGAGPEGSAAQPEAAPAAATPAADAPGTEAPGTEAPGTDAPAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAPPAASVSAAELDALQAAEEAKQGDPALDEVDPADIDVADDKELPFEKLAAAARRLSAD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RVRTVVETLLFLAERPLSVEEMRAASGVEVERLEKALDKLSGHYREGPCGIVLHEVAGGW
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCE
QLRTSPDNSDFARRFLKVKPQRLTRAALETLAIIAYRQPVTRPEIEDIRGVDCGAVVKAL
EEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHH
LERKLVKILGKKEEPGRPILYGTTREFLEFFALKDLASLPTLREFHELSEEHRDIVEKEA
HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PAEQAPGIEGIVAELSDEKLRAELEAKRAESDAALDELEQAMAAADEKARAAEAALADKK
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADEAEAQADAEPGAGAGPGGPPAAGS
HHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEPTDRPTAAEDVPAPDGAGPEGSAAQPEAAPAAATPAADAPGTEAPGTEAPGTDAPAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DAPPAASVSAAELDALQAAEEAKQGDPALDEVDPADIDVADDKELPFEKLAAAARRLSAD
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
RVRTVVETLLFLAERPLSVEEMRAASGVEVERLEKALDKLSGHYREGPCGIVLHEVAGGW
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEHHHCCCE
QLRTSPDNSDFARRFLKVKPQRLTRAALETLAIIAYRQPVTRPEIEDIRGVDCGAVVKAL
EEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHH
LERKLVKILGKKEEPGRPILYGTTREFLEFFALKDLASLPTLREFHELSEEHRDIVEKEA
HHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
PAEQAPGIEGIVAELSDEKLRAELEAKRAESDAALDELEQAMAAADEKARAAEAALADKK
CHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADEAEAQADAEPGAGAGPGGPPAAGS
HHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA