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The map label for this gene is scpA [H]

Identifier: 220917361

GI number: 220917361

Start: 2510635

End: 2511534

Strand: Direct

Name: scpA [H]

Synonym: A2cp1_2261

Alternate gene names: 220917361

Gene position: 2510635-2511534 (Clockwise)

Preceding gene: 220917360

Following gene: 220917362

Centisome position: 49.92

GC content: 72.11

Gene sequence:

>900_bases
ATGGCCAGGAACAGCGACACGGACGCCGGGCTCGGCGCGGACTCGCCGCGCGCCGACGACGCCGACGCGCGCGCCGCGGC
GGACGCGTTCCGGGTCACGCTCCCCCCGCTCCGCGAGGGCCAGCCGCCGTTCGAGGGGCCGCTCGACCTCATCCTTCACC
TGGTGAAGGAGCACGAGGTCGATCTCTTCGACATCCCCATCGCGCGGATCACCGAGAGCTACCTCGCCACGCTCGAGGCG
ATGCGCGACCTCGACATCGACATCGCCGGCGAGTTCCTGCACATGGCGGCGCAGCTCCTGCTCATGAAGAGCAAGCTGCT
GCTCCCGCGCACCGAGGTGGCCGAGGACGCGGCCGGTCCCGAGGACGCCGGGGTGGACCCGCGCGCCGAGCTGGTGCGGC
GGCTGCTCGAGTACCAGAAGTACAAGGCCGCCGGCGAGGAGCTGGGCGGGCGCGACATCCTCGACCGCACCGTGTTCACG
CGGCGCGTCCGGGCCGAGCGCCCCGCCGCGCCGGACGGGCCGGAGGGGCTCGCCGACGTCTCGGTGTTCAAGCTCATCGA
GGCGCTCGATCGCGCCATCGCGCACGCGCGCCCGGAGCACACGCACGACGTGATCACCGACCGGCTCACCATCAGCGACG
CCATCTCCCGCGTCGCCGACGTGCTCCGGCTGCGGCGGCGCGCCACGTTCGAGGAGCTGCTCGCCGGCCCGGCCGAGAAC
CGGAACACCAAGGCGAACGTGATCTCCACGTTCCTCGCCATCCTGGAGATGGCGAAGCTGAAGCTCATCCGCATCTACCA
GGCCGCGCTGGACGACGCCGGCCCCGGGGCCGAGATCCTCGTCGAGGCGAAGGACACCCTCGGCGACGACGTCCCCGTCG
GACAGGAGGACTACCGATGA

Upstream 100 bases:

>100_bases
GGGAACGAGAAGGCGCGCGCCGCGGCGGAGGCCAACATGGTCCAGGTCCGCGCCGCGATGAAGCTCGAGTAGGACCCACC
ACGGGGGGCGGTCCGCCGGG

Downstream 100 bases:

>100_bases
CCGAGCCCACCGACCGGCCGACCGCCGCGGAGGACGTGCCCGCGCCGGACGGCGCGGGGCCGGAGGGCTCCGCCGCGCAG
CCCGAGGCCGCGCCCGCTGC

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MARNSDTDAGLGADSPRADDADARAAADAFRVTLPPLREGQPPFEGPLDLILHLVKEHEVDLFDIPIARITESYLATLEA
MRDLDIDIAGEFLHMAAQLLLMKSKLLLPRTEVAEDAAGPEDAGVDPRAELVRRLLEYQKYKAAGEELGGRDILDRTVFT
RRVRAERPAAPDGPEGLADVSVFKLIEALDRAIAHARPEHTHDVITDRLTISDAISRVADVLRLRRRATFEELLAGPAEN
RNTKANVISTFLAILEMAKLKLIRIYQAALDDAGPGAEILVEAKDTLGDDVPVGQEDYR

Sequences:

>Translated_299_residues
MARNSDTDAGLGADSPRADDADARAAADAFRVTLPPLREGQPPFEGPLDLILHLVKEHEVDLFDIPIARITESYLATLEA
MRDLDIDIAGEFLHMAAQLLLMKSKLLLPRTEVAEDAAGPEDAGVDPRAELVRRLLEYQKYKAAGEELGGRDILDRTVFT
RRVRAERPAAPDGPEGLADVSVFKLIEALDRAIAHARPEHTHDVITDRLTISDAISRVADVLRLRRRATFEELLAGPAEN
RNTKANVISTFLAILEMAKLKLIRIYQAALDDAGPGAEILVEAKDTLGDDVPVGQEDYR
>Mature_298_residues
ARNSDTDAGLGADSPRADDADARAAADAFRVTLPPLREGQPPFEGPLDLILHLVKEHEVDLFDIPIARITESYLATLEAM
RDLDIDIAGEFLHMAAQLLLMKSKLLLPRTEVAEDAAGPEDAGVDPRAELVRRLLEYQKYKAAGEELGGRDILDRTVFTR
RVRAERPAAPDGPEGLADVSVFKLIEALDRAIAHARPEHTHDVITDRLTISDAISRVADVLRLRRRATFEELLAGPAENR
NTKANVISTFLAILEMAKLKLIRIYQAALDDAGPGAEILVEAKDTLGDDVPVGQEDYR

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32808; Mature: 32676

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARNSDTDAGLGADSPRADDADARAAADAFRVTLPPLREGQPPFEGPLDLILHLVKEHEV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCC
DLFDIPIARITESYLATLEAMRDLDIDIAGEFLHMAAQLLLMKSKLLLPRTEVAEDAAGP
CCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
EDAGVDPRAELVRRLLEYQKYKAAGEELGGRDILDRTVFTRRVRAERPAAPDGPEGLADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SVFKLIEALDRAIAHARPEHTHDVITDRLTISDAISRVADVLRLRRRATFEELLAGPAEN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RNTKANVISTFLAILEMAKLKLIRIYQAALDDAGPGAEILVEAKDTLGDDVPVGQEDYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
ARNSDTDAGLGADSPRADDADARAAADAFRVTLPPLREGQPPFEGPLDLILHLVKEHEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHCCC
DLFDIPIARITESYLATLEAMRDLDIDIAGEFLHMAAQLLLMKSKLLLPRTEVAEDAAGP
CCEECCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
EDAGVDPRAELVRRLLEYQKYKAAGEELGGRDILDRTVFTRRVRAERPAAPDGPEGLADV
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
SVFKLIEALDRAIAHARPEHTHDVITDRLTISDAISRVADVLRLRRRATFEELLAGPAEN
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
RNTKANVISTFLAILEMAKLKLIRIYQAALDDAGPGAEILVEAKDTLGDDVPVGQEDYR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA