| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is bfmBAA [H]
Identifier: 220917206
GI number: 220917206
Start: 2344981
End: 2346174
Strand: Direct
Name: bfmBAA [H]
Synonym: A2cp1_2103
Alternate gene names: 220917206
Gene position: 2344981-2346174 (Clockwise)
Preceding gene: 220917205
Following gene: 220917207
Centisome position: 46.63
GC content: 72.78
Gene sequence:
>1194_bases ATGCGCCGAGAGCACGTGGTGGGTCCGCCGACGAGGCATCACCCGCGCGAGGCACGGGACTACGAGCCCGGCCGGTTCCT GAAGGAGTTCCCGCTCCACACGGTCATCCGTGAGGACGGCTCCGCGGATCCGGACGAGGTGGTCCTGCCGGACGCGGAGG CGCTGCGGCTGTACCGGTGGATGGTGCTGAACCGCGCGCTCGACGAGCGGATGATCACGCTCCAGCGCCAGGGGCGGATC GGCTTCTACATCGGGTCGATCGGCGAGGAGGCCACCGTGCTCGGCACGGCGGCGGCGATGGACGAGCGCGACTGGATCTA CCCGTGCTACCGCGAGCACGGGGCCGCGCTGCTGCGCGGGATGCCGCTCGTCACGTTCGTCTGCGACCTGTTCGGCAACG GCGGGGACGCCATGAAGGGCCGGCAGATGCCCTGCCACGAGGCGTGGCGGCCGGGCCGCTTCACCTCGATCAGCTCGCCC ATCGCCACCCAGGTCTCGCAGGCGATGGGCGGCGCCTGGGCGGCGAAGCTGAAGGGCGAGGAGATGGTCGCCATCACCTA CTTCGGCGAGGGCGCCACCAGCGCGCACGACTTCCACACCGGCCTGAACTTCGCGGCGGTGCGGAAGATCCCGGTGGTGT TCGTGTGCCGCAACAACGGCTGGGCCATCAGCGTGCCGCGCGAGCGGCAGACCGCCTCCGAGACCATCGCGCAGAAGGCG ATCGCGTACGGCATGCGCGGCGAGCGCGTCGATGGGAACGACCTGCTCGCGGTGTACGCCGCCACCCGCCGGGCGCGGGC GCGCGCCGCCGCCGGCGAGGGCCCGACGCTGCTCGAGTGCGTGACCTACCGCATCGAGGGGCACTCGACCTCCGACGACC CGCGCGCGTACCGGCCGGCCGAGCTGGTCGAGCCCTGGAAGCGCAAGGACCCGATCCTGCGCATGCGCCGCTACCTCTCG CGGCGCGGCGCGCTCGACGAGGCGCAGGACGCCGCGCTCCGCGACGAGCTGCGCGAGCAGATCCAGGCGGCGCTGAAGGA GGCCGAGGCGTTCCCGGCCAAGCCGTCCATCGAGACGCTGTTCGCCGACGTGTACGAGGAGCCGCTCTGGCAGCAGCGCG AGCAGCTGGCCGAGATCGAGGCGGCGGTCGCCGCGGACCCGCGCGCGGCGAACCCGCGCCACTCCGACGCGTGA
Upstream 100 bases:
>100_bases CGAGCGGCCCGCTGGTCCGGTCGTCGTACCGCGCGGCGGAGCTGTTCCTGCGCGGCGAGATCGAGTCGAGGACGAAGCCC CGCTGACGACAGGAGCGAGC
Downstream 100 bases:
>100_bases TACAGGGGGCCGCATGCCCACCATGAACATCATCCAGGCGGTCAACGACGCGCTCCGGATCGAGATGCGCAAGGATCCGG ACGTGGTGGTGCTGGGCGAG
Product: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)
Products: NA
Alternate protein names: Branched-chain alpha-keto acid dehydrogenase E1 component alpha chain; BCKDH E1-alpha [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MRREHVVGPPTRHHPREARDYEPGRFLKEFPLHTVIREDGSADPDEVVLPDAEALRLYRWMVLNRALDERMITLQRQGRI GFYIGSIGEEATVLGTAAAMDERDWIYPCYREHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSP IATQVSQAMGGAWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTASETIAQKA IAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTSDDPRAYRPAELVEPWKRKDPILRMRRYLS RRGALDEAQDAALRDELREQIQAALKEAEAFPAKPSIETLFADVYEEPLWQQREQLAEIEAAVAADPRAANPRHSDA
Sequences:
>Translated_397_residues MRREHVVGPPTRHHPREARDYEPGRFLKEFPLHTVIREDGSADPDEVVLPDAEALRLYRWMVLNRALDERMITLQRQGRI GFYIGSIGEEATVLGTAAAMDERDWIYPCYREHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSP IATQVSQAMGGAWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTASETIAQKA IAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTSDDPRAYRPAELVEPWKRKDPILRMRRYLS RRGALDEAQDAALRDELREQIQAALKEAEAFPAKPSIETLFADVYEEPLWQQREQLAEIEAAVAADPRAANPRHSDA >Mature_397_residues MRREHVVGPPTRHHPREARDYEPGRFLKEFPLHTVIREDGSADPDEVVLPDAEALRLYRWMVLNRALDERMITLQRQGRI GFYIGSIGEEATVLGTAAAMDERDWIYPCYREHGAALLRGMPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSP IATQVSQAMGGAWAAKLKGEEMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTASETIAQKA IAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTSDDPRAYRPAELVEPWKRKDPILRMRRYLS RRGALDEAQDAALRDELREQIQAALKEAEAFPAKPSIETLFADVYEEPLWQQREQLAEIEAAVAADPRAANPRHSDA
Specific function: The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components:branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltran
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BCKDHA family [H]
Homologues:
Organism=Homo sapiens, GI11386135, Length=357, Percent_Identity=45.3781512605042, Blast_Score=286, Evalue=2e-77, Organism=Homo sapiens, GI258645172, Length=357, Percent_Identity=45.3781512605042, Blast_Score=283, Evalue=3e-76, Organism=Homo sapiens, GI4885543, Length=326, Percent_Identity=31.5950920245399, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI291084742, Length=341, Percent_Identity=31.0850439882698, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI4505685, Length=341, Percent_Identity=31.0850439882698, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI291084744, Length=348, Percent_Identity=29.8850574712644, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI291084757, Length=343, Percent_Identity=27.9883381924198, Blast_Score=104, Evalue=2e-22, Organism=Caenorhabditis elegans, GI86563355, Length=348, Percent_Identity=43.1034482758621, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI86563357, Length=348, Percent_Identity=43.1034482758621, Blast_Score=275, Evalue=3e-74, Organism=Caenorhabditis elegans, GI17536047, Length=326, Percent_Identity=31.5950920245399, Blast_Score=141, Evalue=6e-34, Organism=Caenorhabditis elegans, GI32564172, Length=326, Percent_Identity=31.5950920245399, Blast_Score=140, Evalue=8e-34, Organism=Saccharomyces cerevisiae, GI6321026, Length=319, Percent_Identity=31.3479623824451, Blast_Score=140, Evalue=2e-34, Organism=Drosophila melanogaster, GI21355903, Length=377, Percent_Identity=38.1962864721485, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24639740, Length=342, Percent_Identity=30.1169590643275, Blast_Score=125, Evalue=5e-29, Organism=Drosophila melanogaster, GI24639744, Length=342, Percent_Identity=30.1169590643275, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI28571106, Length=342, Percent_Identity=30.1169590643275, Blast_Score=125, Evalue=6e-29, Organism=Drosophila melanogaster, GI24639746, Length=283, Percent_Identity=30.0353356890459, Blast_Score=117, Evalue=1e-26, Organism=Drosophila melanogaster, GI24639748, Length=327, Percent_Identity=28.1345565749235, Blast_Score=113, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: =1.2.4.4 [H]
Molecular weight: Translated: 44394; Mature: 44394
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRREHVVGPPTRHHPREARDYEPGRFLKEFPLHTVIREDGSADPDEVVLPDAEALRLYRW CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCEECCCHHHHHHHHH MVLNRALDERMITLQRQGRIGFYIGSIGEEATVLGTAAAMDERDWIYPCYREHGAALLRG HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHC MPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSPIATQVSQAMGGAWAAKLKGE CHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHEEEECCC EMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTASETIAQKA EEEEEEEECCCCCCCHHHHCCCCHHEEECCCEEEEEECCCEEEECCHHHHHHHHHHHHHH IAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTSDDPRAYRPA HHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHEEEHEEEECCCCCCCCCCCCCCH ELVEPWKRKDPILRMRRYLSRRGALDEAQDAALRDELREQIQAALKEAEAFPAKPSIETL HHHCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FADVYEEPLWQQREQLAEIEAAVAADPRAANPRHSDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRREHVVGPPTRHHPREARDYEPGRFLKEFPLHTVIREDGSADPDEVVLPDAEALRLYRW CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHCCCCCCCCCEECCCHHHHHHHHH MVLNRALDERMITLQRQGRIGFYIGSIGEEATVLGTAAAMDERDWIYPCYREHGAALLRG HHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHC MPLVTFVCDLFGNGGDAMKGRQMPCHEAWRPGRFTSISSPIATQVSQAMGGAWAAKLKGE CHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHCCHHEEEECCC EMVAITYFGEGATSAHDFHTGLNFAAVRKIPVVFVCRNNGWAISVPRERQTASETIAQKA EEEEEEEECCCCCCCHHHHCCCCHHEEECCCEEEEEECCCEEEECCHHHHHHHHHHHHHH IAYGMRGERVDGNDLLAVYAATRRARARAAAGEGPTLLECVTYRIEGHSTSDDPRAYRPA HHHCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCHHEEEHEEEECCCCCCCCCCCCCCH ELVEPWKRKDPILRMRRYLSRRGALDEAQDAALRDELREQIQAALKEAEAFPAKPSIETL HHHCCHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FADVYEEPLWQQREQLAEIEAAVAADPRAANPRHSDA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8504804; 8969508; 9384377 [H]