| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is nuoI1 [H]
Identifier: 220916491
GI number: 220916491
Start: 1550242
End: 1550961
Strand: Direct
Name: nuoI1 [H]
Synonym: A2cp1_1385
Alternate gene names: 220916491
Gene position: 1550242-1550961 (Clockwise)
Preceding gene: 220916490
Following gene: 220916492
Centisome position: 30.82
GC content: 70.83
Gene sequence:
>720_bases ATGCCCTACCAGCTCGAGAACCGCCCGCCGGACCTGCGCGAGTCGATGTACTTCCCGGAGATCATCCGGGGCATCGGCAC GATCACGAAGCACTTCCTGAAGAACCTGTTCTTCTCGCGCGACGCGAACCCGGACATCCTCGCCCGCAAGCGCGGGGGCT TCGGGCACTCGGACAACGTCACGCTGCAGTACCCGGAGGAGCGGGCGCCCTACGCGCCGGCCTACCGCGGGCTGCACCGG CTGGTGCCGCGCGAGGACGGGAAGCCGCGCTGCGTCGCCTGCTACATGTGCGCGACGATCTGCCCGGCGCAGTGCATCTA CATCGAGGCCGCCGAGTACCCGGACGATCCGGTCGAGAAGTACCCCGCGAAGTTCGTGATCGACGAGCTGCGCTGCATCG TGTGCGGCTTCTGCGTGGAGGCCTGCCCGAAGGACGCCATCCGCATGGACTCCGGCGAGCACACGCCGCCGTCCTACGAG CGCTCGGCGCAGATCTGGGACGAGAAGCGGCTGCTCCGCGGGCCGCCGGTGTCGTACCAGTACGACCCGTGGCTGCGCCG CGGCTCGCCGTCCATCCCGCCCGACAAGCTCGAGGAGATGCGCGCCCGCGCGAAGCCGTTCCCGACGGTGGCGACCGACG AGGCCAGCCAGACGCCGGGGTTCTCGGTGCGGGCGCTCGCGGCCGAGGCCAGGGACCGGGCGCAGGCGGCCCGCAAGTAG
Upstream 100 bases:
>100_bases ACCATCGTCGTCATCGCCGTCCTCACCGCCGCGGTCGGCCGCGCGCCCGCCCCCGCGGCGGGACACGGCGCCGCCCACGC CGCCGCCGGACACTGACGCC
Downstream 100 bases:
>100_bases GTCCGGTCCGGCCGTCCCGAGGCCCCGCCCGCCGGCTCCGGCGGCGGGGCCTCCGTGCGTCCGGGAGGGAGGCGCCTTGA CGCGGGCGATCACCAGGGCG
Product: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Products: NA
Alternate protein names: NADH dehydrogenase I subunit I 1; NDH-1 subunit I 1 [H]
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MPYQLENRPPDLRESMYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNVTLQYPEERAPYAPAYRGLHR LVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYE RSAQIWDEKRLLRGPPVSYQYDPWLRRGSPSIPPDKLEEMRARAKPFPTVATDEASQTPGFSVRALAAEARDRAQAARK
Sequences:
>Translated_239_residues MPYQLENRPPDLRESMYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNVTLQYPEERAPYAPAYRGLHR LVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYE RSAQIWDEKRLLRGPPVSYQYDPWLRRGSPSIPPDKLEEMRARAKPFPTVATDEASQTPGFSVRALAAEARDRAQAARK >Mature_238_residues PYQLENRPPDLRESMYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNVTLQYPEERAPYAPAYRGLHRL VPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEKYPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYER SAQIWDEKRLLRGPPVSYQYDPWLRRGSPSIPPDKLEEMRARAKPFPTVATDEASQTPGFSVRALAAEARDRAQAARK
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1143
COG function: function code C; Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI4505371, Length=183, Percent_Identity=30.0546448087432, Blast_Score=84, Evalue=1e-16, Organism=Escherichia coli, GI1788617, Length=147, Percent_Identity=36.734693877551, Blast_Score=83, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17555194, Length=166, Percent_Identity=32.5301204819277, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI17864306, Length=183, Percent_Identity=31.6939890710383, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR010226 [H]
Pfam domain/function: PF00037 Fer4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 27168; Mature: 27037
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYQLENRPPDLRESMYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNV CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCE TLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEK EEECCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH YPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERSAQIWDEKRLLRGPPVSYQ HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC YDPWLRRGSPSIPPDKLEEMRARAKPFPTVATDEASQTPGFSVRALAAEARDRAQAARK CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PYQLENRPPDLRESMYFPEIIRGIGTITKHFLKNLFFSRDANPDILARKRGGFGHSDNV CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCE TLQYPEERAPYAPAYRGLHRLVPREDGKPRCVACYMCATICPAQCIYIEAAEYPDDPVEK EEECCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH YPAKFVIDELRCIVCGFCVEACPKDAIRMDSGEHTPPSYERSAQIWDEKRLLRGPPVSYQ HHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC YDPWLRRGSPSIPPDKLEEMRARAKPFPTVATDEASQTPGFSVRALAAEARDRAQAARK CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA