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The map label for this gene is tapC [H]

Identifier: 220915777

GI number: 220915777

Start: 732726

End: 733979

Strand: Direct

Name: tapC [H]

Synonym: A2cp1_0658

Alternate gene names: 220915777

Gene position: 732726-733979 (Clockwise)

Preceding gene: 220915776

Following gene: 220915778

Centisome position: 14.57

GC content: 66.83

Gene sequence:

>1254_bases
ATGGCCCAGGCCGCAGCCGCGAACGTGAAGACCCGGGCAGCCACGCCGGCCAAGGTGTGGAAGTGGTCCGGCAAGACCCG
GCAGGGCGAGGTGCGCTCCGGCGAGATGGAGGCACAGGACGCGGCCGCGGTGCAGGCCCGCCTCCGGCAGATGGGCATCG
AGCCGGAAAAGGTCCGCCGCAAGCCCAAGGAGATCCAGCTCAAGATCCCCGGGATGGGCGGCGTCACGACCAAGGACCTC
CTGGTCTTCACCCGCCAGTTCTCGGTGATGATCGACGCCGGCCTCCCGCTGGTGCAGGCCCTCGACATCATCGCCACCCA
GGCGGACAACCCCGAGTTCCGCAGGGTCCTCTCGACCGTCAAGGTCAAGGTCGAGTCCGGCTCGACCTTCGCGGACGCGC
TCGGCGAGCACCCCAAGGTCTTCGACGAGCTGTTCGTCCAGCTCGTGCGCGCCGGCGAGATCGGCGGCATCCTCGACACC
ATCCTCCAGCGCCTCGGCGCCTACATCGAGAAGAACGAGAAGCTGAGCCGCCGGGTGAAGGGCGCCATGGTGTACCCGGC
CATCGTGCTCACGGTCGCGGTCGGCGTGGTGGCGGTCCTGATCGCGTTCGTGGTCCCGACGTTCGAGAAGATGTTCAAGG
ACTTCGGCGGCGCCATGCCGGCCCCGACGCAGTTCCTCATCGACATCTCGCACGGGTTCCGGAACTACTGGTTCGTCTAC
GTCGGCGTGCCGGTCGCGCTGTTCGTGGCGTTCAAGACGGCGACACGGAAAGGCCGCGGGCAGGAGATCTGGCACGACAC
GGTGCTCAAGTTGCCGGTGTTCGGGCCGCTCGTCCGCAAGGTAGCGGTGGCGCGCTTCACGCGCACGCTCGGCACGATGC
TGTCCTCGGGCGTGCCCATCCTCGACGCGCTCGAGATCGTCGCGAAGTCGGCGGGCAACCGGACCATCGAGCGGGGCATC
CTGTACGTCCGCGCCAAGATCTCCGAGGGCAAGAACATCGCCGGTCCACTGGCCGAGACCAAGGTGTTCCCTGCGATGGT
CGTGCAGATGATCGGCGTGGGCGAGGCGACCGGCGCCATGGACGCCATGCTCAACAAGATCGCCGACTTCTACGACGACG
AGGTGGACGTCGCGGTCGGCGCGCTCACCAGCATGATCGAGCCGCTGATGATGGTGTTCCTGGGCGGCACGGTCGGCTTC
TTCATGATCGCGATGTACATGCCGATCTTCAACATCGCCGGGACCATCAAGTAG

Upstream 100 bases:

>100_bases
TGCGCGGGCCGCCGCAAGGTGCGGCGCGGTAGCAGCCCCGGATTCGACCCGATCCCACCCCCGCGCTAGGATGCGGGAGC
CGTCGCTTCGTGAGGAGACC

Downstream 100 bases:

>100_bases
CCGAGTACGGATGAGCGGATCCGGGGCAGAGCCGGGGCTGCACCGAAAGCTCGTCTGGCTCACGTTCTTCCGCCTGGTGA
CCGTGACCGTGCTGCTCGGC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MAQAAAANVKTRAATPAKVWKWSGKTRQGEVRSGEMEAQDAAAVQARLRQMGIEPEKVRRKPKEIQLKIPGMGGVTTKDL
LVFTRQFSVMIDAGLPLVQALDIIATQADNPEFRRVLSTVKVKVESGSTFADALGEHPKVFDELFVQLVRAGEIGGILDT
ILQRLGAYIEKNEKLSRRVKGAMVYPAIVLTVAVGVVAVLIAFVVPTFEKMFKDFGGAMPAPTQFLIDISHGFRNYWFVY
VGVPVALFVAFKTATRKGRGQEIWHDTVLKLPVFGPLVRKVAVARFTRTLGTMLSSGVPILDALEIVAKSAGNRTIERGI
LYVRAKISEGKNIAGPLAETKVFPAMVVQMIGVGEATGAMDAMLNKIADFYDDEVDVAVGALTSMIEPLMMVFLGGTVGF
FMIAMYMPIFNIAGTIK

Sequences:

>Translated_417_residues
MAQAAAANVKTRAATPAKVWKWSGKTRQGEVRSGEMEAQDAAAVQARLRQMGIEPEKVRRKPKEIQLKIPGMGGVTTKDL
LVFTRQFSVMIDAGLPLVQALDIIATQADNPEFRRVLSTVKVKVESGSTFADALGEHPKVFDELFVQLVRAGEIGGILDT
ILQRLGAYIEKNEKLSRRVKGAMVYPAIVLTVAVGVVAVLIAFVVPTFEKMFKDFGGAMPAPTQFLIDISHGFRNYWFVY
VGVPVALFVAFKTATRKGRGQEIWHDTVLKLPVFGPLVRKVAVARFTRTLGTMLSSGVPILDALEIVAKSAGNRTIERGI
LYVRAKISEGKNIAGPLAETKVFPAMVVQMIGVGEATGAMDAMLNKIADFYDDEVDVAVGALTSMIEPLMMVFLGGTVGF
FMIAMYMPIFNIAGTIK
>Mature_416_residues
AQAAAANVKTRAATPAKVWKWSGKTRQGEVRSGEMEAQDAAAVQARLRQMGIEPEKVRRKPKEIQLKIPGMGGVTTKDLL
VFTRQFSVMIDAGLPLVQALDIIATQADNPEFRRVLSTVKVKVESGSTFADALGEHPKVFDELFVQLVRAGEIGGILDTI
LQRLGAYIEKNEKLSRRVKGAMVYPAIVLTVAVGVVAVLIAFVVPTFEKMFKDFGGAMPAPTQFLIDISHGFRNYWFVYV
GVPVALFVAFKTATRKGRGQEIWHDTVLKLPVFGPLVRKVAVARFTRTLGTMLSSGVPILDALEIVAKSAGNRTIERGIL
YVRAKISEGKNIAGPLAETKVFPAMVVQMIGVGEATGAMDAMLNKIADFYDDEVDVAVGALTSMIEPLMMVFLGGTVGFF
MIAMYMPIFNIAGTIK

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=407, Percent_Identity=27.027027027027, Blast_Score=199, Evalue=4e-52,
Organism=Escherichia coli, GI1786295, Length=396, Percent_Identity=26.2626262626263, Blast_Score=160, Evalue=2e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 45327; Mature: 45196

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQAAAANVKTRAATPAKVWKWSGKTRQGEVRSGEMEAQDAAAVQARLRQMGIEPEKVRR
CCCCHHCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHC
KPKEIQLKIPGMGGVTTKDLLVFTRQFSVMIDAGLPLVQALDIIATQADNPEFRRVLSTV
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
KVKVESGSTFADALGEHPKVFDELFVQLVRAGEIGGILDTILQRLGAYIEKNEKLSRRVK
HEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
GAMVYPAIVLTVAVGVVAVLIAFVVPTFEKMFKDFGGAMPAPTQFLIDISHGFRNYWFVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE
VGVPVALFVAFKTATRKGRGQEIWHDTVLKLPVFGPLVRKVAVARFTRTLGTMLSSGVPI
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
LDALEIVAKSAGNRTIERGILYVRAKISEGKNIAGPLAETKVFPAMVVQMIGVGEATGAM
HHHHHHHHHHCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
DAMLNKIADFYDDEVDVAVGALTSMIEPLMMVFLGGTVGFFMIAMYMPIFNIAGTIK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AQAAAANVKTRAATPAKVWKWSGKTRQGEVRSGEMEAQDAAAVQARLRQMGIEPEKVRR
CCCHHCCCHHCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHC
KPKEIQLKIPGMGGVTTKDLLVFTRQFSVMIDAGLPLVQALDIIATQADNPEFRRVLSTV
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHH
KVKVESGSTFADALGEHPKVFDELFVQLVRAGEIGGILDTILQRLGAYIEKNEKLSRRVK
HEEECCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
GAMVYPAIVLTVAVGVVAVLIAFVVPTFEKMFKDFGGAMPAPTQFLIDISHGFRNYWFVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEE
VGVPVALFVAFKTATRKGRGQEIWHDTVLKLPVFGPLVRKVAVARFTRTLGTMLSSGVPI
EHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH
LDALEIVAKSAGNRTIERGILYVRAKISEGKNIAGPLAETKVFPAMVVQMIGVGEATGAM
HHHHHHHHHHCCCHHHHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
DAMLNKIADFYDDEVDVAVGALTSMIEPLMMVFLGGTVGFFMIAMYMPIFNIAGTIK
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]