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The map label for this gene is 220915439

Identifier: 220915439

GI number: 220915439

Start: 355974

End: 356567

Strand: Direct

Name: 220915439

Synonym: A2cp1_0318

Alternate gene names: NA

Gene position: 355974-356567 (Clockwise)

Preceding gene: 220915438

Following gene: 220915440

Centisome position: 7.08

GC content: 76.43

Gene sequence:

>594_bases
GTGATCGCGTACACTGCGCGCGTGCGCCTGCTCCGCTCTCCCACCGACCCGCGCTGGATCGACGTCGCGCTCGCGGAGCT
GGATCGCACGCTGCAGGACCACGCGCACTGCGAGAAGAAGGCCGCGGCCAGCGCGCTCAAGCTGGTGGCGGACCACCCCG
AGCGCGCCGGGATGGTGCGGGCGCTCGCGAAGCTCGCGCAGGAGGAGCTGCAGCACTTCCTGGGGGTGCTGGCCGAGCTG
GGCCGGCGAGGCACGGCGCTGCCGCCCGACGACGGCGATCCGTACGCGCAGGCGCTGCTGCGCCACGTGCGCGGCGGGCC
ACGGCCCGAGGACCGGCTGGTGGACCGCCTGCTGGTCGCCGCGCTCATCGAGGCGCGCAGCTGCGAGCGCCTGTGGCTGC
TCGCCGGCGCGCTGCCCGAGGCGCGGCTGCGGGAGCTCTACGCCCGGCTGGCGCAGTCGGAGGCCGGCCATGAGCGGCTG
TTCGTGGACCTGGCGCGCGAGGTGGACGCCGCGGCGGACGCGCGGCTCGAGGTGCTCGCCGAGGAGGAGGCGCGGGTGGT
GGCGGCCCTGCCGCTGCTGCCCCGCATCCACTGA

Upstream 100 bases:

>100_bases
CCGCGTGTACCCCTCGGGAGCTGGTCGGCCGCTTCTCGATGGCGCGGCTGCCGCGCGAACCCGCCGTCCTCTCCCCGGAA
CGGATCGCGGCGCTCCTCCC

Downstream 100 bases:

>100_bases
TGGCACCCGACGCGTCAGCGCCGCCCGCGGCCCCCGGCCCCGGTGACGCGCCGCGCCCCGGGCGCAGGGCGCCGTGGGGT
GGCGTCGCCGCGGCCGCGGC

Product: tRNA-hydroxylase

Products: NA

Alternate protein names: TRNA-(MS[2]IO[6]A)-Hydroxylase; TRNA-(Ms(2)Io(6)A)-Hydroxylase; TRNA-(Ms[2]Io[6]A)-Hydroxylase; TRNA-(MS[2]IO[6]A)-Hydroxylase Subfamily; TRNA-(MS(2)IO(6)A)-Hydroxylase-Like; TRNA-(MS[2]IO[6]A)-Hydroxylase-Like Protein; tRNA Hydroxylase; Probably TRNA-(MS[2]IO[6]A)-Hydroxylase; TRNA-(MS(2)IO(6)A)-Hydroxylase; Hydroxylase; tRNA Hydroxylase-Like Protein

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MIAYTARVRLLRSPTDPRWIDVALAELDRTLQDHAHCEKKAAASALKLVADHPERAGMVRALAKLAQEELQHFLGVLAEL
GRRGTALPPDDGDPYAQALLRHVRGGPRPEDRLVDRLLVAALIEARSCERLWLLAGALPEARLRELYARLAQSEAGHERL
FVDLAREVDAAADARLEVLAEEEARVVAALPLLPRIH

Sequences:

>Translated_197_residues
MIAYTARVRLLRSPTDPRWIDVALAELDRTLQDHAHCEKKAAASALKLVADHPERAGMVRALAKLAQEELQHFLGVLAEL
GRRGTALPPDDGDPYAQALLRHVRGGPRPEDRLVDRLLVAALIEARSCERLWLLAGALPEARLRELYARLAQSEAGHERL
FVDLAREVDAAADARLEVLAEEEARVVAALPLLPRIH
>Mature_197_residues
MIAYTARVRLLRSPTDPRWIDVALAELDRTLQDHAHCEKKAAASALKLVADHPERAGMVRALAKLAQEELQHFLGVLAEL
GRRGTALPPDDGDPYAQALLRHVRGGPRPEDRLVDRLLVAALIEARSCERLWLLAGALPEARLRELYARLAQSEAGHERL
FVDLAREVDAAADARLEVLAEEEARVVAALPLLPRIH

Specific function: Unknown

COG id: COG4445

COG function: function code FJ; Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21807; Mature: 21807

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAYTARVRLLRSPTDPRWIDVALAELDRTLQDHAHCEKKAAASALKLVADHPERAGMVR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ALAKLAQEELQHFLGVLAELGRRGTALPPDDGDPYAQALLRHVRGGPRPEDRLVDRLLVA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALIEARSCERLWLLAGALPEARLRELYARLAQSEAGHERLFVDLAREVDAAADARLEVLA
HHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EEEARVVAALPLLPRIH
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIAYTARVRLLRSPTDPRWIDVALAELDRTLQDHAHCEKKAAASALKLVADHPERAGMVR
CCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
ALAKLAQEELQHFLGVLAELGRRGTALPPDDGDPYAQALLRHVRGGPRPEDRLVDRLLVA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHH
ALIEARSCERLWLLAGALPEARLRELYARLAQSEAGHERLFVDLAREVDAAADARLEVLA
HHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EEEARVVAALPLLPRIH
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA