| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is gluQ [H]
Identifier: 220915438
GI number: 220915438
Start: 355006
End: 355977
Strand: Direct
Name: gluQ [H]
Synonym: A2cp1_0317
Alternate gene names: 220915438
Gene position: 355006-355977 (Clockwise)
Preceding gene: 220915431
Following gene: 220915439
Centisome position: 7.06
GC content: 79.42
Gene sequence:
>972_bases GTGTCCAGCCGCGGCCGCTTCGCTCCCTCCCCCACCGGACCCCTGCACCTCGGCAACGCGCGCACCGCGCTCCTGTCGTG GCTCGCCGCGCGCACCGCCGGGGCGGCCTACGTCATGCGGGTGGAGGACCTGGACGGCCCGCGCGTGCGGCCCGGCCTGG AGGCGCGGATCCTGGAGGAGCTGCGCTGGCTCGGCCTGGACTGGGACGAGGGGCCGGACGTGGGCGGGCCGCTCGGTCCC TACCGCCAGTCGGAGCGCCTGCCGCGGTACGGCGCCGCGCTGGAGCGGCTCCGCGCCGCAGGGCTCGCCTACCCGTGCTT CTGCTCGCGCGCCGAGATCGCGGCGGCCTCGCAGGCGCCGCACGGCGCCTCGGACGAGGGGCCGCGGTACCCGGGCACCT GTCGCGAGCTCTCCCCCGCAGAGGTGGCCAGGCGCGCCGCGACGCGCCGGCCGGCCTGGCGGCTGCGCGTCGCGGCGGGC CCGGTCGCCTTCGAGGACGGCGTCCACGGCCCGGTGGCGCACGACGTCGCGGCGGAGGTGGGCGACTTCGTGATCGCGCG GGCCGACGGCGTGCCGGCGTACCAGCTCGCGGTGGTGGTCGACGACGCGGCCATGCAGGTGGGGGAGGTGGTCCGCGGCG ACGACCTCCTGCCGTCCACCGCGCGCCAGCTCCTGCTGTACCGCGCGCTGGGCGTCGCCCCGCCGCGCTTCGCGCACGTG CCGCTCGTGGTCGGCCCCGACGGCGCGCGGCTCGCGAAGCGGCACGGCGCGCTCTCGCTGGGCGAGCTCCGGGCGCGCGG CGCGGACCCGCGCGCGGTGGTCGCGCTGCTCGCCGGGCTCTCCGGCCTGGCGGCCGCCGACCCGCACGCCGCGTGTACCC CTCGGGAGCTGGTCGGCCGCTTCTCGATGGCGCGGCTGCCGCGCGAACCCGCCGTCCTCTCCCCGGAACGGATCGCGGCG CTCCTCCCGTGA
Upstream 100 bases:
>100_bases TTCGGCGCGCGGGGGCCAAGGGCAGCGGATATCATCGCAGCGCCCAACCGGCACCGCCCAACCGGCACCGCCCAACCGGC ACCGACCTCCCGGGGCACCC
Downstream 100 bases:
>100_bases TCGCGTACACTGCGCGCGTGCGCCTGCTCCGCTCTCCCACCGACCCGCGCTGGATCGACGTCGCGCTCGCGGAGCTGGAT CGCACGCTGCAGGACCACGC
Product: Glutamate--tRNA ligase
Products: AMP; diphosphate; L-glutamyl-tRNA(Glu)
Alternate protein names: Glu-Q-RSs [H]
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSSRGRFAPSPTGPLHLGNARTALLSWLAARTAGAAYVMRVEDLDGPRVRPGLEARILEELRWLGLDWDEGPDVGGPLGP YRQSERLPRYGAALERLRAAGLAYPCFCSRAEIAAASQAPHGASDEGPRYPGTCRELSPAEVARRAATRRPAWRLRVAAG PVAFEDGVHGPVAHDVAAEVGDFVIARADGVPAYQLAVVVDDAAMQVGEVVRGDDLLPSTARQLLLYRALGVAPPRFAHV PLVVGPDGARLAKRHGALSLGELRARGADPRAVVALLAGLSGLAAADPHAACTPRELVGRFSMARLPREPAVLSPERIAA LLP
Sequences:
>Translated_323_residues MSSRGRFAPSPTGPLHLGNARTALLSWLAARTAGAAYVMRVEDLDGPRVRPGLEARILEELRWLGLDWDEGPDVGGPLGP YRQSERLPRYGAALERLRAAGLAYPCFCSRAEIAAASQAPHGASDEGPRYPGTCRELSPAEVARRAATRRPAWRLRVAAG PVAFEDGVHGPVAHDVAAEVGDFVIARADGVPAYQLAVVVDDAAMQVGEVVRGDDLLPSTARQLLLYRALGVAPPRFAHV PLVVGPDGARLAKRHGALSLGELRARGADPRAVVALLAGLSGLAAADPHAACTPRELVGRFSMARLPREPAVLSPERIAA LLP >Mature_322_residues SSRGRFAPSPTGPLHLGNARTALLSWLAARTAGAAYVMRVEDLDGPRVRPGLEARILEELRWLGLDWDEGPDVGGPLGPY RQSERLPRYGAALERLRAAGLAYPCFCSRAEIAAASQAPHGASDEGPRYPGTCRELSPAEVARRAATRRPAWRLRVAAGP VAFEDGVHGPVAHDVAAEVGDFVIARADGVPAYQLAVVVDDAAMQVGEVVRGDDLLPSTARQLLLYRALGVAPPRFAHVP LVVGPDGARLAKRHGALSLGELRARGADPRAVVALLAGLSGLAAADPHAACTPRELVGRFSMARLPREPAVLSPERIAAL LP
Specific function: Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble positi
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=318, Percent_Identity=41.8238993710692, Blast_Score=238, Evalue=7e-63, Organism=Escherichia coli, GI1788743, Length=321, Percent_Identity=36.4485981308411, Blast_Score=219, Evalue=2e-58, Organism=Escherichia coli, GI226510925, Length=281, Percent_Identity=39.1459074733096, Blast_Score=157, Evalue=1e-39, Organism=Caenorhabditis elegans, GI71993394, Length=318, Percent_Identity=33.6477987421384, Blast_Score=186, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6324540, Length=330, Percent_Identity=33.030303030303, Blast_Score=183, Evalue=3e-47, Organism=Drosophila melanogaster, GI24665321, Length=325, Percent_Identity=38.1538461538462, Blast_Score=232, Evalue=2e-61,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001412 - InterPro: IPR022380 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: 6.1.1.17
Molecular weight: Translated: 34115; Mature: 33984
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSRGRFAPSPTGPLHLGNARTALLSWLAARTAGAAYVMRVEDLDGPRVRPGLEARILEE CCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH LRWLGLDWDEGPDVGGPLGPYRQSERLPRYGAALERLRAAGLAYPCFCSRAEIAAASQAP HHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCC HGASDEGPRYPGTCRELSPAEVARRAATRRPAWRLRVAAGPVAFEDGVHGPVAHDVAAEV CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCHHHHHHHHH GDFVIARADGVPAYQLAVVVDDAAMQVGEVVRGDDLLPSTARQLLLYRALGVAPPRFAHV HCEEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE PLVVGPDGARLAKRHGALSLGELRARGADPRAVVALLAGLSGLAAADPHAACTPRELVGR CEEECCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FSMARLPREPAVLSPERIAALLP HHHHHCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SSRGRFAPSPTGPLHLGNARTALLSWLAARTAGAAYVMRVEDLDGPRVRPGLEARILEE CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH LRWLGLDWDEGPDVGGPLGPYRQSERLPRYGAALERLRAAGLAYPCFCSRAEIAAASQAP HHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHCCCC HGASDEGPRYPGTCRELSPAEVARRAATRRPAWRLRVAAGPVAFEDGVHGPVAHDVAAEV CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEECCCCCCCHHHHHHHHH GDFVIARADGVPAYQLAVVVDDAAMQVGEVVRGDDLLPSTARQLLLYRALGVAPPRFAHV HCEEEEECCCCCEEEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEE PLVVGPDGARLAKRHGALSLGELRARGADPRAVVALLAGLSGLAAADPHAACTPRELVGR CEEECCCCHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH FSMARLPREPAVLSPERIAALLP HHHHHCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamate; tRNA(Glu)
Specific reaction: ATP + L-glutamate + tRNA(Glu) = AMP + diphosphate + L-glutamyl-tRNA(Glu)
General reaction: Aminoacylation; Esterification [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA