| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is pyrH [H]
Identifier: 220915423
GI number: 220915423
Start: 338149
End: 338904
Strand: Direct
Name: pyrH [H]
Synonym: A2cp1_0302
Alternate gene names: 220915423
Gene position: 338149-338904 (Clockwise)
Preceding gene: 220915422
Following gene: 220915424
Centisome position: 6.72
GC content: 66.93
Gene sequence:
>756_bases ATGGCGAGCGAGAAAGCCTCCAACGCGAAGGCCCGTTACCAGCGCATCCTGCTCAAGCTCTCGGGCGAGGCGCTCATGGG GGACGGCAAGTACGGCATCTCGCCGAAGACCCTCACCTCCATCGCCCACGACGTGAAGGACGTGGTGGACCTCGGGGTCG AGGTCGCGCTCACCATCGGCGGCGGCAACATCTTCCGCGGCGTGTCGGGCGCGACCGAGGGGATGGACCGCTCCTCGGCC GACTACATGGGCATGCTCGCGACCGTCATCAACTCGATGGCGCTGCAGGACGCGCTCGAGAAGATCGGCGTGCCCACCCG CGTGCAGTCCGCGATCGAGATGCACCAGGTCGCCGAGCCGTACATCCGCCGCCGCGCCATCCGCCACCTGGAGAAGGGGC GGGTGGTGATCTTCGCCGCCGGCACCGGCAACCCGTACTTCACCACCGACACCGCCGCCTCGCTCCGCGCCATGGAGATC CACGCGGACGTGCTGCTCAAGGCGACCAAGGTGGACGGCGTCTACACCGACGACCCGAAGAAGAACCCGGCGGCGACCAA GTTCAAGCAGCTCAGCTACATCGACGTGCTGAAGAAGAACCTCAAGGTGATGGACTCCACCGCCATCAGCCTCTGCATGG ACAACGACCTCCCCATCGTCGTGTTCGACCTCACCCAGCGCGGGAACGTGCGCAAGGTGGTGCTCGGCGAGGAGATCGGC ACCACCGTCGGGCGCCCCAGCGCCAGGAACGCGTAG
Upstream 100 bases:
>100_bases CGCCCGCCGAGGCTGGCGGGCAGGGGTGAGCGCGCGCGGGAATCCTCCGCAACACCGCCGCCTTGACCGACCCCACCGCA CCCGGTACAACCCGCCGACC
Downstream 100 bases:
>100_bases CCTCGGCAAGGAGACGGCCATGGGCACCATCGCAGACGACATCCTCGACGACCTGCACGGGCGCATCCTCAAGACGCTCG ACCAGCTCCGGACCGAGCTC
Product: uridylate kinase
Products: NA
Alternate protein names: UK; Uridine monophosphate kinase; UMP kinase; UMPK [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MASEKASNAKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIGGGNIFRGVSGATEGMDRSSA DYMGMLATVINSMALQDALEKIGVPTRVQSAIEMHQVAEPYIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEI HADVLLKATKVDGVYTDDPKKNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIVVFDLTQRGNVRKVVLGEEIG TTVGRPSARNA
Sequences:
>Translated_251_residues MASEKASNAKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIGGGNIFRGVSGATEGMDRSSA DYMGMLATVINSMALQDALEKIGVPTRVQSAIEMHQVAEPYIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEI HADVLLKATKVDGVYTDDPKKNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIVVFDLTQRGNVRKVVLGEEIG TTVGRPSARNA >Mature_250_residues ASEKASNAKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIGGGNIFRGVSGATEGMDRSSAD YMGMLATVINSMALQDALEKIGVPTRVQSAIEMHQVAEPYIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEIH ADVLLKATKVDGVYTDDPKKNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIVVFDLTQRGNVRKVVLGEEIGT TVGRPSARNA
Specific function: Catalyzes the reversible phosphorylation of UMP to UDP [H]
COG id: COG0528
COG function: function code F; Uridylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UMP kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786367, Length=238, Percent_Identity=53.3613445378151, Blast_Score=256, Evalue=7e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR011817 - InterPro: IPR015963 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.4.22 [H]
Molecular weight: Translated: 27069; Mature: 26937
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASEKASNAKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIG CCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEC GGNIFRGVSGATEGMDRSSADYMGMLATVINSMALQDALEKIGVPTRVQSAIEMHQVAEP CCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEIHADVLLKATKVDGVYTDDPK HHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHEEHHHHHEEEEECCCEECCCCC KNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIVVFDLTQRGNVRKVVLGEEIG CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCEEEEEECCHHC TTVGRPSARNA CCCCCCCCCCC >Mature Secondary Structure ASEKASNAKARYQRILLKLSGEALMGDGKYGISPKTLTSIAHDVKDVVDLGVEVALTIG CCCCCCHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEC GGNIFRGVSGATEGMDRSSADYMGMLATVINSMALQDALEKIGVPTRVQSAIEMHQVAEP CCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH YIRRRAIRHLEKGRVVIFAAGTGNPYFTTDTAASLRAMEIHADVLLKATKVDGVYTDDPK HHHHHHHHHHHCCCEEEEEECCCCCEEECCHHHHHHHHEEHHHHHEEEEECCCEECCCCC KNPAATKFKQLSYIDVLKKNLKVMDSTAISLCMDNDLPIVVFDLTQRGNVRKVVLGEEIG CCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEECCCCCEEEEEECCHHC TTVGRPSARNA CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA