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The map label for this gene is ycfF [C]

Identifier: 220915322

GI number: 220915322

Start: 222190

End: 222534

Strand: Direct

Name: ycfF [C]

Synonym: A2cp1_0201

Alternate gene names: 220915322

Gene position: 222190-222534 (Clockwise)

Preceding gene: 220915321

Following gene: 220915324

Centisome position: 4.42

GC content: 71.88

Gene sequence:

>345_bases
ATGAGCGACTGCCTGTTCTGCAGGATCGTGCGGGGCGAGATCCCCGCCAAGCTGGTGCACCAGGACGCCGACACGGTGGC
GTTCGTGGACATCAACCCGCAGGCGCCCACGCACCTGCTCGTCATCCCGCGCAAGCACATCCCCACCGCGAACGACCTCG
CCCCCGAGGACGAGGCGCTCATGGGGAAGCTGTACCGGGTGGCGGCGGCGCTCGCGAAGGAGCGCGGGATCGACGGCTCC
GGCTGGCGCGCGGTCGTGAACACGCACGGCGACGCCGGCCAGACCGTGTTCCACGTGCACCTGCACCTGCTGGGCGGCCG
CCGCATGGGCTGGCCGCCCGGGTAG

Upstream 100 bases:

>100_bases
GACCGGGGTGTTCCGCGCCGAGATGGAGGTCGAGCTGGTGAACGACGGTCCGGTCACCATCCTGCTCGACTCGCGGCGGC
TGTTCTAGAGAGGGCGACCG

Downstream 100 bases:

>100_bases
GCGCGTTCACGTTGCGTCAAGGCGCCGGCGCCGCGCCCTGGCGCGCCAGCCGGTTCGCCGCGGCCGCGGAGCGCGCGGCG
TTCGCGAGCAGGAGCCGCGC

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSDCLFCRIVRGEIPAKLVHQDADTVAFVDINPQAPTHLLVIPRKHIPTANDLAPEDEALMGKLYRVAAALAKERGIDGS
GWRAVVNTHGDAGQTVFHVHLHLLGGRRMGWPPG

Sequences:

>Translated_114_residues
MSDCLFCRIVRGEIPAKLVHQDADTVAFVDINPQAPTHLLVIPRKHIPTANDLAPEDEALMGKLYRVAAALAKERGIDGS
GWRAVVNTHGDAGQTVFHVHLHLLGGRRMGWPPG
>Mature_113_residues
SDCLFCRIVRGEIPAKLVHQDADTVAFVDINPQAPTHLLVIPRKHIPTANDLAPEDEALMGKLYRVAAALAKERGIDGSG
WRAVVNTHGDAGQTVFHVHLHLLGGRRMGWPPG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=112, Percent_Identity=51.7857142857143, Blast_Score=122, Evalue=9e-29,
Organism=Homo sapiens, GI14211923, Length=111, Percent_Identity=43.2432432432432, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=47.7064220183486, Blast_Score=104, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=48.6725663716814, Blast_Score=122, Evalue=5e-29,
Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=34.7826086956522, Blast_Score=64, Evalue=5e-12,
Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=48.6725663716814, Blast_Score=112, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=48.6725663716814, Blast_Score=112, Evalue=7e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12404; Mature: 12273

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCLFCRIVRGEIPAKLVHQDADTVAFVDINPQAPTHLLVIPRKHIPTANDLAPEDEAL
CCCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHH
MGKLYRVAAALAKERGIDGSGWRAVVNTHGDAGQTVFHVHLHLLGGRRMGWPPG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
SDCLFCRIVRGEIPAKLVHQDADTVAFVDINPQAPTHLLVIPRKHIPTANDLAPEDEAL
CCCEEEEEECCCCCHHHHCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHH
MGKLYRVAAALAKERGIDGSGWRAVVNTHGDAGQTVFHVHLHLLGGRRMGWPPG
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]