| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is mutL [H]
Identifier: 220905580
GI number: 220905580
Start: 2788254
End: 2790473
Strand: Reverse
Name: mutL [H]
Synonym: Ddes_2319
Alternate gene names: 220905580
Gene position: 2790473-2788254 (Counterclockwise)
Preceding gene: 220905582
Following gene: 220905579
Centisome position: 97.11
GC content: 64.46
Gene sequence:
>2220_bases ATGCCGCACATGGGCGCATACACTGAAACCATGTCTGAAAAAAATAGTCATATACGCCTGCTGCCACCCGAGCTGCGCAA CCAGATCGCCGCCGGCGAGGTGGTTGAACGGCCCGCCAGCGTGTTGAAAGAACTGGTGGAAAACAGCCTGGACGCCCAGG CCGGCCAGATTGATGTTTGCCTTGAAAATGGGGGGCAAAGCCGCATCAGTGTACAGGATGATGGCCGGGGCATCCCTGCG GAAGATCTGGAGATGGCCGTCACACGTCATGCCACCAGCAAGATACGGTGCCTGGAGGACCTTGAACGCATCCTTTCTTA CGGCTTTCGGGGCGAGGCCTTGCCGAGCATCGCCTCGGTATCGCGCTTTACCATCACTTCAGCCAGCCAGGACGCTGCGG GACAGGCCGCGGCACACCGGGTAGAGGTGGAACATGGCCTGCTCAAAAGCTCCGGCCCGGCGGCCCTGCACAAGGGCACG CTGGTGGAAGTGCGTGATCTTTTTTCCAACATACCAGCCCGGCTGAAGTTTTTAAAGACCCCCTCCACAGAGTTCAGGCG CGCTCAGGACTGGCTGGCCCGTCTGGCCCTGACACGTCCGCAGGTGGGTTTTTGCCTGTATTCGGGTGAGAGGGAAGCCC TGCGGTTTCTGCCGGGGCAAACCCTTGCCGAGCGCCTTGCCGTGCTGTGGCCGCGCCTCATCGTGGATGCCCTGCGCCCC TTTGACGGGCGGCGGCATGGCATCCGCGCGCATGGTCTGGCGGCCCTGCCCAATGTGAGCCAGCCGCGTGGCGACCGCAT CCTTTTGTATGTCAACGGCCGCTCGGTGACGGACAAGCGCCTGCTGGCCGCCGTGCGCCAGGCCTACAAAGGGCGTATGA CCAGCAGGGACTACCCGCAGATTGCCCTTTTTGTCGAAATGGACCCGGCCGAGGTGGATGTGAACGTGCACCCGGCCAAA AGCGAGGTGCGGTTCAGGGATGAATCCGCGGTGTTTTCCGCGGTGCTGCACGCCGTGCAAGGGGCGCTTGTAACATCGTT TGACGTGGCCGAGGCCGCCTGGCACGAAGGGGCAACGCCTGCCGCTGACGGCAGGGCGTATGGTCAGGCCGGTTCGCCCG CTTCAGATTCGCCCGCTTCAGATTCGTCTGGTACTTTCGGTTCTCCTGACAAGTCTTATGCTCCGGGCGCGGACCCGGGG GACCCGGGGGACCCGGCGGGTGCCGCGCCCCGTCCGCAGGGATTCTGGGGGCGGCTGGATAATCCCCCGCTTGTGGAGCG GCAGGAGCGGGACAGTGCCGCTGACCAGGGCGAATGGCATGTGAGCGCGCCCGCCGCATCTGTGGAAGGAGAGGCCGGGC ATGCCACGTACGGCACTTTGCCGGGATTTACCGGCCGGGCTGGCTTGTCCGCTCCATCTGGGCTGCCTGGCCCGGATGGC GCTTCTGATGCGTCCGTTTTTGGTGCGCAGTTTTCTTCTTCGTCTGCCCCTGCGGGAAGCGCCGGTCTGGCCGCTGCCGC GCAGGAAGGTTTTTTTCTGGAGCAGGAAGACGCCGCCTGCGGCCGCATGGCGGAAGACAGCGGCACATATGCCGCCGGTG CAGGCGATGCAGCGGATGACCGGGGTGATGTCGCTGCCGGGCATGGCGGAAGCCGTCAGCCCCTGCGCGTTGAAAATATG GAATACCTGGGGCAGGTGGCAAATACCTATCTGGTGCTGCGCGACAGGGACGGCGCCCTGATCCTGCTGGACCAGCACGC GGCCCATGAGCGTGTGCTCTATACCCGCATGCGCCGGGGCGGCTTTGCCGGCTCCGGGCAGCTGCTGGCCCTGCCGCTGG AACTGTCGCTGCATCCGGCGGAGCGCGAGCGGCTGTTTGAGCTGCGGGAAAATCTGGAATCCCTGGGTTTTGTCTTTGAA AGTTCCGGCGCGGGGCTTGAGGTCAGGGGCATGCCGCCCGTGCTTTCGCGGGCCGAGGCCAGAGATTTTCTGCGTGAAGC GCTGGCCGGGCGCAAGGACGATCTGGCGGGCATGTTTATTTCCATGTCCTGCAAGGCGGCCATCAAGGCCGGGCAGCGCC TTACGGATGATGAGGCCGCCGGGCTGCTGCGCCAGTGGCTTGCGGCTCCGGACAGGGAATACTGCCCGCACGGGCGTCCC TGCGTACTGCGCTGGGATGGCCCTGAGCTGGAAAAAATGTTCAAGCGGCGGCAATCCTGA
Upstream 100 bases:
>100_bases TTTTCAGCCTTGCCTTCCATACATAAGCACCCCTGGCGGCAAGGCAAGCCCTGCGGCGCCTTGCGGGGGTGTTTTTTCCC GGCCTGCGCCGCCGCTTGCC
Downstream 100 bases:
>100_bases TGCTTGGTCCCCACTCCGGTCTCTGTCGCAGGGTGAAGAGAGCCTGAAACCGCTTGCGGGAACATACTGCACTGACGCCG TGGGTGCACGGGCCAGTACC
Product: DNA mismatch repair protein MutL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 739; Mature: 738
Protein sequence:
>739_residues MPHMGAYTETMSEKNSHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVCLENGGQSRISVQDDGRGIPA EDLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASVSRFTITSASQDAAGQAAAHRVEVEHGLLKSSGPAALHKGT LVEVRDLFSNIPARLKFLKTPSTEFRRAQDWLARLALTRPQVGFCLYSGEREALRFLPGQTLAERLAVLWPRLIVDALRP FDGRRHGIRAHGLAALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQIALFVEMDPAEVDVNVHPAK SEVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATPAADGRAYGQAGSPASDSPASDSSGTFGSPDKSYAPGADPG DPGDPAGAAPRPQGFWGRLDNPPLVERQERDSAADQGEWHVSAPAASVEGEAGHATYGTLPGFTGRAGLSAPSGLPGPDG ASDASVFGAQFSSSSAPAGSAGLAAAAQEGFFLEQEDAACGRMAEDSGTYAAGAGDAADDRGDVAAGHGGSRQPLRVENM EYLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRGGFAGSGQLLALPLELSLHPAERERLFELRENLESLGFVFE SSGAGLEVRGMPPVLSRAEARDFLREALAGRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRP CVLRWDGPELEKMFKRRQS
Sequences:
>Translated_739_residues MPHMGAYTETMSEKNSHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVCLENGGQSRISVQDDGRGIPA EDLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASVSRFTITSASQDAAGQAAAHRVEVEHGLLKSSGPAALHKGT LVEVRDLFSNIPARLKFLKTPSTEFRRAQDWLARLALTRPQVGFCLYSGEREALRFLPGQTLAERLAVLWPRLIVDALRP FDGRRHGIRAHGLAALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQIALFVEMDPAEVDVNVHPAK SEVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATPAADGRAYGQAGSPASDSPASDSSGTFGSPDKSYAPGADPG DPGDPAGAAPRPQGFWGRLDNPPLVERQERDSAADQGEWHVSAPAASVEGEAGHATYGTLPGFTGRAGLSAPSGLPGPDG ASDASVFGAQFSSSSAPAGSAGLAAAAQEGFFLEQEDAACGRMAEDSGTYAAGAGDAADDRGDVAAGHGGSRQPLRVENM EYLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRGGFAGSGQLLALPLELSLHPAERERLFELRENLESLGFVFE SSGAGLEVRGMPPVLSRAEARDFLREALAGRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRP CVLRWDGPELEKMFKRRQS >Mature_738_residues PHMGAYTETMSEKNSHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVCLENGGQSRISVQDDGRGIPAE DLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASVSRFTITSASQDAAGQAAAHRVEVEHGLLKSSGPAALHKGTL VEVRDLFSNIPARLKFLKTPSTEFRRAQDWLARLALTRPQVGFCLYSGEREALRFLPGQTLAERLAVLWPRLIVDALRPF DGRRHGIRAHGLAALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQIALFVEMDPAEVDVNVHPAKS EVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATPAADGRAYGQAGSPASDSPASDSSGTFGSPDKSYAPGADPGD PGDPAGAAPRPQGFWGRLDNPPLVERQERDSAADQGEWHVSAPAASVEGEAGHATYGTLPGFTGRAGLSAPSGLPGPDGA SDASVFGAQFSSSSAPAGSAGLAAAAQEGFFLEQEDAACGRMAEDSGTYAAGAGDAADDRGDVAAGHGGSRQPLRVENME YLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRGGFAGSGQLLALPLELSLHPAERERLFELRENLESLGFVFES SGAGLEVRGMPPVLSRAEARDFLREALAGRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRPC VLRWDGPELEKMFKRRQS
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=334, Percent_Identity=35.0299401197605, Blast_Score=191, Evalue=3e-48, Organism=Homo sapiens, GI189458898, Length=383, Percent_Identity=27.9373368146214, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI189458896, Length=374, Percent_Identity=29.4117647058824, Blast_Score=149, Evalue=1e-35, Organism=Homo sapiens, GI4505911, Length=383, Percent_Identity=27.9373368146214, Blast_Score=148, Evalue=2e-35, Organism=Homo sapiens, GI4505913, Length=350, Percent_Identity=28.2857142857143, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI310128478, Length=350, Percent_Identity=28.2857142857143, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI263191589, Length=240, Percent_Identity=29.5833333333333, Blast_Score=98, Evalue=4e-20, Organism=Homo sapiens, GI310128480, Length=316, Percent_Identity=25.6329113924051, Blast_Score=91, Evalue=4e-18, Organism=Homo sapiens, GI91992162, Length=352, Percent_Identity=23.5795454545455, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI91992160, Length=352, Percent_Identity=23.5795454545455, Blast_Score=82, Evalue=2e-15, Organism=Escherichia coli, GI1790612, Length=340, Percent_Identity=44.1176470588235, Blast_Score=233, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71991825, Length=319, Percent_Identity=33.8557993730408, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17562796, Length=425, Percent_Identity=25.6470588235294, Blast_Score=125, Evalue=1e-28, Organism=Saccharomyces cerevisiae, GI6323819, Length=339, Percent_Identity=34.5132743362832, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6324247, Length=399, Percent_Identity=26.3157894736842, Blast_Score=125, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6325093, Length=201, Percent_Identity=29.3532338308458, Blast_Score=89, Evalue=4e-18, Organism=Drosophila melanogaster, GI17136968, Length=334, Percent_Identity=35.0299401197605, Blast_Score=186, Evalue=3e-47, Organism=Drosophila melanogaster, GI17136970, Length=183, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 79201; Mature: 79069
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHMGAYTETMSEKNSHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVC CCCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LENGGQSRISVQDDGRGIPAEDLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASV EECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SRFTITSASQDAAGQAAAHRVEVEHGLLKSSGPAALHKGTLVEVRDLFSNIPARLKFLKT HEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCHHEEEECC PSTEFRRAQDWLARLALTRPQVGFCLYSGEREALRFLPGQTLAERLAVLWPRLIVDALRP CCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC FDGRRHGIRAHGLAALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQ CCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC IALFVEMDPAEVDVNVHPAKSEVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATP EEEEEEECCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AADGRAYGQAGSPASDSPASDSSGTFGSPDKSYAPGADPGDPGDPAGAAPRPQGFWGRLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPPLVERQERDSAADQGEWHVSAPAASVEGEAGHATYGTLPGFTGRAGLSAPSGLPGPDG CCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASDASVFGAQFSSSSAPAGSAGLAAAAQEGFFLEQEDAACGRMAEDSGTYAAGAGDAADD CCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHCCCCCCCCCEECCCCCCCCC RGDVAAGHGGSRQPLRVENMEYLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRG CCCEECCCCCCCCCEEEHHHHHHHHHHCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHC GFAGSGQLLALPLELSLHPAERERLFELRENLESLGFVFESSGAGLEVRGMPPVLSRAEA CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCCCEEECCCCHHHHHHHH RDFLREALAGRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRP HHHHHHHHCCCCCCHHHEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC CVLRWDGPELEKMFKRRQS EEEEECCHHHHHHHHHHCC >Mature Secondary Structure PHMGAYTETMSEKNSHIRLLPPELRNQIAAGEVVERPASVLKELVENSLDAQAGQIDVC CCCCCHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE LENGGQSRISVQDDGRGIPAEDLEMAVTRHATSKIRCLEDLERILSYGFRGEALPSIASV EECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH SRFTITSASQDAAGQAAAHRVEVEHGLLKSSGPAALHKGTLVEVRDLFSNIPARLKFLKT HEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCHHEEEECC PSTEFRRAQDWLARLALTRPQVGFCLYSGEREALRFLPGQTLAERLAVLWPRLIVDALRP CCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC FDGRRHGIRAHGLAALPNVSQPRGDRILLYVNGRSVTDKRLLAAVRQAYKGRMTSRDYPQ CCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC IALFVEMDPAEVDVNVHPAKSEVRFRDESAVFSAVLHAVQGALVTSFDVAEAAWHEGATP EEEEEEECCCEEEEEECCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC AADGRAYGQAGSPASDSPASDSSGTFGSPDKSYAPGADPGDPGDPAGAAPRPQGFWGRLD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NPPLVERQERDSAADQGEWHVSAPAASVEGEAGHATYGTLPGFTGRAGLSAPSGLPGPDG CCCCCCCHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ASDASVFGAQFSSSSAPAGSAGLAAAAQEGFFLEQEDAACGRMAEDSGTYAAGAGDAADD CCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCEEECCCCHHCCCCCCCCCEECCCCCCCCC RGDVAAGHGGSRQPLRVENMEYLGQVANTYLVLRDRDGALILLDQHAAHERVLYTRMRRG CCCEECCCCCCCCCEEEHHHHHHHHHHCEEEEEECCCCEEEEEECCCHHHHHHHHHHHHC GFAGSGQLLALPLELSLHPAERERLFELRENLESLGFVFESSGAGLEVRGMPPVLSRAEA CCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHCEEEECCCCCEEECCCCHHHHHHHH RDFLREALAGRKDDLAGMFISMSCKAAIKAGQRLTDDEAAGLLRQWLAAPDREYCPHGRP HHHHHHHHCCCCCCHHHEEEEHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC CVLRWDGPELEKMFKRRQS EEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA