| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905579
Identifier: 220905579
GI number: 220905579
Start: 2787615
End: 2788091
Strand: Reverse
Name: 220905579
Synonym: Ddes_2318
Alternate gene names: NA
Gene position: 2788091-2787615 (Counterclockwise)
Preceding gene: 220905580
Following gene: 220905573
Centisome position: 97.03
GC content: 58.49
Gene sequence:
>477_bases ATGGAAACGAAGTATTGGCTCCTGAAGTCGGAGCCGGGCTGTTATTCGATTGACGACCTCGCGGCGGAGCCTGATCAGGT CACCAGTTGGGGCGGTGTGCGCAACTTTCAGGCGCGCAATTTTCTGCGCGATCAGATGGCTGTGGGCGACATGGCCATTT TTTATCACAGCGTCACCGCGCCTTCGGCGGTTGGTGTGGCCCGCGTAGTGAGGACCGGGTACCCTGACCCCACAGCCTGG GAGCCGGAAGACGAACACTTTGACCCCAGGTCGACCCCGGAAAAGCCGCTCTGGTTTGCAGTAGACATCCGTTTTGTCAA AAAATTCGCCAACCCCGTGCCGCTCAAGGCCATGCGTATGGTTCCCGCGCTGTTCGGCATGGAGCTTTTGCGTAAGGGGT CCAGGCTCTCGGTTATGCCCGTGAGCAAGGAAGAGTTTGCTGTCATCTGCAAGATGGGTGACGCGGAAGACAGCTAG
Upstream 100 bases:
>100_bases CATACTGCACTGACGCCGTGGGTGCACGGGCCAGTACCGGCAGGAAATACCTGCTGCTGTGCTGGATCCGCTGCCCGAAG CCTGTAGTCTGGAGATTTTT
Downstream 100 bases:
>100_bases AACAATTTAACTTTTAAATTGTTCTGACGGCTGCGTGAGCAGACGTTCGCTACGGAGGCGTAAGCGCAGTTTATCTGCGC GGTTAAACGCCGAAGTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues METKYWLLKSEPGCYSIDDLAAEPDQVTSWGGVRNFQARNFLRDQMAVGDMAIFYHSVTAPSAVGVARVVRTGYPDPTAW EPEDEHFDPRSTPEKPLWFAVDIRFVKKFANPVPLKAMRMVPALFGMELLRKGSRLSVMPVSKEEFAVICKMGDAEDS
Sequences:
>Translated_158_residues METKYWLLKSEPGCYSIDDLAAEPDQVTSWGGVRNFQARNFLRDQMAVGDMAIFYHSVTAPSAVGVARVVRTGYPDPTAW EPEDEHFDPRSTPEKPLWFAVDIRFVKKFANPVPLKAMRMVPALFGMELLRKGSRLSVMPVSKEEFAVICKMGDAEDS >Mature_158_residues METKYWLLKSEPGCYSIDDLAAEPDQVTSWGGVRNFQARNFLRDQMAVGDMAIFYHSVTAPSAVGVARVVRTGYPDPTAW EPEDEHFDPRSTPEKPLWFAVDIRFVKKFANPVPLKAMRMVPALFGMELLRKGSRLSVMPVSKEEFAVICKMGDAEDS
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=174, Percent_Identity=37.3563218390805, Blast_Score=120, Evalue=4e-28, Organism=Homo sapiens, GI40806221, Length=174, Percent_Identity=37.3563218390805, Blast_Score=120, Evalue=4e-28, Organism=Homo sapiens, GI7661804, Length=174, Percent_Identity=37.3563218390805, Blast_Score=120, Evalue=4e-28, Organism=Homo sapiens, GI83267859, Length=106, Percent_Identity=44.3396226415094, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI40806219, Length=106, Percent_Identity=44.3396226415094, Blast_Score=99, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17790; Mature: 17790
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METKYWLLKSEPGCYSIDDLAAEPDQVTSWGGVRNFQARNFLRDQMAVGDMAIFYHSVTA CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCC PSAVGVARVVRTGYPDPTAWEPEDEHFDPRSTPEKPLWFAVDIRFVKKFANPVPLKAMRM CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHH VPALFGMELLRKGSRLSVMPVSKEEFAVICKMGDAEDS HHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCC >Mature Secondary Structure METKYWLLKSEPGCYSIDDLAAEPDQVTSWGGVRNFQARNFLRDQMAVGDMAIFYHSVTA CCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCC PSAVGVARVVRTGYPDPTAWEPEDEHFDPRSTPEKPLWFAVDIRFVKKFANPVPLKAMRM CHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHCCCCCHHHHHH VPALFGMELLRKGSRLSVMPVSKEEFAVICKMGDAEDS HHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA