| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ywrD [H]
Identifier: 220905289
GI number: 220905289
Start: 2439700
End: 2441358
Strand: Direct
Name: ywrD [H]
Synonym: Ddes_2027
Alternate gene names: 220905289
Gene position: 2439700-2441358 (Clockwise)
Preceding gene: 220905288
Following gene: 220905295
Centisome position: 84.91
GC content: 65.52
Gene sequence:
>1659_bases ATGCAAGCCAGCCACAGGTATTCCCTTACCCTTTCCACTGCCAGCAACCCGCTGAGCCTGCGGGGCATGGTCACAAGCCC CCACTACCTGGCCTCCCAGGCGGGGCGCGACATCCTGCGCGCGGGCGGCACCGCCGTGGATGCGGCCATTGCCGCAGCCG CAGTGCTTTCTGTGGTCTATCCCCACATGTGCGGCATTGGCGGCGATAACTTCTGGCTCATATATGATGCGGCTTCGCAA CAGATGCGCGCGCTCAACGGCAGCGGCCGCGCCGCGCGGGCAGCCAGCGCAGGCCTGTACGCCGAACGCGGGCACAAGGC CGTACCCACGCGCGGGGCGCTGGCAGCCGTTACTGTTCCCGGCGCGGTGTCGGGCTGGGCCGCCGCCTTTGATCACAGCA AAAAACATATGGCTTCGCCCCTGGCCTGGGGTGATCTGCTGGAATCCGCCCGCGAGCATGCCGAAAGCGGCTTTGCCGTG TCACACTCCCTGGCGGGCAGCCTGACGCTTGTAAGCAGCGGCAAACCCAACTACAGCCTGAACGACTGCCCCGAGTTTCG CGAGCTTTTCTTTACACCTGAGGGGCATGCCCCGACATTCGCCTCCGTTCTGCGACAGCCGCACCTTGCCCGCACCCTCG GCCGCCTGGCTGCCGAAGGACCTGAGGATTTTTACTGCGGCGTGACAGCCCGGGCCATTGTGGCCGCCATGCAACGCCAC GGCGGGCTGCTCTCACAGGAAGACCTGAGCAGCCACACGGCCGACTGGGCCGAGCCGCTGCGCGTGGACTACCGGGGCTA CACGGCCTGCACACCACCACCCAACTGCCAGGGACTGGCAACACTTGAGATACTTAACATCCTCAACCAGATGGATGTCG AGGCCCTGGGCGAAGGCACGGCCGACTACTATCATGTCATGGCCGAGGCCACGCGCGAAGCCTTTATTGACCGCCAGCAC TACCTCACGGATCCGGACTTTGCCGACATCCCCACTGCCAGGCTGCTTTCACCGGCGCATGCACGGCAACAGGCGGCACG TATCCGCATGGACAAAAGCGCCGGTCCCCTGCCCCCATTGCCTCCTGGCGGCGACACCATCTGGCTTGGCGTGGTGGACG CGGCCGGCAATGCCGTGTCGCTCATCCAGAGCATTTACCACGAGTTCGGCTCGGGCATTGTGGCGCACGACGCTGGTTTT GTGCTGCAAAACCGGGGCTGCGCCTTTGCCCTTGAGCCGGGGCATGTCAACAGCCTTCAGCCGGGCAAGCGAACCCTGCA CACCCTCACGCCGGCCATGCTTCTCAAGGACGGCAGACCCCACCTTGTTTACGGCAGCATGGGCGGCGACGGGCAACCCC AGACCATTGCGGCCATGACCACCCGTATGGTGGATTTCGGCATGGAGCCGCAGGACGCCGTGAACGCGCCGCGCTGGCTG CTGGGCCGGAGCTGGGGAGCGGAATCCAACGACCTGAAGCTTGAGGGACGCATCCCAGAAGATGTGGCGCGGGACCTGGA ACGACGGGGACATGCAGTGCGGCGCATCGCGGACTTTACAGAAATGATGGGGCATGCCGGGGCCATTATGCGGCGGCCGG GCGATGTTTGGCAGGGCGCCACAGACCCGCGCGGCGACGGCCAGGCAGCAGCGCTGTAG
Upstream 100 bases:
>100_bases CCTTTGCCCCCTGCCCCTTCCTGTGGCATACTGCCCGCGAACATCCGCCAGCCGCGCCAGCGCGCCGAAAACGGGCGGGA CAAGCCAGTACGAGGTTCGC
Downstream 100 bases:
>100_bases CAGGCCTGCCGGGCGCTGCGTCAAATGCGGACCTGGGCGACAAGCGTGTACAGCGGCACGAAACCTGCCCGGCTCTCCAT GCCCGTGCAACATGGGGGGG
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 552; Mature: 552
Protein sequence:
>552_residues MQASHRYSLTLSTASNPLSLRGMVTSPHYLASQAGRDILRAGGTAVDAAIAAAAVLSVVYPHMCGIGGDNFWLIYDAASQ QMRALNGSGRAARAASAGLYAERGHKAVPTRGALAAVTVPGAVSGWAAAFDHSKKHMASPLAWGDLLESAREHAESGFAV SHSLAGSLTLVSSGKPNYSLNDCPEFRELFFTPEGHAPTFASVLRQPHLARTLGRLAAEGPEDFYCGVTARAIVAAMQRH GGLLSQEDLSSHTADWAEPLRVDYRGYTACTPPPNCQGLATLEILNILNQMDVEALGEGTADYYHVMAEATREAFIDRQH YLTDPDFADIPTARLLSPAHARQQAARIRMDKSAGPLPPLPPGGDTIWLGVVDAAGNAVSLIQSIYHEFGSGIVAHDAGF VLQNRGCAFALEPGHVNSLQPGKRTLHTLTPAMLLKDGRPHLVYGSMGGDGQPQTIAAMTTRMVDFGMEPQDAVNAPRWL LGRSWGAESNDLKLEGRIPEDVARDLERRGHAVRRIADFTEMMGHAGAIMRRPGDVWQGATDPRGDGQAAAL
Sequences:
>Translated_552_residues MQASHRYSLTLSTASNPLSLRGMVTSPHYLASQAGRDILRAGGTAVDAAIAAAAVLSVVYPHMCGIGGDNFWLIYDAASQ QMRALNGSGRAARAASAGLYAERGHKAVPTRGALAAVTVPGAVSGWAAAFDHSKKHMASPLAWGDLLESAREHAESGFAV SHSLAGSLTLVSSGKPNYSLNDCPEFRELFFTPEGHAPTFASVLRQPHLARTLGRLAAEGPEDFYCGVTARAIVAAMQRH GGLLSQEDLSSHTADWAEPLRVDYRGYTACTPPPNCQGLATLEILNILNQMDVEALGEGTADYYHVMAEATREAFIDRQH YLTDPDFADIPTARLLSPAHARQQAARIRMDKSAGPLPPLPPGGDTIWLGVVDAAGNAVSLIQSIYHEFGSGIVAHDAGF VLQNRGCAFALEPGHVNSLQPGKRTLHTLTPAMLLKDGRPHLVYGSMGGDGQPQTIAAMTTRMVDFGMEPQDAVNAPRWL LGRSWGAESNDLKLEGRIPEDVARDLERRGHAVRRIADFTEMMGHAGAIMRRPGDVWQGATDPRGDGQAAAL >Mature_552_residues MQASHRYSLTLSTASNPLSLRGMVTSPHYLASQAGRDILRAGGTAVDAAIAAAAVLSVVYPHMCGIGGDNFWLIYDAASQ QMRALNGSGRAARAASAGLYAERGHKAVPTRGALAAVTVPGAVSGWAAAFDHSKKHMASPLAWGDLLESAREHAESGFAV SHSLAGSLTLVSSGKPNYSLNDCPEFRELFFTPEGHAPTFASVLRQPHLARTLGRLAAEGPEDFYCGVTARAIVAAMQRH GGLLSQEDLSSHTADWAEPLRVDYRGYTACTPPPNCQGLATLEILNILNQMDVEALGEGTADYYHVMAEATREAFIDRQH YLTDPDFADIPTARLLSPAHARQQAARIRMDKSAGPLPPLPPGGDTIWLGVVDAAGNAVSLIQSIYHEFGSGIVAHDAGF VLQNRGCAFALEPGHVNSLQPGKRTLHTLTPAMLLKDGRPHLVYGSMGGDGQPQTIAAMTTRMVDFGMEPQDAVNAPRWL LGRSWGAESNDLKLEGRIPEDVARDLERRGHAVRRIADFTEMMGHAGAIMRRPGDVWQGATDPRGDGQAAAL
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=569, Percent_Identity=29.701230228471, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI73915090, Length=569, Percent_Identity=29.701230228471, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI73915096, Length=569, Percent_Identity=29.701230228471, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI73915094, Length=569, Percent_Identity=29.701230228471, Blast_Score=161, Evalue=1e-39, Organism=Homo sapiens, GI113429326, Length=549, Percent_Identity=29.3260473588342, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI113429324, Length=549, Percent_Identity=29.5081967213115, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI109148539, Length=554, Percent_Identity=27.6173285198556, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI153266885, Length=562, Percent_Identity=24.9110320284698, Blast_Score=102, Evalue=1e-21, Organism=Homo sapiens, GI153266901, Length=563, Percent_Identity=24.866785079929, Blast_Score=102, Evalue=1e-21, Organism=Escherichia coli, GI1789856, Length=556, Percent_Identity=33.9928057553957, Blast_Score=270, Evalue=1e-73, Organism=Caenorhabditis elegans, GI193208245, Length=497, Percent_Identity=26.9617706237425, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI193208247, Length=497, Percent_Identity=26.9617706237425, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17542894, Length=536, Percent_Identity=25.7462686567164, Blast_Score=139, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17506189, Length=532, Percent_Identity=24.6240601503759, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI212646519, Length=488, Percent_Identity=26.0245901639344, Blast_Score=120, Evalue=1e-27, Organism=Caenorhabditis elegans, GI72000294, Length=488, Percent_Identity=26.0245901639344, Blast_Score=120, Evalue=2e-27, Organism=Saccharomyces cerevisiae, GI6323330, Length=477, Percent_Identity=21.8029350104822, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI161077878, Length=523, Percent_Identity=27.5334608030593, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI24642670, Length=523, Percent_Identity=27.5334608030593, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI24642666, Length=523, Percent_Identity=27.5334608030593, Blast_Score=146, Evalue=4e-35, Organism=Drosophila melanogaster, GI45551474, Length=523, Percent_Identity=27.5334608030593, Blast_Score=146, Evalue=5e-35, Organism=Drosophila melanogaster, GI161077880, Length=523, Percent_Identity=27.5334608030593, Blast_Score=146, Evalue=5e-35, Organism=Drosophila melanogaster, GI161077496, Length=532, Percent_Identity=24.4360902255639, Blast_Score=119, Evalue=6e-27, Organism=Drosophila melanogaster, GI18859893, Length=492, Percent_Identity=25.4065040650407, Blast_Score=112, Evalue=5e-25, Organism=Drosophila melanogaster, GI18859741, Length=484, Percent_Identity=23.9669421487603, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 58867; Mature: 58867
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQASHRYSLTLSTASNPLSLRGMVTSPHYLASQAGRDILRAGGTAVDAAIAAAAVLSVVY CCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH PHMCGIGGDNFWLIYDAASQQMRALNGSGRAARAASAGLYAERGHKAVPTRGALAAVTVP HHHHCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCCCCCCEEEEECC GAVSGWAAAFDHSKKHMASPLAWGDLLESAREHAESGFAVSHSLAGSLTLVSSGKPNYSL CCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCEEEHHCCCCEEEEECCCCCCCC NDCPEFRELFFTPEGHAPTFASVLRQPHLARTLGRLAAEGPEDFYCGVTARAIVAAMQRH CCCHHHHHHEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH GGLLSQEDLSSHTADWAEPLRVDYRGYTACTPPPNCQGLATLEILNILNQMDVEALGEGT CCCCCHHHHHHCCHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHCCCC ADYYHVMAEATREAFIDRQHYLTDPDFADIPTARLLSPAHARQQAARIRMDKSAGPLPPL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCC PPGGDTIWLGVVDAAGNAVSLIQSIYHEFGSGIVAHDAGFVLQNRGCAFALEPGHVNSLQ CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCCCCCC PGKRTLHTLTPAMLLKDGRPHLVYGSMGGDGQPQTIAAMTTRMVDFGMEPQDAVNAPRWL CCHHHHHHHCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHH LGRSWGAESNDLKLEGRIPEDVARDLERRGHAVRRIADFTEMMGHAGAIMRRPGDVWQGA HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCC TDPRGDGQAAAL CCCCCCCCCCCC >Mature Secondary Structure MQASHRYSLTLSTASNPLSLRGMVTSPHYLASQAGRDILRAGGTAVDAAIAAAAVLSVVY CCCCCEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH PHMCGIGGDNFWLIYDAASQQMRALNGSGRAARAASAGLYAERGHKAVPTRGALAAVTVP HHHHCCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHCCCHHHCCCCCCCCCCCEEEEECC GAVSGWAAAFDHSKKHMASPLAWGDLLESAREHAESGFAVSHSLAGSLTLVSSGKPNYSL CCHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCEEEHHCCCCEEEEECCCCCCCC NDCPEFRELFFTPEGHAPTFASVLRQPHLARTLGRLAAEGPEDFYCGVTARAIVAAMQRH CCCHHHHHHEECCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHH GGLLSQEDLSSHTADWAEPLRVDYRGYTACTPPPNCQGLATLEILNILNQMDVEALGEGT CCCCCHHHHHHCCHHHHHHHEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCHHHHCCCC ADYYHVMAEATREAFIDRQHYLTDPDFADIPTARLLSPAHARQQAARIRMDKSAGPLPPL HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCC PPGGDTIWLGVVDAAGNAVSLIQSIYHEFGSGIVAHDAGFVLQNRGCAFALEPGHVNSLQ CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCEEEECCCCEEEECCCCCCCCC PGKRTLHTLTPAMLLKDGRPHLVYGSMGGDGQPQTIAAMTTRMVDFGMEPQDAVNAPRWL CCHHHHHHHCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHH LGRSWGAESNDLKLEGRIPEDVARDLERRGHAVRRIADFTEMMGHAGAIMRRPGDVWQGA HCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHCCC TDPRGDGQAAAL CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]