Click here to switch to the map view.

The map label for this gene is ybiI [C]

Identifier: 220905221

GI number: 220905221

Start: 2362795

End: 2363013

Strand: Direct

Name: ybiI [C]

Synonym: Ddes_1959

Alternate gene names: 220905221

Gene position: 2362795-2363013 (Clockwise)

Preceding gene: 220905220

Following gene: 220905235

Centisome position: 82.23

GC content: 65.3

Gene sequence:

>219_bases
ATGGACGTTTTTGACCAAGCTACGGAACTGGAGCGTCTGGACCGTGAATCGGCCCTCATGCGCGCCCGCGCCGCCATTGA
CCGGGGAGGACCGGAAATCATCGACGGCGTGGCCTGCTGCCGCGACTGCGGCGACCCCATCCCCCAGAAACGCCTTGAGG
CCCTGCCGGGCGTAGGCTTGTGCCGCACCTGCCAGGAAGAACGCGAAAGCGGCAACTAA

Upstream 100 bases:

>100_bases
ATCATTGTAGACTAAATAGTCTGCGTTGAAAATCAGGTACGACTATTACGGCAACCCCGCTTCGGCGGGGTTGCCGCTTA
CTTTGACAAGGAGAAAGCAT

Downstream 100 bases:

>100_bases
GCCGCTCCCTCCCCCACATACAGGCGGGGCGCAAGCCTGCGCCGCTGTTTTTCCGGCTACCGCCGGGTCTTGACGCTTGC
CCGTTGCCCCAGAACAGCCA

Product: TraR/DksA family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TraR/DksA Family; C4-Type Zinc Finger DksA/TraR Family Protein; Conserved Domain Protein

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MDVFDQATELERLDRESALMRARAAIDRGGPEIIDGVACCRDCGDPIPQKRLEALPGVGLCRTCQEERESGN

Sequences:

>Translated_72_residues
MDVFDQATELERLDRESALMRARAAIDRGGPEIIDGVACCRDCGDPIPQKRLEALPGVGLCRTCQEERESGN
>Mature_72_residues
MDVFDQATELERLDRESALMRARAAIDRGGPEIIDGVACCRDCGDPIPQKRLEALPGVGLCRTCQEERESGN

Specific function: Unknown

COG id: COG1734

COG function: function code T; DnaK suppressor protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7905; Mature: 7905

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS51128 ZF_DKSA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVFDQATELERLDRESALMRARAAIDRGGPEIIDGVACCRDCGDPIPQKRLEALPGVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
CRTCQEERESGN
HHHHHHHHHCCC
>Mature Secondary Structure
MDVFDQATELERLDRESALMRARAAIDRGGPEIIDGVACCRDCGDPIPQKRLEALPGVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCH
CRTCQEERESGN
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA