| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is aroK [H]
Identifier: 220905235
GI number: 220905235
Start: 2376567
End: 2377145
Strand: Direct
Name: aroK [H]
Synonym: Ddes_1973
Alternate gene names: 220905235
Gene position: 2376567-2377145 (Clockwise)
Preceding gene: 220905221
Following gene: 220905236
Centisome position: 82.71
GC content: 60.1
Gene sequence:
>579_bases ATGCCCGCGCCCTCCCCTGCCGACGCCCCGCCTGCCATGTCTGGCCCAACCAGGCCATCTCCCTGCATAATCCTCATCGG CATGGCCGGAGCGGGCAAATCCACCGTGGGCGAAGCACTGGCCCGCACGCTTGGCTGGGCCTTTATGGACAGCGATCATC TTATTGAAGCCGTGTATGCCGCCCGCCTGCAAGATGTTACCGATGCGCTCGGCAAGTCTGCGTTTCTGGATGTGGAGTCC AGCGTTGTCAGCGCCATAAAGGCCAATCGCACGGTTATTGCCACAGGCGGCAGTGTTGTTTACCGCGAGCAGACCATGCG ACACCTGGCCTCACTGGGACCGCTGGTTTACCTGGATGTGCCTTTTACCGTGGTGGAAGAACGTATTGCCCGGAATCCGC AACGCGGCCTTGCCATTGCCCCCGGCCAGACCCTGCGCGACATTTTTCAGGAGCGGGAAGAGCTTTACACCCGCTACGCC ACATTGCGCTGTCCCGCTGCAGACAAAAATCCACAACAGTGTGTGAACTGGATAGTGCAGCAACTGCCCGCTGAAGTGAC CATGCCTGACAGGCCGTAA
Upstream 100 bases:
>100_bases GCCCTGCCGCAAGAGATCTTTACGCTTTTGCCTCTGCCTGCCTTGACAGGTCGCCGCCGCTTAGGCACATTTTCAAAAAA ATTCCCCATCAGGAGTCGAA
Downstream 100 bases:
>100_bases CAGCCGTATGCCACGGGACCATACCGTTGCCGTGGCTTTTTTCAACAGCGGCCCTGCCTTTCCCTTCCGGCCGAAGCCCT ACGCAGCAGGCGGCACGCTG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPAPSPADAPPAMSGPTRPSPCIILIGMAGAGKSTVGEALARTLGWAFMDSDHLIEAVYAARLQDVTDALGKSAFLDVES SVVSAIKANRTVIATGGSVVYREQTMRHLASLGPLVYLDVPFTVVEERIARNPQRGLAIAPGQTLRDIFQEREELYTRYA TLRCPAADKNPQQCVNWIVQQLPAEVTMPDRP
Sequences:
>Translated_192_residues MPAPSPADAPPAMSGPTRPSPCIILIGMAGAGKSTVGEALARTLGWAFMDSDHLIEAVYAARLQDVTDALGKSAFLDVES SVVSAIKANRTVIATGGSVVYREQTMRHLASLGPLVYLDVPFTVVEERIARNPQRGLAIAPGQTLRDIFQEREELYTRYA TLRCPAADKNPQQCVNWIVQQLPAEVTMPDRP >Mature_191_residues PAPSPADAPPAMSGPTRPSPCIILIGMAGAGKSTVGEALARTLGWAFMDSDHLIEAVYAARLQDVTDALGKSAFLDVESS VVSAIKANRTVIATGGSVVYREQTMRHLASLGPLVYLDVPFTVVEERIARNPQRGLAIAPGQTLRDIFQEREELYTRYAT LRCPAADKNPQQCVNWIVQQLPAEVTMPDRP
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Homo sapiens, GI153792148, Length=143, Percent_Identity=30.0699300699301, Blast_Score=68, Evalue=5e-12, Organism=Escherichia coli, GI87082255, Length=169, Percent_Identity=32.5443786982249, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786587, Length=161, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=5e-14,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20729; Mature: 20598
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAPSPADAPPAMSGPTRPSPCIILIGMAGAGKSTVGEALARTLGWAFMDSDHLIEAVYA CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH ARLQDVTDALGKSAFLDVESSVVSAIKANRTVIATGGSVVYREQTMRHLASLGPLVYLDV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHCCEEEEEC PFTVVEERIARNPQRGLAIAPGQTLRDIFQEREELYTRYATLRCPAADKNPQQCVNWIVQ CHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QLPAEVTMPDRP HCCCCCCCCCCC >Mature Secondary Structure PAPSPADAPPAMSGPTRPSPCIILIGMAGAGKSTVGEALARTLGWAFMDSDHLIEAVYA CCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH ARLQDVTDALGKSAFLDVESSVVSAIKANRTVIATGGSVVYREQTMRHLASLGPLVYLDV HHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHHHHHHHHHCCEEEEEC PFTVVEERIARNPQRGLAIAPGQTLRDIFQEREELYTRYATLRCPAADKNPQQCVNWIVQ CHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH QLPAEVTMPDRP HCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA