Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is ydjM [C]

Identifier: 220905095

GI number: 220905095

Start: 2209296

End: 2209802

Strand: Reverse

Name: ydjM [C]

Synonym: Ddes_1832

Alternate gene names: 220905095

Gene position: 2209802-2209296 (Counterclockwise)

Preceding gene: 220905096

Following gene: 220905094

Centisome position: 76.9

GC content: 61.93

Gene sequence:

>507_bases
ATGAAGTGGATAACCCATCAGGCCACGGCCGTGGCCGCTGCCCTGGCATTGCACCTGCCTGCCGCCGGAGTGGCGGCAGC
CTGTGCCGGAGCCGTATTGCCCGATGTGCTGGATCAGCGCATGGCGGGGCTGGCCCCCACCAGACGGGGAAGACAGAGAA
TATTCAATGCCGTGCACCGGGGCATTACACACTGGTTTGGCTGGTGGCTGGGCCTGTGCGTGGCTGCCTTTGTTTTGCCG
GCGGCCGAGCTTGGCCCCATAGGGCGTGATGTGTTGCTGGGCCTGGGATTTGGCGGCTTAAGCCATGTGGCTCTGGACAT
GCTGACGCCTTCCGGGGTTCCGCTGACGCCGTTTTCACGCCGCAACAGGGTTTCGCTCAGGCTCTGTTCCACCGGCAGCC
TTGGTGAATACTGTTTTCTGGCCTGTGTGGTCGGGCTGACGTGGTGGTTTTACGGCGAAGACCTGCTGCACATGACACGG
CACCTCGCCCGTATGAAAATTTTGTAG

Upstream 100 bases:

>100_bases
GCTGAAGCCGGCAGCGCTGTGCCTTGGCGGCGTTGCGCGCCGTAGGAGCGTCTTGAACCTTTGGAATGCATGTTTAGGTC
AAAGGTTCTGAAGGAATTGC

Downstream 100 bases:

>100_bases
ACTGCACTGACAGTGTTGCCCGCCGGACATCCGGGCGCGGCGAACGCGCGGCCCTGCCGTGACCGTTCGCCGCGTTTTTT
ATTGTACGCACCCTGAGCAC

Product: membrane-bound metal-dependent hydrolase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MKWITHQATAVAAALALHLPAAGVAAACAGAVLPDVLDQRMAGLAPTRRGRQRIFNAVHRGITHWFGWWLGLCVAAFVLP
AAELGPIGRDVLLGLGFGGLSHVALDMLTPSGVPLTPFSRRNRVSLRLCSTGSLGEYCFLACVVGLTWWFYGEDLLHMTR
HLARMKIL

Sequences:

>Translated_168_residues
MKWITHQATAVAAALALHLPAAGVAAACAGAVLPDVLDQRMAGLAPTRRGRQRIFNAVHRGITHWFGWWLGLCVAAFVLP
AAELGPIGRDVLLGLGFGGLSHVALDMLTPSGVPLTPFSRRNRVSLRLCSTGSLGEYCFLACVVGLTWWFYGEDLLHMTR
HLARMKIL
>Mature_168_residues
MKWITHQATAVAAALALHLPAAGVAAACAGAVLPDVLDQRMAGLAPTRRGRQRIFNAVHRGITHWFGWWLGLCVAAFVLP
AAELGPIGRDVLLGLGFGGLSHVALDMLTPSGVPLTPFSRRNRVSLRLCSTGSLGEYCFLACVVGLTWWFYGEDLLHMTR
HLARMKIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18154; Mature: 18154

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWITHQATAVAAALALHLPAAGVAAACAGAVLPDVLDQRMAGLAPTRRGRQRIFNAVHR
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GITHWFGWWLGLCVAAFVLPAAELGPIGRDVLLGLGFGGLSHVALDMLTPSGVPLTPFSR
HHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
RNRVSLRLCSTGSLGEYCFLACVVGLTWWFYGEDLLHMTRHLARMKIL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKWITHQATAVAAALALHLPAAGVAAACAGAVLPDVLDQRMAGLAPTRRGRQRIFNAVHR
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
GITHWFGWWLGLCVAAFVLPAAELGPIGRDVLLGLGFGGLSHVALDMLTPSGVPLTPFSR
HHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC
RNRVSLRLCSTGSLGEYCFLACVVGLTWWFYGEDLLHMTRHLARMKIL
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA