| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220905073
Identifier: 220905073
GI number: 220905073
Start: 2184790
End: 2185449
Strand: Direct
Name: 220905073
Synonym: Ddes_1810
Alternate gene names: NA
Gene position: 2184790-2185449 (Clockwise)
Preceding gene: 220905072
Following gene: 220905074
Centisome position: 76.03
GC content: 58.94
Gene sequence:
>660_bases ATGCATAACCGCCTGAATATACTGCTTCTCGTCATACTGAGTCTTGCCGTGGTCCTGGGCGCGTGCAGCAAGCGCCCGCG CAGTACCGCCGATGTGCCGCGCAACCTTTCCTCTGCCTACACCATTACCGTGGTTCCCTTCACCCAGCCCGTCAATGCCA GTCAGCTTATCATGGGGCGCATTCCCGAAAACCAGGGGCGCATTCCCGATGATATGCTCACTGCCCTGGACATGCGCCTG CGCCATGTGCTGACCACACAGACCAGCAGGCAATACAAGTTCATCAGCCAGCGCACCCTGCCCAAAAATGCGACCGCATT TCACAGCTCCGAACAGCCGCAGGCCCTGCCCCTTTGGGTAGCCTACGGCAAGAAGCAGGGAGCGCAGCTGCTGCTGATCC CTCAGGTGCTGGACTGGCATGAGCGCGAAGGCTCCAAAGCGGGCGTTACCCAGTCGGCCCATGTGCGGGTAGAATTTTTC CTGCTGCGCGTGGATGCAGGCAGCATCATGGACCGCTCTGTCTTTGAGGAACAGCAGGTCGGGCTGACAGAAAATCTGCT CAACGTGGGTTCATTCCTCAAGCGCAAGGGGCAGTGGGTCACTGCCGAGGAACTGACCGTGGACGGCATAAGCAAGGCAG TAAAGGACTTGGGTCTATGA
Upstream 100 bases:
>100_bases ATTTGCTGGAATCCGCCGCCAAGGGCCTGGGCCTTGCCCTGGCTCATGCAGTGCGTCGGCACGGCACAACCATACGCAGC ACCAAGGGAGGTCTTGATTA
Downstream 100 bases:
>100_bases TTATTTTTCCCGCTGTTGACATTCAGAACGGCAAGGCCGTGCGGCTTAAGCAGGGCCGCGCTCACGAAAGCACGGTTTTT GCCGAAAGCCCCGTAGATGC
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGRIPENQGRIPDDMLTALDMRL RHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWVAYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFF LLRVDAGSIMDRSVFEEQQVGLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL
Sequences:
>Translated_219_residues MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGRIPENQGRIPDDMLTALDMRL RHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWVAYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFF LLRVDAGSIMDRSVFEEQQVGLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL >Mature_219_residues MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGRIPENQGRIPDDMLTALDMRL RHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWVAYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFF LLRVDAGSIMDRSVFEEQQVGLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24383; Mature: 24383
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEEC IPENQGRIPDDMLTALDMRLRHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE AYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFFLLRVDAGSIMDRSVFEEQQV EECCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHC GLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL CHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MHNRLNILLLVILSLAVVLGACSKRPRSTADVPRNLSSAYTITVVPFTQPVNASQLIMGR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEEC IPENQGRIPDDMLTALDMRLRHVLTTQTSRQYKFISQRTLPKNATAFHSSEQPQALPLWV CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEE AYGKKQGAQLLLIPQVLDWHEREGSKAGVTQSAHVRVEFFLLRVDAGSIMDRSVFEEQQV EECCCCCCEEEEEHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHC GLTENLLNVGSFLKRKGQWVTAEELTVDGISKAVKDLGL CHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA