| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is hisB [H]
Identifier: 220905072
GI number: 220905072
Start: 2184194
End: 2184790
Strand: Direct
Name: hisB [H]
Synonym: Ddes_1809
Alternate gene names: 220905072
Gene position: 2184194-2184790 (Clockwise)
Preceding gene: 220905071
Following gene: 220905073
Centisome position: 76.01
GC content: 62.65
Gene sequence:
>597_bases ATGACCACCGCCCCGCGCACTTCTACGCAGGCGCGCACCAGCGCCGAAACCGACATCCGCCTTGAACTGAATCTGGACGG TCAGGGCAAGACAGACATCCGAACCGGATTCGGCCTGCTGGACCATATGCTCACCCTCACGTTCTTCTGGGCAGGCATGG ACCTGACCCTTGTCTGCGAGGGTGACATGCAGGTGGACGCTCACCACACGGCCGAGGACGTGGGCATGACCCTTGGCAAG GCCCTGCTCGAAGCCCTGGGGGACAGGGCGGGCATTGCCCGCGTGGGTTACGGCCGTGTGCCTATGGACGAGGCCCTTGC GGAAGTTACCGTTGACCTTTCAGGCCGCCCCTGGCTTGAGTGGCGTGGCGACGAACTGTTGCCCCCCGTACTCGCCGGGG AGGAAAAAGACCTCTGGCGTGAATACTATAAAGCCCTTGCCAGCGGCGCGCGCTGCAATCTGCATGTGGACATGCGCTAC GGCAAAAACGGGCATCATTTGCTGGAATCCGCCGCCAAGGGCCTGGGCCTTGCCCTGGCTCATGCAGTGCGTCGGCACGG CACAACCATACGCAGCACCAAGGGAGGTCTTGATTAA
Upstream 100 bases:
>100_bases GCAAACCCAAAACTGAAAAAGATGCCGATGACGGCGGGCAGGAAAAGACAGACGCAGACGCTGCATCGGATGCAAAAACC GCCAACGCCTCGGAGAAAGC
Downstream 100 bases:
>100_bases TGCATAACCGCCTGAATATACTGCTTCTCGTCATACTGAGTCTTGCCGTGGTCCTGGGCGCGTGCAGCAAGCGCCCGCGC AGTACCGCCGATGTGCCGCG
Product: Imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCEGDMQVDAHHTAEDVGMTLGK ALLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLEWRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRY GKNGHHLLESAAKGLGLALAHAVRRHGTTIRSTKGGLD
Sequences:
>Translated_198_residues MTTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCEGDMQVDAHHTAEDVGMTLGK ALLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLEWRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRY GKNGHHLLESAAKGLGLALAHAVRRHGTTIRSTKGGLD >Mature_197_residues TTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCEGDMQVDAHHTAEDVGMTLGKA LLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLEWRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRYG KNGHHLLESAAKGLGLALAHAVRRHGTTIRSTKGGLD
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=197, Percent_Identity=37.5634517766497, Blast_Score=130, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6324776, Length=178, Percent_Identity=39.8876404494382, Blast_Score=118, Evalue=7e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21595; Mature: 21464
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00954 IGP_DEHYDRATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCE CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GDMQVDAHHTAEDVGMTLGKALLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLE CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHEEECCCCCCCEE WRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRYGKNGHHLLESAAKGLGLALA ECCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHH HAVRRHGTTIRSTKGGLD HHHHHCCCEEECCCCCCC >Mature Secondary Structure TTAPRTSTQARTSAETDIRLELNLDGQGKTDIRTGFGLLDHMLTLTFFWAGMDLTLVCE CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEC GDMQVDAHHTAEDVGMTLGKALLEALGDRAGIARVGYGRVPMDEALAEVTVDLSGRPWLE CCEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHEEECCCCCCCEE WRGDELLPPVLAGEEKDLWREYYKALASGARCNLHVDMRYGKNGHHLLESAAKGLGLALA ECCCCCCCHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHH HAVRRHGTTIRSTKGGLD HHHHHCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA