| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904863
Identifier: 220904863
GI number: 220904863
Start: 1921020
End: 1921913
Strand: Direct
Name: 220904863
Synonym: Ddes_1597
Alternate gene names: NA
Gene position: 1921020-1921913 (Clockwise)
Preceding gene: 220904862
Following gene: 220904864
Centisome position: 66.85
GC content: 54.59
Gene sequence:
>894_bases GTGAGTAAAAAATTCATTCCCGTAAGCCTGGACGACAGCCAGCGCTACTATGACATCTGGCAACGCACCCCCCAGCGCTC GCTGGACTACACTCTTGCCAACCTCTGGGGCTGGCAGGAATACTACGGTCTTGAATGGTGCTTTGAAGACAGTATGTGCT GGATACGCCAGACCCGTCCTTATGAAGTATGCTGGGCCCCCGTGGGTGACTGGAATGCTGTGGACTGGAAAAGCCTTTTG CCCTGCTCGTTCAATGAAACCGCCCATGAAGTGGTGCGTGTACCCGAAGAATTGCTTCATGTCTGGCAGGAACGCCTGCC CGGCCTGGTAGACGCCGAAGAAGACAGGGGGCAATGGGAATACCTGTACAAGCAGGAAGAGCTTGCCGACCTGCCTGGCA ACCGTTTTCATAAAAAACGTAATCACTACAACAGCTACATCAAAAACTACGGCGAACCAGACTATCACGACCTGGACGAC CGCATGATCGAAGACGTGCTGGCCGTACAGGACGACTGGTGCCAGTGGCACGAATGCGAAGACTCCCCATCGCTGCGTGC CGAAAATGAGGCTATCAACCGTGTACTCAGCCACTGGAACAGCTTTCGCAGCCTTGTAGGCGGGTCGCTGTATGTGGATG GCAAGATGGTAGCTTTCAGCGTGGGCGAAAACCTTGACGGCACAAGCCTTGGAGTGCATTACGAAAAAGGCCTCAGCGGC TTCAAGGGCGTATACCAGACCATCAACTGCACGTTTGCCCGCCGCGCCGGAACCGGATTCACCTATATCAACCGCGCACA GGACCTGGACGAAGAAGGCTTGCGTCAGGCCAAAATGACCTACATGCCCACAGATTTTCTGCGCAAATACAAGGTACGCA TCCGCAAGGCATAA
Upstream 100 bases:
>100_bases GGATGCGCTTTGCCATGAGCAGGATCCGCCAGCCGCACCCTGCCTGACGGCCCGCAGAACCCTTGTGCTTTCCGCGCGGG CCTTTCCAAGGAGAACAACC
Downstream 100 bases:
>100_bases GCTTTTGCACTGCATGCCCACATGCAGCGGCGGAACGGCCCGGGCAGGCCCCTGGTCGTTCCGCTTTCATTTTTCCCCGG GAACCGGCATGAGCCACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 296
Protein sequence:
>297_residues MSKKFIPVSLDDSQRYYDIWQRTPQRSLDYTLANLWGWQEYYGLEWCFEDSMCWIRQTRPYEVCWAPVGDWNAVDWKSLL PCSFNETAHEVVRVPEELLHVWQERLPGLVDAEEDRGQWEYLYKQEELADLPGNRFHKKRNHYNSYIKNYGEPDYHDLDD RMIEDVLAVQDDWCQWHECEDSPSLRAENEAINRVLSHWNSFRSLVGGSLYVDGKMVAFSVGENLDGTSLGVHYEKGLSG FKGVYQTINCTFARRAGTGFTYINRAQDLDEEGLRQAKMTYMPTDFLRKYKVRIRKA
Sequences:
>Translated_297_residues MSKKFIPVSLDDSQRYYDIWQRTPQRSLDYTLANLWGWQEYYGLEWCFEDSMCWIRQTRPYEVCWAPVGDWNAVDWKSLL PCSFNETAHEVVRVPEELLHVWQERLPGLVDAEEDRGQWEYLYKQEELADLPGNRFHKKRNHYNSYIKNYGEPDYHDLDD RMIEDVLAVQDDWCQWHECEDSPSLRAENEAINRVLSHWNSFRSLVGGSLYVDGKMVAFSVGENLDGTSLGVHYEKGLSG FKGVYQTINCTFARRAGTGFTYINRAQDLDEEGLRQAKMTYMPTDFLRKYKVRIRKA >Mature_296_residues SKKFIPVSLDDSQRYYDIWQRTPQRSLDYTLANLWGWQEYYGLEWCFEDSMCWIRQTRPYEVCWAPVGDWNAVDWKSLLP CSFNETAHEVVRVPEELLHVWQERLPGLVDAEEDRGQWEYLYKQEELADLPGNRFHKKRNHYNSYIKNYGEPDYHDLDDR MIEDVLAVQDDWCQWHECEDSPSLRAENEAINRVLSHWNSFRSLVGGSLYVDGKMVAFSVGENLDGTSLGVHYEKGLSGF KGVYQTINCTFARRAGTGFTYINRAQDLDEEGLRQAKMTYMPTDFLRKYKVRIRKA
Specific function: Unknown
COG id: COG4866
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35078; Mature: 34947
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKFIPVSLDDSQRYYDIWQRTPQRSLDYTLANLWGWQEYYGLEWCFEDSMCWIRQTRP CCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCEEEECCCEEEEECCCC YEVCWAPVGDWNAVDWKSLLPCSFNETAHEVVRVPEELLHVWQERLPGLVDAEEDRGQWE CEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHH YLYKQEELADLPGNRFHKKRNHYNSYIKNYGEPDYHDLDDRMIEDVLAVQDDWCQWHECE HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DSPSLRAENEAINRVLSHWNSFRSLVGGSLYVDGKMVAFSVGENLDGTSLGVHYEKGLSG CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEECEEHHHCCHH FKGVYQTINCTFARRAGTGFTYINRAQDLDEEGLRQAKMTYMPTDFLRKYKVRIRKA HHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC >Mature Secondary Structure SKKFIPVSLDDSQRYYDIWQRTPQRSLDYTLANLWGWQEYYGLEWCFEDSMCWIRQTRP CCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHCHHHHHCCEEEECCCEEEEECCCC YEVCWAPVGDWNAVDWKSLLPCSFNETAHEVVRVPEELLHVWQERLPGLVDAEEDRGQWE CEEEEECCCCCCCCCHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHH YLYKQEELADLPGNRFHKKRNHYNSYIKNYGEPDYHDLDDRMIEDVLAVQDDWCQWHECE HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DSPSLRAENEAINRVLSHWNSFRSLVGGSLYVDGKMVAFSVGENLDGTSLGVHYEKGLSG CCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCEECEEHHHCCHH FKGVYQTINCTFARRAGTGFTYINRAQDLDEEGLRQAKMTYMPTDFLRKYKVRIRKA HHHHHHHHHHHEECCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA