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The map label for this gene is ynfA [C]

Identifier: 220904864

GI number: 220904864

Start: 1922081

End: 1922413

Strand: Direct

Name: ynfA [C]

Synonym: Ddes_1598

Alternate gene names: 220904864

Gene position: 1922081-1922413 (Clockwise)

Preceding gene: 220904863

Following gene: 220904865

Centisome position: 66.89

GC content: 60.36

Gene sequence:

>333_bases
ATGATCCTGAAAACATTTCTGCTGTTTGTGGTCACGGCTGTTGCCGAAATCGTGGGCTGCTACCTGCCTTATGTCTGGCT
GCGCGAGGGCGGCTCTCCCTGGCTTCTGGTCCCGGCGGCTCTGAGCCTGGCCGCCTTTGCCTGGCTTTTGACCATGCACC
CTGCCGCCAGTGGGCGGGTATATGCTGCTTATGGGTGCGTGTATGTGGCAACTGCCCTGGCGTGGCTCAAATTTGTAGAT
GGCGTGAACCTTTCCACCACCGACATGATAGGCGGCGGCGTGGCTCTGGCCGGGATGCTTATCATTGTTTCCGGCTGGGG
CAGCCCGGCCTGA

Upstream 100 bases:

>100_bases
CATTTTTCCCCGGGAACCGGCATGAGCCACTCGACCCCGGCCCGCGCTTCTGGCATTCTGGCCGTGAGGGGTTTCGTCAA
CTGCGGAAAAGAAGAAAAAG

Downstream 100 bases:

>100_bases
CCCCATACGCACAACACAAAAAGGGGCGCGAAGGTGGCAACCTTCACGCCCCTGAAAAAATACAAACGGCACACCAATCG
GCAAACTGCGCTGCATTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MILKTFLLFVVTAVAEIVGCYLPYVWLREGGSPWLLVPAALSLAAFAWLLTMHPAASGRVYAAYGCVYVATALAWLKFVD
GVNLSTTDMIGGGVALAGMLIIVSGWGSPA

Sequences:

>Translated_110_residues
MILKTFLLFVVTAVAEIVGCYLPYVWLREGGSPWLLVPAALSLAAFAWLLTMHPAASGRVYAAYGCVYVATALAWLKFVD
GVNLSTTDMIGGGVALAGMLIIVSGWGSPA
>Mature_110_residues
MILKTFLLFVVTAVAEIVGCYLPYVWLREGGSPWLLVPAALSLAAFAWLLTMHPAASGRVYAAYGCVYVATALAWLKFVD
GVNLSTTDMIGGGVALAGMLIIVSGWGSPA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=107, Percent_Identity=63.5514018691589, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11566; Mature: 11566

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKTFLLFVVTAVAEIVGCYLPYVWLREGGSPWLLVPAALSLAAFAWLLTMHPAASGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE
YAAYGCVYVATALAWLKFVDGVNLSTTDMIGGGVALAGMLIIVSGWGSPA
EHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHEECCCCCC
>Mature Secondary Structure
MILKTFLLFVVTAVAEIVGCYLPYVWLREGGSPWLLVPAALSLAAFAWLLTMHPAASGRV
CHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCE
YAAYGCVYVATALAWLKFVDGVNLSTTDMIGGGVALAGMLIIVSGWGSPA
EHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA