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The map label for this gene is tolR [H]

Identifier: 220904728

GI number: 220904728

Start: 1748253

End: 1748729

Strand: Direct

Name: tolR [H]

Synonym: Ddes_1460

Alternate gene names: 220904728

Gene position: 1748253-1748729 (Clockwise)

Preceding gene: 220904727

Following gene: 220904729

Centisome position: 60.84

GC content: 54.51

Gene sequence:

>477_bases
ATGGCCTCATCCGCTGATGACGATTTTGTTGCCGACATCAACGTAACCCCATTTGTGGACGTCATGCTGGTATTGCTGAT
CATTTTTATGGTCACGGCCCCCATGATGACAGAAGGAATTGATGTGGCCCTGCCCAAGGTGGAAACTTCAGAAGTTCTGC
CCACAGAGGACGACCATATCATCCTGACCATCAAGTCCAATGGAGCGCTATTTCTTGACGATTATGAAACAGGCATGGCC
GACCTGCCCGACGTGCTCGGTGTGCGCGTAAAAAATGCCGGGCGGCAGCTTTTTGTGCGTGCCGACAAGGACGTGCCCTA
CGGCATGGTCATGCATGTTATGGACCGTGTACGTGGAGCGGGCATCAGCGATGTGGGGCTTGTGACCACATCCGTCCCCG
ATTTCGACGACAGCACAGGCGGCAATACGGCGGACGTACCCGCAGCTTCGCAAAAGAAAGAGGGCAATCTGCCATGA

Upstream 100 bases:

>100_bases
AAGGCGTGTGCATCAACTACGCCGGTCAGCTGCTCAACCGCCTGCAACATGAAGCGCCGGAATACAGCAAAGGCATCAAC
TTTGCCGGGGAGCGCTGAGT

Downstream 100 bases:

>100_bases
AGGTAGCCGCTCGTGGCACAACCCTGTTTTTTTCCCTGGGTATGCACTCTTTGCTGCTGGGCGGTTTGTTGTTTCTGGCT
AGAGAAACGCCCAATACCAC

Product: Biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MASSADDDFVADINVTPFVDVMLVLLIIFMVTAPMMTEGIDVALPKVETSEVLPTEDDHIILTIKSNGALFLDDYETGMA
DLPDVLGVRVKNAGRQLFVRADKDVPYGMVMHVMDRVRGAGISDVGLVTTSVPDFDDSTGGNTADVPAASQKKEGNLP

Sequences:

>Translated_158_residues
MASSADDDFVADINVTPFVDVMLVLLIIFMVTAPMMTEGIDVALPKVETSEVLPTEDDHIILTIKSNGALFLDDYETGMA
DLPDVLGVRVKNAGRQLFVRADKDVPYGMVMHVMDRVRGAGISDVGLVTTSVPDFDDSTGGNTADVPAASQKKEGNLP
>Mature_157_residues
ASSADDDFVADINVTPFVDVMLVLLIIFMVTAPMMTEGIDVALPKVETSEVLPTEDDHIILTIKSNGALFLDDYETGMAD
LPDVLGVRVKNAGRQLFVRADKDVPYGMVMHVMDRVRGAGISDVGLVTTSVPDFDDSTGGNTADVPAASQKKEGNLP

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=126, Percent_Identity=39.6825396825397, Blast_Score=80, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16885; Mature: 16754

Theoretical pI: Translated: 3.97; Mature: 3.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSADDDFVADINVTPFVDVMLVLLIIFMVTAPMMTEGIDVALPKVETSEVLPTEDDHI
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEE
ILTIKSNGALFLDDYETGMADLPDVLGVRVKNAGRQLFVRADKDVPYGMVMHVMDRVRGA
EEEEECCCEEEEECCCCCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCC
GISDVGLVTTSVPDFDDSTGGNTADVPAASQKKEGNLP
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ASSADDDFVADINVTPFVDVMLVLLIIFMVTAPMMTEGIDVALPKVETSEVLPTEDDHI
CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEE
ILTIKSNGALFLDDYETGMADLPDVLGVRVKNAGRQLFVRADKDVPYGMVMHVMDRVRGA
EEEEECCCEEEEECCCCCCCCCCHHHHEEECCCCEEEEEEECCCCCHHHHHHHHHHHHCC
GISDVGLVTTSVPDFDDSTGGNTADVPAASQKKEGNLP
CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]