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The map label for this gene is tonB [C]

Identifier: 220904729

GI number: 220904729

Start: 1748726

End: 1749403

Strand: Direct

Name: tonB [C]

Synonym: Ddes_1461

Alternate gene names: 220904729

Gene position: 1748726-1749403 (Clockwise)

Preceding gene: 220904728

Following gene: 220904731

Centisome position: 60.86

GC content: 58.41

Gene sequence:

>678_bases
ATGAAGGTAGCCGCTCGTGGCACAACCCTGTTTTTTTCCCTGGGTATGCACTCTTTGCTGCTGGGCGGTTTGTTGTTTCT
GGCTAGAGAAACGCCCAATACCACGGAAAGAGTGTACCGTGTAGCGCTTGCCGAATTTGCCCCGACCCCCAGCCTGCCAC
CACCACAGGCGGCAGCTGAACCGCCTGCGCCGCCTCCGCCTCCAGCACCAAAAAAGCAGGAAGTTCAGCCTCAAAAGCCT
GTGGAACCAAAACCGGATGTAAAAAAAATCAGCCCCAAAAAGAACAATGTCCCCCTGCCCAAAGAGCAGGCGGCCCCTCC
ACGGCCGGAGGCACTGACACCTCCTGCGCCCGCCGGGCCGCAACCCCGCACCGTGGGTGGTTTCAGTGCGTATGAGAGCG
ACTCGCTGGACCAACGCCCGAGTATTACCCGGCGTGTTGTTCCCGAATACCCCATCAAAGCCCGACGCATGAATGTCCAG
GGTTCCGTCAAGGTGCGTCTTGTGGTGGATTCCTCCGGCCAGCCCCGTAACTGCGAAATTATCAGCGCAACACCGGATGG
CTATTTTGAAGAGGCTGCGCTCAAGGCAGCCCAAAGGATGCGCTTTGCGCCCGGCAAACTCAAAGGGCAACCGGTAAACA
CTCTGGTAGTGATTCCCTTTGCGTTCAGCCTGCGGTAG

Upstream 100 bases:

>100_bases
TGGGGCTTGTGACCACATCCGTCCCCGATTTCGACGACAGCACAGGCGGCAATACGGCGGACGTACCCGCAGCTTCGCAA
AAGAAAGAGGGCAATCTGCC

Downstream 100 bases:

>100_bases
GGACCTTCGCTCATGAACAGTTACACAAAATCCGCATGATCCCCACAAAAAATATCTGTCCGCGAAAGCCCGCAATCGCG
GGCTTTCCTTTTTACACGAC

Product: TonB family protein

Products: NA

Alternate protein names: NB Protein; NB-Like; NB Domain-Containing Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKVAARGTTLFFSLGMHSLLLGGLLFLARETPNTTERVYRVALAEFAPTPSLPPPQAAAEPPAPPPPPAPKKQEVQPQKP
VEPKPDVKKISPKKNNVPLPKEQAAPPRPEALTPPAPAGPQPRTVGGFSAYESDSLDQRPSITRRVVPEYPIKARRMNVQ
GSVKVRLVVDSSGQPRNCEIISATPDGYFEEAALKAAQRMRFAPGKLKGQPVNTLVVIPFAFSLR

Sequences:

>Translated_225_residues
MKVAARGTTLFFSLGMHSLLLGGLLFLARETPNTTERVYRVALAEFAPTPSLPPPQAAAEPPAPPPPPAPKKQEVQPQKP
VEPKPDVKKISPKKNNVPLPKEQAAPPRPEALTPPAPAGPQPRTVGGFSAYESDSLDQRPSITRRVVPEYPIKARRMNVQ
GSVKVRLVVDSSGQPRNCEIISATPDGYFEEAALKAAQRMRFAPGKLKGQPVNTLVVIPFAFSLR
>Mature_225_residues
MKVAARGTTLFFSLGMHSLLLGGLLFLARETPNTTERVYRVALAEFAPTPSLPPPQAAAEPPAPPPPPAPKKQEVQPQKP
VEPKPDVKKISPKKNNVPLPKEQAAPPRPEALTPPAPAGPQPRTVGGFSAYESDSLDQRPSITRRVVPEYPIKARRMNVQ
GSVKVRLVVDSSGQPRNCEIISATPDGYFEEAALKAAQRMRFAPGKLKGQPVNTLVVIPFAFSLR

Specific function: Interacts With Outer Membrane Receptor Proteins That Carry Out High-Affinity Binding And Energy Dependent Uptake Into The Periplasmic Space Of Specific Substrates Such As Cobalamin, And Various Iron Compounds (Such As Iron Dicitrate, Enterochelin, Aerobac

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Periplasmic Protein. Anchored To The Cytoplasm Membrane VIa Its N-Terminal Signal-Like Sequence, Spans The Periplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24329; Mature: 24329

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAARGTTLFFSLGMHSLLLGGLLFLARETPNTTERVYRVALAEFAPTPSLPPPQAAAE
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PPAPPPPPAPKKQEVQPQKPVEPKPDVKKISPKKNNVPLPKEQAAPPRPEALTPPAPAGP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
QPRTVGGFSAYESDSLDQRPSITRRVVPEYPIKARRMNVQGSVKVRLVVDSSGQPRNCEI
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEE
ISATPDGYFEEAALKAAQRMRFAPGKLKGQPVNTLVVIPFAFSLR
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MKVAARGTTLFFSLGMHSLLLGGLLFLARETPNTTERVYRVALAEFAPTPSLPPPQAAAE
CCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PPAPPPPPAPKKQEVQPQKPVEPKPDVKKISPKKNNVPLPKEQAAPPRPEALTPPAPAGP
CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCC
QPRTVGGFSAYESDSLDQRPSITRRVVPEYPIKARRMNVQGSVKVRLVVDSSGQPRNCEI
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCEEEEEEECCCCCCCCCEE
ISATPDGYFEEAALKAAQRMRFAPGKLKGQPVNTLVVIPFAFSLR
EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA