| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is prs [H]
Identifier: 220904719
GI number: 220904719
Start: 1739188
End: 1740135
Strand: Direct
Name: prs [H]
Synonym: Ddes_1451
Alternate gene names: 220904719
Gene position: 1739188-1740135 (Clockwise)
Preceding gene: 220904718
Following gene: 220904720
Centisome position: 60.53
GC content: 57.7
Gene sequence:
>948_bases ATGTTCAGCGATCTTAAGATCGTAACCGGTTCTTCCAATCCGGAATTGGCCAAGGCCATTTGCAACCATCTGGGCTGTCA GCTCACCCCAACGCTGTCCACCACGTTCAGCGACGGGGAGTTGCGTATTGAAATCGGCGATAATGTCCGCGGCGACGATG TTTTTGTGGTGCAACCCACTTGTCCGCCCACGGTCAACCGTAACCTTGTTCAGCTGTGCCTTATGCTTGACGCCCTTAAA AGGGCGAGCGCGGGCCGCATTACAGCCGTTATTCCCTATTACGGCTATGCGCGGCAAGACCGCAAGGTCAGCCCCCGTGC GCCCATAAGCGCCAAGATGGTGGCCGACTTCATCAGCGTGGCCGGAGCAGAACGCGTGGTGACTATTGATCTGCACGCAG GGCAGATCCAGGGCTACTTTGATTGCCCTGTGGACAACCTTTTTGCCGTACCTGTAATGCTCGATGCCCTGCGCAAGCTC GGCGAAGAAAAAATTGTCATCGTCTCGCCCGACGCCGGCGGCGTTGAACGGGCCAGGGCCTACGCCAAGCGCCTTGATGC GCCCCTGGCTATTGTGGACAAAAGACGCGACAAGCCCAACCAGGCGCAGGCCATGCACGTCATTGGCGACGTGCAGGACC GGGTAGCCATTGTGGTGGACGACATGATCGACACCGCGGGAACCTTGTGCGCCGGGGCCGAAGTTCTGATGAAAAACGGA GCGAAAAAGATCGTGGCCTGTGCCACGCATCCGGTGTTGTCCGGTCCGGCCATTGATCGCATCAATGCCACCGAAGCCCT TTCACAGGTCTTTGTCACCGACACCATCCCGCTGGGCGACAAGCTGGAACGATGCCCGAAACTCGAAGTCATCTCGGTGG CGGCGATTCTGGGCAAAACCATTCACAACATTCACACCGGTTCTTCGGTCAGCGTGTTGTTTGTTTAG
Upstream 100 bases:
>100_bases GCATCCGGCCATGGCGGCGACAGGCCAGCCAACTTCGTGACCGGCGGCAGGCAAGGGTGTACAACCTAAATGCTCTTTGA CGCGCAAGGCGGGGCGGTTC
Downstream 100 bases:
>100_bases CAAAAACCGTCGGCGCAAAGCCTTCGCGCACGGCCGTACGGCGCACATCCCGCAAGGGAATGGCAAGATACAATAAAGAA AGCGCTGATCCATGCGGATT
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MFSDLKIVTGSSNPELAKAICNHLGCQLTPTLSTTFSDGELRIEIGDNVRGDDVFVVQPTCPPTVNRNLVQLCLMLDALK RASAGRITAVIPYYGYARQDRKVSPRAPISAKMVADFISVAGAERVVTIDLHAGQIQGYFDCPVDNLFAVPVMLDALRKL GEEKIVIVSPDAGGVERARAYAKRLDAPLAIVDKRRDKPNQAQAMHVIGDVQDRVAIVVDDMIDTAGTLCAGAEVLMKNG AKKIVACATHPVLSGPAIDRINATEALSQVFVTDTIPLGDKLERCPKLEVISVAAILGKTIHNIHTGSSVSVLFV
Sequences:
>Translated_315_residues MFSDLKIVTGSSNPELAKAICNHLGCQLTPTLSTTFSDGELRIEIGDNVRGDDVFVVQPTCPPTVNRNLVQLCLMLDALK RASAGRITAVIPYYGYARQDRKVSPRAPISAKMVADFISVAGAERVVTIDLHAGQIQGYFDCPVDNLFAVPVMLDALRKL GEEKIVIVSPDAGGVERARAYAKRLDAPLAIVDKRRDKPNQAQAMHVIGDVQDRVAIVVDDMIDTAGTLCAGAEVLMKNG AKKIVACATHPVLSGPAIDRINATEALSQVFVTDTIPLGDKLERCPKLEVISVAAILGKTIHNIHTGSSVSVLFV >Mature_315_residues MFSDLKIVTGSSNPELAKAICNHLGCQLTPTLSTTFSDGELRIEIGDNVRGDDVFVVQPTCPPTVNRNLVQLCLMLDALK RASAGRITAVIPYYGYARQDRKVSPRAPISAKMVADFISVAGAERVVTIDLHAGQIQGYFDCPVDNLFAVPVMLDALRKL GEEKIVIVSPDAGGVERARAYAKRLDAPLAIVDKRRDKPNQAQAMHVIGDVQDRVAIVVDDMIDTAGTLCAGAEVLMKNG AKKIVACATHPVLSGPAIDRINATEALSQVFVTDTIPLGDKLERCPKLEVISVAAILGKTIHNIHTGSSVSVLFV
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=313, Percent_Identity=48.2428115015974, Blast_Score=304, Evalue=9e-83, Organism=Homo sapiens, GI4506127, Length=313, Percent_Identity=48.8817891373802, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI84875539, Length=316, Percent_Identity=47.7848101265823, Blast_Score=298, Evalue=3e-81, Organism=Homo sapiens, GI28557709, Length=313, Percent_Identity=46.9648562300319, Blast_Score=289, Evalue=2e-78, Organism=Homo sapiens, GI194018537, Length=334, Percent_Identity=36.5269461077844, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI4506133, Length=339, Percent_Identity=35.3982300884956, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI310128524, Length=148, Percent_Identity=33.7837837837838, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI310115209, Length=148, Percent_Identity=33.7837837837838, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI310118259, Length=148, Percent_Identity=33.7837837837838, Blast_Score=85, Evalue=7e-17, Organism=Homo sapiens, GI310119946, Length=148, Percent_Identity=33.7837837837838, Blast_Score=85, Evalue=7e-17, Organism=Escherichia coli, GI1787458, Length=313, Percent_Identity=51.1182108626198, Blast_Score=325, Evalue=3e-90, Organism=Caenorhabditis elegans, GI25149168, Length=313, Percent_Identity=44.0894568690096, Blast_Score=285, Evalue=3e-77, Organism=Caenorhabditis elegans, GI17554702, Length=313, Percent_Identity=44.0894568690096, Blast_Score=284, Evalue=5e-77, Organism=Caenorhabditis elegans, GI71989924, Length=313, Percent_Identity=44.0894568690096, Blast_Score=283, Evalue=1e-76, Organism=Caenorhabditis elegans, GI17554704, Length=310, Percent_Identity=44.1935483870968, Blast_Score=281, Evalue=3e-76, Organism=Caenorhabditis elegans, GI17570245, Length=341, Percent_Identity=33.4310850439883, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6321776, Length=300, Percent_Identity=45, Blast_Score=274, Evalue=1e-74, Organism=Saccharomyces cerevisiae, GI6319403, Length=316, Percent_Identity=39.5569620253165, Blast_Score=241, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6320946, Length=314, Percent_Identity=38.2165605095541, Blast_Score=232, Evalue=5e-62, Organism=Saccharomyces cerevisiae, GI6322667, Length=202, Percent_Identity=38.6138613861386, Blast_Score=148, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6324511, Length=114, Percent_Identity=36.8421052631579, Blast_Score=84, Evalue=4e-17, Organism=Drosophila melanogaster, GI21355239, Length=313, Percent_Identity=46.6453674121406, Blast_Score=287, Evalue=6e-78, Organism=Drosophila melanogaster, GI45551540, Length=336, Percent_Identity=43.452380952381, Blast_Score=275, Evalue=4e-74, Organism=Drosophila melanogaster, GI24651458, Length=357, Percent_Identity=31.6526610644258, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24651456, Length=357, Percent_Identity=31.6526610644258, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI281362873, Length=357, Percent_Identity=31.6526610644258, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI24651454, Length=357, Percent_Identity=31.6526610644258, Blast_Score=172, Evalue=2e-43, Organism=Drosophila melanogaster, GI45552010, Length=376, Percent_Identity=30.0531914893617, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24651462, Length=376, Percent_Identity=30.0531914893617, Blast_Score=161, Evalue=5e-40, Organism=Drosophila melanogaster, GI24651464, Length=376, Percent_Identity=30.0531914893617, Blast_Score=161, Evalue=5e-40,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 33735; Mature: 33735
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00103 PUR_PYR_PR_TRANSFER ; PS00114 PRPP_SYNTHETASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSDLKIVTGSSNPELAKAICNHLGCQLTPTLSTTFSDGELRIEIGDNVRGDDVFVVQPT CCCCEEEEECCCCHHHHHHHHHHCCCEEECCCEEEECCCEEEEEECCCCCCCEEEEECCC CPPTVNRNLVQLCLMLDALKRASAGRITAVIPYYGYARQDRKVSPRAPISAKMVADFISV CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH AGAERVVTIDLHAGQIQGYFDCPVDNLFAVPVMLDALRKLGEEKIVIVSPDAGGVERARA CCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH YAKRLDAPLAIVDKRRDKPNQAQAMHVIGDVQDRVAIVVDDMIDTAGTLCAGAEVLMKNG HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC AKKIVACATHPVLSGPAIDRINATEALSQVFVTDTIPLGDKLERCPKLEVISVAAILGKT CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHH IHNIHTGSSVSVLFV HHHCCCCCCEEEEEC >Mature Secondary Structure MFSDLKIVTGSSNPELAKAICNHLGCQLTPTLSTTFSDGELRIEIGDNVRGDDVFVVQPT CCCCEEEEECCCCHHHHHHHHHHCCCEEECCCEEEECCCEEEEEECCCCCCCEEEEECCC CPPTVNRNLVQLCLMLDALKRASAGRITAVIPYYGYARQDRKVSPRAPISAKMVADFISV CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH AGAERVVTIDLHAGQIQGYFDCPVDNLFAVPVMLDALRKLGEEKIVIVSPDAGGVERARA CCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHH YAKRLDAPLAIVDKRRDKPNQAQAMHVIGDVQDRVAIVVDDMIDTAGTLCAGAEVLMKNG HHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCC AKKIVACATHPVLSGPAIDRINATEALSQVFVTDTIPLGDKLERCPKLEVISVAAILGKT CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHH IHNIHTGSSVSVLFV HHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA