| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904370
Identifier: 220904370
GI number: 220904370
Start: 1290224
End: 1290655
Strand: Direct
Name: 220904370
Synonym: Ddes_1098
Alternate gene names: NA
Gene position: 1290224-1290655 (Clockwise)
Preceding gene: 220904369
Following gene: 220904371
Centisome position: 44.9
GC content: 50.46
Gene sequence:
>432_bases GTGAAAAAGTCAGTTTTGAGCCTTGGGCTGGTTCTTGCTCTGGTTCTGGTCTGCGCTCCCGTTCGCGCTGCGGAAGTCGC TGCTGGCGATGTAGCACAAAATAATCCCGTGGAACAGCTTACGGGACATGTATGGCAAAAAACCAGCGAGACTGATAAGG CCGCATTCCTGCTTGGTGTGGAATCCGCTATTACCGTAGAATATTTTGTTAATGCCAAACTGGCGGAAAAAGCTGCCAAA TCCGGCAAAAAACCTGCTTATACCCTTTCGCCTTTTGAAAAGGGCTGGATGAATGCCTTCAAGGGAGTCAACCGTGCTGA GATTATCACCATGGTAGACCAGTGGTACGCTGCCAATCCCGACAGGCTTGACCGTCCGGTAATGAGCGTTATCTGGTATG AACTGATCGCCCCCCGCATTGCCAAGAAGTAA
Upstream 100 bases:
>100_bases TACTTGATATACAGGTATGCTTGTGGCTAAAGTACATTCACTGTACGAGGTTTTTACTGGCGGCGCATGCCGCCTCGCCT TAAACTGCAAGGAGCTTCGC
Downstream 100 bases:
>100_bases GGTACCTGCCCTTGGGGCGATAACAGGACTCAGGAGAATAGCCATGAAGAAAGCTTTGATTATAGGCCTGTTGGCCGTCA TGTTTACCAGTGGCGTGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 143
Protein sequence:
>143_residues MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK
Sequences:
>Translated_143_residues MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK >Mature_143_residues MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15675; Mature: 15675
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGV CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEC ESAITVEYFVNAKLAEKAAKSGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANP CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DRLDRPVMSVIWYELIAPRIAKK HHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGV CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEC ESAITVEYFVNAKLAEKAAKSGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANP CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC DRLDRPVMSVIWYELIAPRIAKK HHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA