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The map label for this gene is recO [H]

Identifier: 220904187

GI number: 220904187

Start: 1064407

End: 1065159

Strand: Direct

Name: recO [H]

Synonym: Ddes_0914

Alternate gene names: 220904187

Gene position: 1064407-1065159 (Clockwise)

Preceding gene: 220904186

Following gene: 220904188

Centisome position: 37.04

GC content: 62.68

Gene sequence:

>753_bases
ATGACAGAATGGGCCGATCACGCGCTTGTGCTGCGCATGGGGCACTTTCGTGAGTCGGACCTCTGGCTGAAAACCCTGTG
CCGCAAGCATGGCCTGCTGACGCTGTTCGCTTTTGGGGGCAGCAGAAGCAGGCGTCGTTTTTGTGGCTGCCTGGACGTGC
TCAACAGCCTGCACTGCCGCGTTAAAACATCGCCGCGCGGCGGCTTTTTGAACCTTGAAGAAGCGGTTTTGCTTGGCGGG
CCACAGGCACTCAGGCAAGACTGGCGACGCATGGGCCTTGCGGCCAACTGCCTGCGCTTTGTGGAAGCCCTTGGCGTGAA
TGACGACGGCGCGGACGAGGCTTTCGCGCTGGTTGAGGACATGAGGCGCACGCTCGAAGAAGCCCCGGCCCTGCCTGCGC
TTTTTCCTCTTTTTTTCCGTCTTCGCCTCGCCGGAGCGCTGGGTTTTGCCCCGAGCCTTGACGTGTGCGGCCTGTGCGGC
GCTGACCTGTGCGGCTCTGTACAGTTTGTAGTGGATGAAGGCCATGTGCGCTGCCCATCGTGCCGTGCGCAGGCCGGCCC
CGTGCGCTACGGGGTGGAATTGAGCGCCGGCGGGCTTGACCTTTTACGCCATGTGCAGCAAGAATTGCCATCCGGCTGGC
ACGCGGAGGAATTGCCCTCGGCGGACCGGCGGGCCTGTTCCAGGGTTATCGACGGCTTTGTCCAGTATCATCTGGGACTG
GCGTGGGAGGGGGGATTTTTTCGCCGCGTGTAG

Upstream 100 bases:

>100_bases
GCAACGCCGGCGGAGTACGCATCCGCTATAACGGCGAAGAACTTCCGCCTGTGGGCGGCAGCGGCCAGGTCCGCACCCTT
ACCTTTCCCCCGGCTCGGCA

Downstream 100 bases:

>100_bases
ATGGCCGGTTTTCGCCGCCCCTGTTTTGCGGTTTTGCGGGTCAGCCCGGCCATATCTGCCCATTCCGGGATGGCCATGCT
GGAGCGTTTTCACTTTGAAA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTEWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCRVKTSPRGGFLNLEEAVLLGG
PQALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVEDMRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCG
ADLCGSVQFVVDEGHVRCPSCRAQAGPVRYGVELSAGGLDLLRHVQQELPSGWHAEELPSADRRACSRVIDGFVQYHLGL
AWEGGFFRRV

Sequences:

>Translated_250_residues
MTEWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCRVKTSPRGGFLNLEEAVLLGG
PQALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVEDMRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCG
ADLCGSVQFVVDEGHVRCPSCRAQAGPVRYGVELSAGGLDLLRHVQQELPSGWHAEELPSADRRACSRVIDGFVQYHLGL
AWEGGFFRRV
>Mature_249_residues
TEWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCRVKTSPRGGFLNLEEAVLLGGP
QALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVEDMRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCGA
DLCGSVQFVVDEGHVRCPSCRAQAGPVRYGVELSAGGLDLLRHVQQELPSGWHAEELPSADRRACSRVIDGFVQYHLGLA
WEGGFFRRV

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27623; Mature: 27492

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCR
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCEE
VKTSPRGGFLNLEEAVLLGGPQALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVED
EEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCGADLCGSVQFVVDEGHVRCPS
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCEEEEEECCCEECCC
CRAQAGPVRYGVELSAGGLDLLRHVQQELPSGWHAEELPSADRRACSRVIDGFVQYHLGL
CCCCCCCEEECEEECCCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC
AWEGGFFRRV
EECCCHHCCC
>Mature Secondary Structure 
TEWADHALVLRMGHFRESDLWLKTLCRKHGLLTLFAFGGSRSRRRFCGCLDVLNSLHCR
CCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHCEE
VKTSPRGGFLNLEEAVLLGGPQALRQDWRRMGLAANCLRFVEALGVNDDGADEAFALVED
EEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
MRRTLEEAPALPALFPLFFRLRLAGALGFAPSLDVCGLCGADLCGSVQFVVDEGHVRCPS
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCEEEEEECCCEECCC
CRAQAGPVRYGVELSAGGLDLLRHVQQELPSGWHAEELPSADRRACSRVIDGFVQYHLGL
CCCCCCCEEECEEECCCHHHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHCC
AWEGGFFRRV
EECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA