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The map label for this gene is rodZ [H]

Identifier: 220904186

GI number: 220904186

Start: 1063466

End: 1064410

Strand: Direct

Name: rodZ [H]

Synonym: Ddes_0913

Alternate gene names: 220904186

Gene position: 1063466-1064410 (Clockwise)

Preceding gene: 220904185

Following gene: 220904187

Centisome position: 37.01

GC content: 64.55

Gene sequence:

>945_bases
ATGACCTTAGAGGAATTGGGTGCGGCCCTGCGCGCCGAGCGTGAGCAGAGGGGGCTGAGCATCGAGGATGCGGCCAATCA
TCTGAAGATAGGTGCACGCCTTTTGCGCGCCCTTGAGGCGGGAGATACATCCTCCCTGCCGCATCTTGCGTATACCAAAG
GGTTTATCCGTTCCTATTCCGCCTATGTGGGCCTTTCCGCCGAAGAGGTGGGCGCGGCTCTGGCAACACTGGAAGCCAAC
AGTGAGGAAGCTGCCGCGCAGCATGCGGGGCCGCCGGAAATCTATCTGGCCCCGCGCCGCAGCCTCAAGCCTTTTTTTGT
GGCGCTCGTGCTGATCCTGCTGGGGCTTGGTGTTTATGTGGCCTGGCAGCAGGGCGCGCTGGAATTTTTGAGCAGTCAGA
CCCGGCGTATGGCGCAACCCGCGCCCATGCAGCGTCCTGACACGGCTGACAACCCGTCTCCGCTTTCCACAGCCCGGCCC
GGGCCGGAGGCCGCGCGTACAGACAGCCCCGCCGGGCAGTCCGGCGGCGCGGATTTGCCTGCTGCTGCCACAGCCGCCCA
GGCTGCAGCGCCCGCGGGGGCGCAGCGGTCCGAGGTTGTGACCGGTTCTCAGGCCGCTCCAGCGGCTGCCACGGCGTCTG
CGCCTGCATCCGCTGCCGCTCCCGCCGCAGCGGCAAATCCTGAAAGCATCGCGGTAGCCGGGCCGCACAAGGTCATCATC
ACTGCCACCGAAGAATGCTGGGTGCATTCCAGCGCCGACAATACCGATACCAGGCAGTTTTCATTGCGCAAGGGCGATAC
CTTTGCCCTTACCTTCAACAAGAGCCTGGAACTGAAGCTTGGCAACGCCGGCGGAGTACGCATCCGCTATAACGGCGAAG
AACTTCCGCCTGTGGGCGGCAGCGGCCAGGTCCGCACCCTTACCTTTCCCCCGGCTCGGCAATGA

Upstream 100 bases:

>100_bases
CGCAGCGCCGTTCCGGTTGCGGCCGGGCCTGAAACGGCCCGCGCCGTGCCGCCGGCAACAGCCGCCCATGGGGCGGCAAA
GACCTTTACCGAGGCTTTGC

Downstream 100 bases:

>100_bases
CAGAATGGGCCGATCACGCGCTTGTGCTGCGCATGGGGCACTTTCGTGAGTCGGACCTCTGGCTGAAAACCCTGTGCCGC
AAGCATGGCCTGCTGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTLEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYSAYVGLSAEEVGAALATLEAN
SEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYVAWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARP
GPEAARTDSPAGQSGGADLPAAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPESIAVAGPHKVII
TATEECWVHSSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGEELPPVGGSGQVRTLTFPPARQ

Sequences:

>Translated_314_residues
MTLEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYSAYVGLSAEEVGAALATLEAN
SEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYVAWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARP
GPEAARTDSPAGQSGGADLPAAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPESIAVAGPHKVII
TATEECWVHSSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGEELPPVGGSGQVRTLTFPPARQ
>Mature_313_residues
TLEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYSAYVGLSAEEVGAALATLEANS
EEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYVAWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARPG
PEAARTDSPAGQSGGADLPAAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPESIAVAGPHKVIIT
ATEECWVHSSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGEELPPVGGSGQVRTLTFPPARQ

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 32422; Mature: 32290

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYS
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AYVGLSAEEVGAALATLEANSEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYV
HHHCCCHHHHHHHHHEEECCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
AWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARPGPEAARTDSPAGQSGGADLP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
AAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPESIAVAGPHKVII
HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
TATEECWVHSSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGEELPPVGG
EECHHHEEECCCCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCC
SGQVRTLTFPPARQ
CCCEEEEECCCCCC
>Mature Secondary Structure 
TLEELGAALRAEREQRGLSIEDAANHLKIGARLLRALEAGDTSSLPHLAYTKGFIRSYS
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AYVGLSAEEVGAALATLEANSEEAAAQHAGPPEIYLAPRRSLKPFFVALVLILLGLGVYV
HHHCCCHHHHHHHHHEEECCCHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
AWQQGALEFLSSQTRRMAQPAPMQRPDTADNPSPLSTARPGPEAARTDSPAGQSGGADLP
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
AAATAAQAAAPAGAQRSEVVTGSQAAPAAATASAPASAAAPAAAANPESIAVAGPHKVII
HHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEE
TATEECWVHSSADNTDTRQFSLRKGDTFALTFNKSLELKLGNAGGVRIRYNGEELPPVGG
EECHHHEEECCCCCCCCEEEEEECCCEEEEEECCEEEEEECCCCCEEEEECCCCCCCCCC
SGQVRTLTFPPARQ
CCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA