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The map label for this gene is yigC [C]

Identifier: 220904025

GI number: 220904025

Start: 884514

End: 886379

Strand: Direct

Name: yigC [C]

Synonym: Ddes_0751

Alternate gene names: 220904025

Gene position: 884514-886379 (Clockwise)

Preceding gene: 220904024

Following gene: 220904026

Centisome position: 30.78

GC content: 63.5

Gene sequence:

>1866_bases
ATGTCTTACCGCAACATGCAGGAATGCCTTGCCGATCTGGAAGCTCACGGCCACCTGAAGCGCATTGACGCAGAGGTGGA
TCCCTGTCTCGAGCTGGCGGCTATCCAGCGCCGTGCCTTCCGCGCCAATGCTCCGGCCCTGCTGTTCACGCGGGTAAAAG
GCACATCCTTTCCCATGCTGTGCAATCTTTTCGGCACCCGCGAGCGTCTGCACTATATTTTCAGGGACAGCCTGCCCGCA
GTGCATGCCGTGCTGGCGGCCAAGGCCGACCCGGCGGCCGCGCTTAAAAACCCCTGGCGCTCACTGGCAGCCGTTCCGGG
ATTGTGGCGTATGCTGCCGCGCACGCGCCACGCCGGAACAGGAGAGGGCGTGCCTGTGCTCGCACGGCGATGCGCCCCGG
CCGATCTGCCCCGGCTCACCTGCTGGCCGATGGACGGCGGGGCTTTTATTACCCTGCCCCTGGTTTATACCGAAGACCCG
GAAAAGCCGGGAACAGATGCCTCGAATCTGGGCATGTACCGGGTGCAGCAGAGCGGCAATGCCTATGCCCCGGACGAAAT
GGGCCTGCACTACCAGATCCACAGAGGTATCGGCGTGCATCATGCCCACGCCCTGGCCGCCGGACGCCCGCTGCCTGTTC
ATGTGTATGTGGGCGGCCCGCCAAGTCTTACCGTGGCTGCGGTCATGCCGCTGCCCGAGGGGCTGAGCGAACTGCGCTTC
GCCGGTCTGCTGGGCGGCCGCCGCATGGACCTTGCCCGGGTGGACGGCTTGCCCCTGCCGGTGCTGGCCGAAGCTGATTT
TTGCATCAGCGGGCATGTTTTGCCCGGCCTGAAGCCCGAAGGCCCTTTTGGCGATCATGTGGGTTACTATAGCCTTACGC
ATGATTTTCCCGTGTTCAGGGTGGATGCCGTATACCACCGCGAAGGGGCAGTCTGGCCGTTTACGGCGGTGGGGCGCCCG
CCTCAGGAAGATACTGTTTTCGGGGACTTTATTCATGAACTGACCGGCCCTCTTGTTCCCCAGGTTTTTCAGGGCGTACG
CGAGGTGCATGCTGTGGACGCGGCCGGGGTTCACCCCCTGCTGCTGGCACTGGGCAGCGAACGCTATACGCCGTATGAGG
CCGGGCGCAGGCCGCGCGAACTGCTCACGGCCGCCCTGCACCTGCTCGGAACCACACAGACGGCCCTTGCCAAATATGTT
CTTGTGGCTGCGCACGAAGATGCTCCGGGTCTGAGCGCCCGCCATGCGCCGGAATTTTTGCGGCACATGCTGGAACGCGC
GGATTTTTCCCGTGATCTGCACTTCATCACACACAGCACCAATGACACCCTGGATTATACGGGCCTTGGACTTAATGAGG
GTTCCAAGCTCATATGGGCTTCGGCTGGTGAAAAACGGCGGACTCTGGGGTTGGAGCTTACCGGTCCGGCGGCGGATATG
CCCTCGCTGCCCGAAGGTTTCGGGGATGTGCGGCTGGTCGGCCCCGGCATGCTTGTTGTGCGCGGTCCGGCGCATGCCCT
TGGACGCAACCAGCAGGATCCCGGTGTCGAGGCGCTGGCGCAGGCCTTGGCCCGCTGGCCCGGCCGTGAGGCATTTCCGC
TGGTTCTTGTTGTTGATGATGCGGATTTTTGCGCGGAAAATATGGACAATTTCCTTTGGGTGGCTTTTACCCGGTCTGAC
CCGGCCACGGATGTGTACGGCGCCCGCGCGCAGACGCGGGCCAAGCACTGGTCGTGTGAAGCCCCGCTGGTTATGGACGC
CCGCCTGAAACCCTTCCACGCTCCCCCCCTGGAAGAGGACCCGGCCATCACCCGCAGGGTGGATGCGCTGGCTGCTCCGG
GCGGGCCTTTGCACGGATATATCTAA

Upstream 100 bases:

>100_bases
CTGCCTGCGGCTGCCGCGCGGCTGACGACCCTGCGGGGGCTGCCATAGCCGTTGCGCCCGGAGAGGCCGCATCCGGTAAA
AGTGGAAAGGAGTTTTGTTG

Downstream 100 bases:

>100_bases
CTCGGGGGAGGCTGCGGATGAAGATAGCCCTTTTACAGTGCAACAGCGTTACCGGTGATGTCGCCGGAAACATGCAGCGC
ATTCTTGAAGCAAGCCGTCA

Product: carboxylyase-like protein

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MSYRNMQECLADLEAHGHLKRIDAEVDPCLELAAIQRRAFRANAPALLFTRVKGTSFPMLCNLFGTRERLHYIFRDSLPA
VHAVLAAKADPAAALKNPWRSLAAVPGLWRMLPRTRHAGTGEGVPVLARRCAPADLPRLTCWPMDGGAFITLPLVYTEDP
EKPGTDASNLGMYRVQQSGNAYAPDEMGLHYQIHRGIGVHHAHALAAGRPLPVHVYVGGPPSLTVAAVMPLPEGLSELRF
AGLLGGRRMDLARVDGLPLPVLAEADFCISGHVLPGLKPEGPFGDHVGYYSLTHDFPVFRVDAVYHREGAVWPFTAVGRP
PQEDTVFGDFIHELTGPLVPQVFQGVREVHAVDAAGVHPLLLALGSERYTPYEAGRRPRELLTAALHLLGTTQTALAKYV
LVAAHEDAPGLSARHAPEFLRHMLERADFSRDLHFITHSTNDTLDYTGLGLNEGSKLIWASAGEKRRTLGLELTGPAADM
PSLPEGFGDVRLVGPGMLVVRGPAHALGRNQQDPGVEALAQALARWPGREAFPLVLVVDDADFCAENMDNFLWVAFTRSD
PATDVYGARAQTRAKHWSCEAPLVMDARLKPFHAPPLEEDPAITRRVDALAAPGGPLHGYI

Sequences:

>Translated_621_residues
MSYRNMQECLADLEAHGHLKRIDAEVDPCLELAAIQRRAFRANAPALLFTRVKGTSFPMLCNLFGTRERLHYIFRDSLPA
VHAVLAAKADPAAALKNPWRSLAAVPGLWRMLPRTRHAGTGEGVPVLARRCAPADLPRLTCWPMDGGAFITLPLVYTEDP
EKPGTDASNLGMYRVQQSGNAYAPDEMGLHYQIHRGIGVHHAHALAAGRPLPVHVYVGGPPSLTVAAVMPLPEGLSELRF
AGLLGGRRMDLARVDGLPLPVLAEADFCISGHVLPGLKPEGPFGDHVGYYSLTHDFPVFRVDAVYHREGAVWPFTAVGRP
PQEDTVFGDFIHELTGPLVPQVFQGVREVHAVDAAGVHPLLLALGSERYTPYEAGRRPRELLTAALHLLGTTQTALAKYV
LVAAHEDAPGLSARHAPEFLRHMLERADFSRDLHFITHSTNDTLDYTGLGLNEGSKLIWASAGEKRRTLGLELTGPAADM
PSLPEGFGDVRLVGPGMLVVRGPAHALGRNQQDPGVEALAQALARWPGREAFPLVLVVDDADFCAENMDNFLWVAFTRSD
PATDVYGARAQTRAKHWSCEAPLVMDARLKPFHAPPLEEDPAITRRVDALAAPGGPLHGYI
>Mature_620_residues
SYRNMQECLADLEAHGHLKRIDAEVDPCLELAAIQRRAFRANAPALLFTRVKGTSFPMLCNLFGTRERLHYIFRDSLPAV
HAVLAAKADPAAALKNPWRSLAAVPGLWRMLPRTRHAGTGEGVPVLARRCAPADLPRLTCWPMDGGAFITLPLVYTEDPE
KPGTDASNLGMYRVQQSGNAYAPDEMGLHYQIHRGIGVHHAHALAAGRPLPVHVYVGGPPSLTVAAVMPLPEGLSELRFA
GLLGGRRMDLARVDGLPLPVLAEADFCISGHVLPGLKPEGPFGDHVGYYSLTHDFPVFRVDAVYHREGAVWPFTAVGRPP
QEDTVFGDFIHELTGPLVPQVFQGVREVHAVDAAGVHPLLLALGSERYTPYEAGRRPRELLTAALHLLGTTQTALAKYVL
VAAHEDAPGLSARHAPEFLRHMLERADFSRDLHFITHSTNDTLDYTGLGLNEGSKLIWASAGEKRRTLGLELTGPAADMP
SLPEGFGDVRLVGPGMLVVRGPAHALGRNQQDPGVEALAQALARWPGREAFPLVLVVDDADFCAENMDNFLWVAFTRSDP
ATDVYGARAQTRAKHWSCEAPLVMDARLKPFHAPPLEEDPAITRRVDALAAPGGPLHGYI

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=483, Percent_Identity=30.4347826086957, Blast_Score=202, Evalue=6e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR022390
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 67516; Mature: 67385

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYRNMQECLADLEAHGHLKRIDAEVDPCLELAAIQRRAFRANAPALLFTRVKGTSFPML
CCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
CNLFGTRERLHYIFRDSLPAVHAVLAAKADPAAALKNPWRSLAAVPGLWRMLPRTRHAGT
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGVPVLARRCAPADLPRLTCWPMDGGAFITLPLVYTEDPEKPGTDASNLGMYRVQQSGN
CCCHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCHHHCCEEEEECCCC
AYAPDEMGLHYQIHRGIGVHHAHALAAGRPLPVHVYVGGPPSLTVAAVMPLPEGLSELRF
CCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHH
AGLLGGRRMDLARVDGLPLPVLAEADFCISGHVLPGLKPEGPFGDHVGYYSLTHDFPVFR
HHHCCCCCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEE
VDAVYHREGAVWPFTAVGRPPQEDTVFGDFIHELTGPLVPQVFQGVREVHAVDAAGVHPL
EEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH
LLALGSERYTPYEAGRRPRELLTAALHLLGTTQTALAKYVLVAAHEDAPGLSARHAPEFL
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHH
RHMLERADFSRDLHFITHSTNDTLDYTGLGLNEGSKLIWASAGEKRRTLGLELTGPAADM
HHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCC
PSLPEGFGDVRLVGPGMLVVRGPAHALGRNQQDPGVEALAQALARWPGREAFPLVLVVDD
CCCCCCCCCEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC
ADFCAENMDNFLWVAFTRSDPATDVYGARAQTRAKHWSCEAPLVMDARLKPFHAPPLEED
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
PAITRRVDALAAPGGPLHGYI
CHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYRNMQECLADLEAHGHLKRIDAEVDPCLELAAIQRRAFRANAPALLFTRVKGTSFPML
CCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH
CNLFGTRERLHYIFRDSLPAVHAVLAAKADPAAALKNPWRSLAAVPGLWRMLPRTRHAGT
HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
GEGVPVLARRCAPADLPRLTCWPMDGGAFITLPLVYTEDPEKPGTDASNLGMYRVQQSGN
CCCHHHHHHHCCCCCCCCEEEEECCCCCEEEEEEEEECCCCCCCCCHHHCCEEEEECCCC
AYAPDEMGLHYQIHRGIGVHHAHALAAGRPLPVHVYVGGPPSLTVAAVMPLPEGLSELRF
CCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCHHHHHH
AGLLGGRRMDLARVDGLPLPVLAEADFCISGHVLPGLKPEGPFGDHVGYYSLTHDFPVFR
HHHCCCCCCCHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEECCCCEEE
VDAVYHREGAVWPFTAVGRPPQEDTVFGDFIHELTGPLVPQVFQGVREVHAVDAAGVHPL
EEEEEECCCCCCEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHH
LLALGSERYTPYEAGRRPRELLTAALHLLGTTQTALAKYVLVAAHEDAPGLSARHAPEFL
HHHHCCCCCCCHHHCCCHHHHHHHHHHHHCCCHHHHHHEEEEEECCCCCCCCCCCCHHHH
RHMLERADFSRDLHFITHSTNDTLDYTGLGLNEGSKLIWASAGEKRRTLGLELTGPAADM
HHHHHHCCCCCCEEEEEECCCCCCEEECCCCCCCCEEEEECCCCCCEEEEEEECCCCCCC
PSLPEGFGDVRLVGPGMLVVRGPAHALGRNQQDPGVEALAQALARWPGREAFPLVLVVDD
CCCCCCCCCEEEECCCEEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC
ADFCAENMDNFLWVAFTRSDPATDVYGARAQTRAKHWSCEAPLVMDARLKPFHAPPLEED
HHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
PAITRRVDALAAPGGPLHGYI
CHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]