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The map label for this gene is nudF [H]

Identifier: 220904024

GI number: 220904024

Start: 883876

End: 884514

Strand: Direct

Name: nudF [H]

Synonym: Ddes_0750

Alternate gene names: 220904024

Gene position: 883876-884514 (Clockwise)

Preceding gene: 220904022

Following gene: 220904025

Centisome position: 30.76

GC content: 63.07

Gene sequence:

>639_bases
ATGAAGAAAGACGTTGTCTGCCCGCATTGCGGCAAGCCGTATTCCTGTTTTCGCAATCCTGCGCCCACTGCCGACGTGGT
CATTTACGAACCGGGCAGAGGGGTGGCTATTATCCGCCGCCGTCATGCCCCGGTGGGTTTTGCCCTGCCGGGAGGCTTTA
TTGACGAGGGTGAACAGGCCGAAGCCGCCGCTGTTCGCGAAATGCGCGAAGAAACCGGGCTGGATGTGGAATTGACAGGC
CTGCTTGGCGTCTATTCGCGGCCCAAACGCGATCCGCGCCAGCATACGCTTACGGTGGTGTACACGGGCAGGGCGCGTAA
TCCCGAAGCCATCACGGCAGGGGATGACGCGGCCCATGCGGCTTTTTATCCGCTGGACGGCCTGCCCGAGCCGCTGGTTT
TTGACCATGCGGAAATACTGGAACATTTCAGGCAGGTGCTGTCCGGGAAGCGGACCGTGGCGGCAGTGCAGCCTCTGGCC
TGTCACCATCTGCCGTCTCTGGATGCCCAGAGCGGCTCTGACGCTGCCGGCTCCGGCGCTGCCTGCGGCTGCCGCGCGGC
TGACGACCCTGCGGGGGCTGCCATAGCCGTTGCGCCCGGAGAGGCCGCATCCGGTAAAAGTGGAAAGGAGTTTTGTTGA

Upstream 100 bases:

>100_bases
AAGGCCCGCGCCATTGTCCGCTCTTGCGGCCCGGCGCGTGCTGGCTTAGTATGCCTGTGCCTGCGGCCTGCGCCGTGCGG
CATGCAAGCCTGAGGTCAGC

Downstream 100 bases:

>100_bases
TGTCTTACCGCAACATGCAGGAATGCCTTGCCGATCTGGAAGCTCACGGCCACCTGAAGCGCATTGACGCAGAGGTGGAT
CCCTGTCTCGAGCTGGCGGC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKKDVVCPHCGKPYSCFRNPAPTADVVIYEPGRGVAIIRRRHAPVGFALPGGFIDEGEQAEAAAVREMREETGLDVELTG
LLGVYSRPKRDPRQHTLTVVYTGRARNPEAITAGDDAAHAAFYPLDGLPEPLVFDHAEILEHFRQVLSGKRTVAAVQPLA
CHHLPSLDAQSGSDAAGSGAACGCRAADDPAGAAIAVAPGEAASGKSGKEFC

Sequences:

>Translated_212_residues
MKKDVVCPHCGKPYSCFRNPAPTADVVIYEPGRGVAIIRRRHAPVGFALPGGFIDEGEQAEAAAVREMREETGLDVELTG
LLGVYSRPKRDPRQHTLTVVYTGRARNPEAITAGDDAAHAAFYPLDGLPEPLVFDHAEILEHFRQVLSGKRTVAAVQPLA
CHHLPSLDAQSGSDAAGSGAACGCRAADDPAGAAIAVAPGEAASGKSGKEFC
>Mature_212_residues
MKKDVVCPHCGKPYSCFRNPAPTADVVIYEPGRGVAIIRRRHAPVGFALPGGFIDEGEQAEAAAVREMREETGLDVELTG
LLGVYSRPKRDPRQHTLTVVYTGRARNPEAITAGDDAAHAAFYPLDGLPEPLVFDHAEILEHFRQVLSGKRTVAAVQPLA
CHHLPSLDAQSGSDAAGSGAACGCRAADDPAGAAIAVAPGEAASGKSGKEFC

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: =3.6.1.13 [H]

Molecular weight: Translated: 22236; Mature: 22236

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKDVVCPHCGKPYSCFRNPAPTADVVIYEPGRGVAIIRRRHAPVGFALPGGFIDEGEQA
CCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCH
EAAAVREMREETGLDVELTGLLGVYSRPKRDPRQHTLTVVYTGRARNPEAITAGDDAAHA
HHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCE
AFYPLDGLPEPLVFDHAEILEHFRQVLSGKRTVAAVQPLACHHLPSLDAQSGSDAAGSGA
EECCCCCCCCCHHCCHHHHHHHHHHHHCCCCEEEHHCCHHHHCCCCCCCCCCCCCCCCCC
ACGCRAADDPAGAAIAVAPGEAASGKSGKEFC
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKDVVCPHCGKPYSCFRNPAPTADVVIYEPGRGVAIIRRRHAPVGFALPGGFIDEGEQA
CCCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCCCCCCCCCH
EAAAVREMREETGLDVELTGLLGVYSRPKRDPRQHTLTVVYTGRARNPEAITAGDDAAHA
HHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCEEEEEEEECCCCCCCEEECCCCCCCE
AFYPLDGLPEPLVFDHAEILEHFRQVLSGKRTVAAVQPLACHHLPSLDAQSGSDAAGSGA
EECCCCCCCCCHHCCHHHHHHHHHHHHCCCCEEEHHCCHHHHCCCCCCCCCCCCCCCCCC
ACGCRAADDPAGAAIAVAPGEAASGKSGKEFC
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 9694840 [H]