Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904005

Identifier: 220904005

GI number: 220904005

Start: 856208

End: 857899

Strand: Direct

Name: 220904005

Synonym: Ddes_0731

Alternate gene names: NA

Gene position: 856208-857899 (Clockwise)

Preceding gene: 220904004

Following gene: 220904006

Centisome position: 29.8

GC content: 61.35

Gene sequence:

>1692_bases
ATGCCTGCCGTTCCGCGTCCGGGGGCCTGCCGTCCGGTTTTTGCGCGCCGTATGCTTATGGCTTTTGTGTTTCTGGCCCT
CGGCATGGGGGCTGCCCTTGGCCTTGCTGCGCATCTGTCTTTTGAATATCTGGGCAGCTATCTTGTGGGCTGGCATGCAA
GGCCGGTGATGGAAACCCTTATCGAGGCCGAAAAGCGCGCCTGGGAAGCGGAAGACAGTGGCCGGGACCGGCTGTATTAC
GGTGAAGATCTGGCAACGGCCATGCACTGGACGTTTCTTGTGGGCAAGCAGGTTTCGCCGCAATGGCGGGAACTGCCCGA
TGGCCTGCACTTTATGGATGACGGCAAGGAATTTGTTCTGATCGAGCGTCGTGATGGGGTGGAGTACGCGCTCAAGGGCG
GCACGGGAGCTTTTCAGGCGCTGAAAAGCCGGTTTAACGGCATCCTGCTGTTCTGCGCTCTGACCGGGCTTGCTGTGGCT
GTCGCTCTGGCCGTTATTTTGAGCCGCCGCCTCACCGGACCGCTGCGCCGTCTCACCCTCGCGGTGGAAAGCCGCCTGCC
GGGCGGCCTGTCTTTTTCCGCAACAGGCGCGGCCGAAAATATGGCGACCGCCATGCCCGGGGGACCTGACGCCGCCCGGC
AGAGTCTGACGCAAACTCCGTGTCCGCCGGATTCCGTCCTGCTCGCAGACCCGGGCCAGATCATGCGTCCGCACATGTCG
CCCGGGCCTGTACCCATGACGGATATGGACGACGAGGTGGGTGTTCTCGCCCGCGCCATTGCCGCCCGTGAGGAGGCGCT
CTACCGTTTCGTGCAGCGCGAAAGCCATTTTACCGGCGACGTAAGCCACGAACTGCGCACACCGCTGACGGTCATGCAGG
GCGGGCTTGAAGTTCTTGAGGCACGTCTGCAGAATCTGGTCAGAGCGACCCCTCAGGCCGGAGAGCTTGTTCCTGTTGTG
GGGCGTCTTTTGCGTACCACATCCGACATGACCCGCACCGTACGCACGCTTCTTTTGCTGGCCCGGAAACCCGGAGAAAT
ACAGGCTGCTGCGCTGGACTGTTCGCTGATTTTGCGGGATATCATAAACGAAATGGAGCGCGAAGGTGTTGTATGTCCGG
TGGAGTTTCCGCAGACGCCTTCACACGCTCAGGCAGACAGTCTGGCCGCCATGCTGGCACTGCTCGAGGGCGGCGATCGC
CTGCCCGAATTGACTCCGGTGGCGGCTTCGTCAGTGGTCTGGTCCAGGCTACAGGAAGCAGCCCCGGCTGATCCGCGTTC
CTCTGGCGCTGCCGGGGTGTTTCTGGCCGTGGGCCTGTCCTCGCCTGTTCCGGTATGCGGACAAAAAGAGCTGATAACCG
TCATATTCAAGAATTTGCTGGACAATGCCCGCCAGTACACCGAAAATAGGCGCGCTTTTGTATTGCTTGAGTCCGGCAGG
ATGCTGGTCGGCAATAAGGGCCACATTGTTCGTGATGTGGATATTTTTTCGCGCGGCGTCAGCCGCTCCTGTAACAACGG
TCAGCAATCCGCCCGGGAAGGGGCGGGCAACGGGCTGGGGCTTTCCCTTGCCCAGCGGGCCTGCGAGCGTATGGGCTGGC
GGCTCGAGCTTGCGTCACTTCCCGCAGGCGTGGATGGAGTGACCGTTTTCAGCCTTATTTTCCCCCCGGCAGCCCAAGGA
GAAGACGTATAA

Upstream 100 bases:

>100_bases
GTCCGGACGCATCTGAAGAAGACGAAGCACCCGAACCGGGCATGCCGGGTGCGGGGAGTGGCTCTTCCGGCATGAAGATA
GCCGGCGCGGAGAACACCTG

Downstream 100 bases:

>100_bases
TGCCCGTTATTCAACATAGGCCTGTTTCCGGCCTGCTTTCAGGACGCCGCAAGGCAGTGGTCCTGATACTGGCCCTTCTG
GCTCTTGCCGCGGGCTGGAA

Product: histidine kinase

Products: NA

Alternate protein names: Sensor Histidine Kinase ColS

Number of amino acids: Translated: 563; Mature: 562

Protein sequence:

>563_residues
MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYY
GEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVA
VALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS
PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVV
GRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDR
LPELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR
MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQG
EDV

Sequences:

>Translated_563_residues
MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYY
GEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVA
VALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS
PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVV
GRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDR
LPELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR
MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQG
EDV
>Mature_562_residues
PAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYYG
EDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAV
ALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMSP
GPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVVG
RLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRL
PELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGRM
LVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQGE
DV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60647; Mature: 60516

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEAEKRAWEAEDSGRDRLYYGEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVL
HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEE
IERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAVALAVILSRRLTGPLRRLTL
EECCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
AVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS
HHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCC
PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH
ARLQNLVRATPQAGELVPVVGRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRLPELTPVAASSVVWSRLQEA
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
APADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASL
EEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCC
PAGVDGVTVFSLIFPPAAQGEDV
CCCCCHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IEAEKRAWEAEDSGRDRLYYGEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVL
HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEE
IERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAVALAVILSRRLTGPLRRLTL
EECCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
AVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS
HHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCC
PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLE
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH
ARLQNLVRATPQAGELVPVVGRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRD
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
IINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRLPELTPVAASSVVWSRLQEA
HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
APADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR
CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASL
EEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCC
PAGVDGVTVFSLIFPPAAQGEDV
CCCCCHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA