| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903897
Identifier: 220903897
GI number: 220903897
Start: 751627
End: 753012
Strand: Direct
Name: 220903897
Synonym: Ddes_0622
Alternate gene names: NA
Gene position: 751627-753012 (Clockwise)
Preceding gene: 220903896
Following gene: 220903898
Centisome position: 26.16
GC content: 61.98
Gene sequence:
>1386_bases ATGCTTTCCGAACGCGAAGTCATAAGCACCCTTAACATGCTCCGCAACGAGCACCTGGACGTGCGCACCGTCACCCTGGG CGTGAGCCTGTTTGACTGCGTGAGCCACGACCTGGAGCTTTTTACCGCCAATGTGCAGGCCAAAATCCGCCGTTATGCCT CACAGCTTGTTTCTGTCTGTGACGAGGTGGGAGACAAGTACGGCATTCCCGTGGTGAACAAGCGCATCAGCGTCAGCCCC ATTGCGGTGGTGGCCGCGCCCTTTGGCCCGGACGGCATGGTGCGTGTCTGCAAAGCCCTGGACGAGGCCGCCAAAGAGGC GGGCGTGGATTTTCTGGGCGGTTTTTCCGCCCTGGTTGAAAAGGGTTTTGCCAATGGCGACCGTGCCCTTATCGAGGCGC TGCCCGAAGCCCTCGCGCAGACTGACCGCATATGCTCGTCCATCAACGTGGCATCGTCGCGCAGCGGCATCAATATGGAC GCTGTGGCGCTTATGGGGCGGCAGATCCTCAGGGTGGCCGAAGCCACGGCCGACCGTGGCGGCATAGGCTGTGCCAAGCT GGTGGTTTTTGCCAACATTCCGCAGGACGTGCCCTTCATGGCCGGGGCCTACCTTGGGGTGGGTGAACCTGATGTGGTGA TCAACGTGGGCGTTTCCGGCCCCGGTGTGGTGAAGAAGGCCCTGGACCGGGCCCGCGAGGCGGGCCGCAATGAAAAGGGC GCGCCCCTGACCCTGCTGGACATGGCCGAGGTGATCAAGCGCACGGCGTACAAGGTGACCCGCGTGGGTGAAATGATCGG TACTGAAGTGGCTACCCGTCTGGGCATACCCTTTGGCGTGGCAGACCTCTCCCTGGCCCCCACCCCGGCGGTGGGCGACT CCGTGGGCGAGATTTTCCAGAGCCTTGGGCTTTCAAGCATCGGCGCACCCGGTACAACAGCGGTGCTTGCCATGCTCAAT GACGCGGTGAAAAAAGGCGGGGCGTTTGCCTCCTCTTCGGTGGGCGGTCTTTCGGGGGCCTTTATTCCCGTATCGGAAGA TTCAAGCATTGAGGCGGCCGCTACCGCAGGCCTGCTCAGCATTGAAAAACTGGAAGCCATGACGAGCGTATGCTCGGTGG GGCTGGACATGATCGCCATCCCCGGCGATACCCCGGCGGCTACCATTTCCGGCATTATCGCCGATGAAATGGCGATCGGC ATGATCAACCACAAGACCACGGCTGTACGCCTCATACCTGTACCCGGCAAGGGCGTGGGTGAGGAGGTGTCGTTTGGCGG CCTGCTCGGCAAGGCGGCCATCATGCCCGTGCCGGGCGGCAATGCTGAAGACTTTATCACCCTTGGGGGGCGCATTCCCG CCCCTATCCACAGCCTGAAAAACTGA
Upstream 100 bases:
>100_bases GCAAACGCCGTAGCGAGTGAGTCTTCACCTTGAGAACGCATATCATCAAAACCGATCTGATCCAGAGCGTTTTAGCCTTG CAACCATACAGGATACCGCC
Downstream 100 bases:
>100_bases TGCCGTTTGCAACCATGCCAGTATAAATGAAAAATCCCGCTTCGGCGGGATTTTTCATTTATACTGGCATGGTAAAACCT GCGGGGCAGCACGGCGCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN
Sequences:
>Translated_461_residues MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN >Mature_461_residues MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN
Specific function: Unknown
COG id: COG2848
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0210 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y622_DESDA (B8IYD5)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002479209.1 - ProteinModelPortal: B8IYD5 - GeneID: 7284294 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_0622 - HOGENOM: HBG296656 - ProtClustDB: PRK05313 - HAMAP: MF_01221 - InterPro: IPR007841
Pfam domain/function: PF05167 DUF711
EC number: NA
Molecular weight: Translated: 47374; Mature: 47374
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVC CCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVGDKYGIPVVNKRISVSPIAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVE HHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMDAVALMGRQILRVAEATADRG HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG CCCHHHHEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH SLGLSSIGAPGTTAVLAMLNDAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLS HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH IEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIGMINHKTTAVRLIPVPGKGVG HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCC EEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN CCCCCCHHECCCEEEECCCCCCCCEEEECCCCCCCHHHCCC >Mature Secondary Structure MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVC CCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DEVGDKYGIPVVNKRISVSPIAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVE HHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH KGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMDAVALMGRQILRVAEATADRG HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC GIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG CCCHHHHEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH SLGLSSIGAPGTTAVLAMLNDAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLS HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH IEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIGMINHKTTAVRLIPVPGKGVG HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCC EEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN CCCCCCHHECCCEEEECCCCCCCCEEEECCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA