| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is 220903862
Identifier: 220903862
GI number: 220903862
Start: 712317
End: 713039
Strand: Direct
Name: 220903862
Synonym: Ddes_0587
Alternate gene names: NA
Gene position: 712317-713039 (Clockwise)
Preceding gene: 220903860
Following gene: 220903863
Centisome position: 24.79
GC content: 56.43
Gene sequence:
>723_bases ATGGCACGATTTACAGGGTTTGATGAAGTTTACAGCGCTCTTTATGTTGATTTTGACAACATTTTTACCCGTTTTCTTGA AATCGACCCGGAGGCGGCCCGTGCCTTCGGCGCCACGCCGTACCGCTGGGTGCGCTGGATCGAAAACCACGCCTTGCGCA TTCTTTACGGTGAGGGCGTGCGCCGCCGCATCCTGAAGCGCATGTGTTATCTCAATCCGCAGCGGTATCAGGAGTTTCGC AACTCTTTCATCCGCAGTGCCTTTCAGGTGGTGGATTGCCCGCCCCTGACATCCCGGGGCAAAACCAGCACGGATATTCA TCTGGTCATGGACTGTATGGATGATCTTTCGCATTCCACCAAGTTTGACGAGTTTATCATACTTTCCGGCGATGCCGACT TTACTCCACTGCTCATCCGCCTTCAGGAACACGCCCGGCGCACCCTTGTGCTTTCAGTGGGGTATTCTTCTCCGGCCTAT ACGGCTGCGGCTTCTTGGCGCATCCGTGAAGACTGGTTTTTGCAGCAGGCCCTGCGCGATGACCGTGATGACCTGGATGG AGATACCGGTGATGTTTCAGGCAAGCCATCCCCCCATGCCACACTGGTGCAGGCGGCGGCCCGTGCGCCCGAAGGCCATA ACGGCTACGATAATCGCGATGATGCCTTTCCCGCAGATGATGCCGATAACGGCGAAGGACCATCGCCCGGCAACGCCTGG TAA
Upstream 100 bases:
>100_bases TATCCCGCACTCTCTGTTTGTTCAAGTGCGGCAAAAACCTTGCCATGCGTTGGCATGCAAAATATACTGAGATAGTTCGT TATCTTACCATGAGGATAAT
Downstream 100 bases:
>100_bases AAGATCTTGCCCAATCGGCGTGTTCCGCGGCGTTGGCGCTTGACGCAGGACGCGCCCGAAGCTAAAGATGATCACGCTTT CTTTTGGTTGCCCGCCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MARFTGFDEVYSALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGVRRRILKRMCYLNPQRYQEFR NSFIRSAFQVVDCPPLTSRGKTSTDIHLVMDCMDDLSHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAY TAAASWRIREDWFLQQALRDDRDDLDGDTGDVSGKPSPHATLVQAAARAPEGHNGYDNRDDAFPADDADNGEGPSPGNAW
Sequences:
>Translated_240_residues MARFTGFDEVYSALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGVRRRILKRMCYLNPQRYQEFR NSFIRSAFQVVDCPPLTSRGKTSTDIHLVMDCMDDLSHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAY TAAASWRIREDWFLQQALRDDRDDLDGDTGDVSGKPSPHATLVQAAARAPEGHNGYDNRDDAFPADDADNGEGPSPGNAW >Mature_239_residues ARFTGFDEVYSALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGVRRRILKRMCYLNPQRYQEFRN SFIRSAFQVVDCPPLTSRGKTSTDIHLVMDCMDDLSHSTKFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYT AAASWRIREDWFLQQALRDDRDDLDGDTGDVSGKPSPHATLVQAAARAPEGHNGYDNRDDAFPADDADNGEGPSPGNAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27292; Mature: 27160
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFTGFDEVYSALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGV CCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCEEEEECCCH RRRILKRMCYLNPQRYQEFRNSFIRSAFQVVDCPPLTSRGKTSTDIHLVMDCMDDLSHST HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC KFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTAAASWRIREDWFLQQALRD CCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHC DRDDLDGDTGDVSGKPSPHATLVQAAARAPEGHNGYDNRDDAFPADDADNGEGPSPGNAW CHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARFTGFDEVYSALYVDFDNIFTRFLEIDPEAARAFGATPYRWVRWIENHALRILYGEGV CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHCCEEEEECCCH RRRILKRMCYLNPQRYQEFRNSFIRSAFQVVDCPPLTSRGKTSTDIHLVMDCMDDLSHST HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCC KFDEFIILSGDADFTPLLIRLQEHARRTLVLSVGYSSPAYTAAASWRIREDWFLQQALRD CCCCEEEECCCCCHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHCCCHHHHHHHHHHHHC DRDDLDGDTGDVSGKPSPHATLVQAAARAPEGHNGYDNRDDAFPADDADNGEGPSPGNAW CHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA