Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903824

Identifier: 220903824

GI number: 220903824

Start: 659852

End: 662230

Strand: Reverse

Name: 220903824

Synonym: Ddes_0548

Alternate gene names: NA

Gene position: 662230-659852 (Counterclockwise)

Preceding gene: 220903825

Following gene: 220903823

Centisome position: 23.05

GC content: 65.32

Gene sequence:

>2379_bases
ATGACCCAGAACTCCACCCTGCCCGAGGACGGCCAGCCCAAGCGCATGGACAATGCCGACCAGCACCTTTCTTCCGGGCC
GGGGCAGGAAACTCAGGCAGCCGCGACCGACCGGGAACAGGAAACAGCCTGTCCGGCCCCCAGTGCGGACACGGATGAAC
AGCACGCTGCGGCAGACTGCCCCTGTGCTGCGCCGCATGCCGGGCCAGACTCCAGGCCAGACGCCGGAACCGGCGCAATG
CCGGATGCAGTGCCAAACAGCATGCATGAACAGTCCTGCAGCCACCCCGAAGAAGCGCAGGCAGGCCACCCCCCGGCCGA
CGACAGCCAGGCTGCCGGTACAGCCAAAAAGCGGGGCGTGTTCTCATCCTGGCGCGGCAAAGGCGCCCGCAGCACCGGGG
CCGCCGCGCCCCAAAACGCCGTGGCAGCCGGTATCAAGGCAGCAATGACACCCCCGGAACCAAACGCCGCACAGAAGTTT
TTTGAAGCCGCCAGCCGCGTGGGGCCGTTCTTTCTGCTTTTGCTCCTCCTGGCCCAGGCCTGGCCCGCCTTTATGGGCAA
CGCCCTGTACTGCCCGCGCGAAGCGGAGAGCATCTTCATCTTCAGCCAGACCAGCCAGAACGGTCTGTGGCTGACCCCGG
CCGCACCGGGTCTGGCACACTGGCCTGTGTACCACTGGTATCTTGCGGGCATGCAAAGCCTCGTGGCTCTGGCAGGACCC
GGCTTCGGGCATCTGCTCTTTCCCATGGCGGCCCTGGCGGGCGCTCTGCTTTGCCTCATGAGCGTCTGGACGCTGGCCCG
CGTTGCTGGTCTTGGCGCCCAGGCAGCGCTGGCCGGCGGCATGATCCTTCTTTCCGCGCCGCTCTTTGTTCCTATGGCCC
ATTTTACCGGGCCTGAAAATCTCGCCACGGCCCTTACGCTCTTTTCTCTGGCGCTGCTCTGCCACGGTTGGCAAAAGCCT
CACGCCTGGGCAAGCCTGCCCGCCGGTTTCATCCTGGCGGGTCTGGCCGGACTTACGGGCGGAATTTTTCAGTTAATGCT
GCCTCTTGTGGCCAGTGTTTTCTTCCTGAGCTGGCGCGGAACCTTCCGCCGGGCGCAGGGCATGGACGGTGTGACCGGTT
TTGTGCTGCTCCTGCTGCTGCTGGCCTGCTGGCTTGGCGGCGTCATGCTGTGGCAACAGCCTGAAGGCTACCTCAAATTT
CTGGGCGAACGCCTTATTCTCTGGCCCTGGCCCAGTGCCCAATGGTGGCTGCCTCTGCTTGTGGCGGCAGCGGGCCTGCT
GCCCTGGGCCGCCATTATGGCCTGCGTTTCGTGGGTTCGTGTGCTGCGCACCGCCCCCGCCGATCTGGCAGCCTCCCGCA
AGGAGCGCTCGGGCATTGCCTTTTTGTGGATCAGCCTGGCTGTGGCCTGCGTATTGAGTCTGGCTGCCTATGACCCGGCC
TCCGCTGCCCTTACCATCATCTGCCTGGCCTCGCCCCTGCTGGGCAAGGCCCTGCTGCGCCTTTCCGGCCTCGGCGGCCG
CCTGTTCTTCATTTTTGCGGCCCTGTGCCTTCTGCATGCGGGCATGGCTCTGGCGGCAGCCGGCTTTGGCCCCACCCTGG
ACTGGATGGGCGGCTTCTTCAAGTTCAGCCTCAGCCCCGAACAGCGGGAAATGGTGCTCGGCCTCAAGGCTCTGCCCATT
CTCGGCAGCATATGCATAGTGGCCGCCGTCCTTCTAAGCCGCATGGTGCGCAAGGGCGCGCATGGGGGCATGGGCGGGGC
ACTGCTTATCTGCGCCGTTATTGTGATCCTGCTGGCCCAGCCCGGCACCATGCTGCTTGGTCCGCAGTTAAAGGCCGTAC
CGCAGGCACAACTGCGCCACCTTGAAGAACTGTTGCAGCCCCAGGCCGCACCCGTGCCCGCAATAGAAAGCCCCGAAGCG
GTGGCCCCTGCGCCGGAAGAGCGCGCGCACGAACCGGCAACGCCGGAAACAGCGGTGCCGCAGACTCATGCCGCCCCTGC
TGACACGGCAAGCCCCGTTGAAAAAGCGCTGGAAAAAGCCGCTTCTGAAGCAGCCGCTTACGACGCCCGTGCAGCCGAAG
AAATGGAAAAATGCAACGCTGCCCCCGCACAGGATGCGGAAGACGCCGCCACGCCCGGTCCTGTGGCAGTGCCGGGTATA
GCCGAACCTTCCGCCACTGAAGGCGCGGCAACCGAAGCAGCGCCCGACAACGCGGCACAGGACGAACAGGCCGCCGCTGC
TGGCGAAGACGATGCCAAGGTTCAGGGCGCGCAGCCCGAAGAGCCTGTGGCAGCCACGCCAGAAGCCCCCGCTGCCCCGG
AAGCCGAAAGGGCAAACGCAGACAATGCCTCCGCTCCGGAAAAAGAGCAGTCGAAGTAA

Upstream 100 bases:

>100_bases
TGCCCGTGCAAGGGCGCACTGTGGAACTTGACCTAGACTCCCGCCAGTCCCGGCATATTCTGCTCACGGGGCAGGCGGCA
ACACCTGAAGGAGCGAACCC

Downstream 100 bases:

>100_bases
TAAACACGCATAACCTGCCTACCCGGAGGCCCCCTGTCCCTTGCCGGACAGGGGGCCTCTTTTTGAACCAGCTGCCGCCC
CGCGGCAAGCAGGATATTGC

Product: 4-amino-4-deoxy-L-arabinose transferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 792; Mature: 791

Protein sequence:

>792_residues
MTQNSTLPEDGQPKRMDNADQHLSSGPGQETQAAATDREQETACPAPSADTDEQHAAADCPCAAPHAGPDSRPDAGTGAM
PDAVPNSMHEQSCSHPEEAQAGHPPADDSQAAGTAKKRGVFSSWRGKGARSTGAAAPQNAVAAGIKAAMTPPEPNAAQKF
FEAASRVGPFFLLLLLLAQAWPAFMGNALYCPREAESIFIFSQTSQNGLWLTPAAPGLAHWPVYHWYLAGMQSLVALAGP
GFGHLLFPMAALAGALLCLMSVWTLARVAGLGAQAALAGGMILLSAPLFVPMAHFTGPENLATALTLFSLALLCHGWQKP
HAWASLPAGFILAGLAGLTGGIFQLMLPLVASVFFLSWRGTFRRAQGMDGVTGFVLLLLLLACWLGGVMLWQQPEGYLKF
LGERLILWPWPSAQWWLPLLVAAAGLLPWAAIMACVSWVRVLRTAPADLAASRKERSGIAFLWISLAVACVLSLAAYDPA
SAALTIICLASPLLGKALLRLSGLGGRLFFIFAALCLLHAGMALAAAGFGPTLDWMGGFFKFSLSPEQREMVLGLKALPI
LGSICIVAAVLLSRMVRKGAHGGMGGALLICAVIVILLAQPGTMLLGPQLKAVPQAQLRHLEELLQPQAAPVPAIESPEA
VAPAPEERAHEPATPETAVPQTHAAPADTASPVEKALEKAASEAAAYDARAAEEMEKCNAAPAQDAEDAATPGPVAVPGI
AEPSATEGAATEAAPDNAAQDEQAAAAGEDDAKVQGAQPEEPVAATPEAPAAPEAERANADNASAPEKEQSK

Sequences:

>Translated_792_residues
MTQNSTLPEDGQPKRMDNADQHLSSGPGQETQAAATDREQETACPAPSADTDEQHAAADCPCAAPHAGPDSRPDAGTGAM
PDAVPNSMHEQSCSHPEEAQAGHPPADDSQAAGTAKKRGVFSSWRGKGARSTGAAAPQNAVAAGIKAAMTPPEPNAAQKF
FEAASRVGPFFLLLLLLAQAWPAFMGNALYCPREAESIFIFSQTSQNGLWLTPAAPGLAHWPVYHWYLAGMQSLVALAGP
GFGHLLFPMAALAGALLCLMSVWTLARVAGLGAQAALAGGMILLSAPLFVPMAHFTGPENLATALTLFSLALLCHGWQKP
HAWASLPAGFILAGLAGLTGGIFQLMLPLVASVFFLSWRGTFRRAQGMDGVTGFVLLLLLLACWLGGVMLWQQPEGYLKF
LGERLILWPWPSAQWWLPLLVAAAGLLPWAAIMACVSWVRVLRTAPADLAASRKERSGIAFLWISLAVACVLSLAAYDPA
SAALTIICLASPLLGKALLRLSGLGGRLFFIFAALCLLHAGMALAAAGFGPTLDWMGGFFKFSLSPEQREMVLGLKALPI
LGSICIVAAVLLSRMVRKGAHGGMGGALLICAVIVILLAQPGTMLLGPQLKAVPQAQLRHLEELLQPQAAPVPAIESPEA
VAPAPEERAHEPATPETAVPQTHAAPADTASPVEKALEKAASEAAAYDARAAEEMEKCNAAPAQDAEDAATPGPVAVPGI
AEPSATEGAATEAAPDNAAQDEQAAAAGEDDAKVQGAQPEEPVAATPEAPAAPEAERANADNASAPEKEQSK
>Mature_791_residues
TQNSTLPEDGQPKRMDNADQHLSSGPGQETQAAATDREQETACPAPSADTDEQHAAADCPCAAPHAGPDSRPDAGTGAMP
DAVPNSMHEQSCSHPEEAQAGHPPADDSQAAGTAKKRGVFSSWRGKGARSTGAAAPQNAVAAGIKAAMTPPEPNAAQKFF
EAASRVGPFFLLLLLLAQAWPAFMGNALYCPREAESIFIFSQTSQNGLWLTPAAPGLAHWPVYHWYLAGMQSLVALAGPG
FGHLLFPMAALAGALLCLMSVWTLARVAGLGAQAALAGGMILLSAPLFVPMAHFTGPENLATALTLFSLALLCHGWQKPH
AWASLPAGFILAGLAGLTGGIFQLMLPLVASVFFLSWRGTFRRAQGMDGVTGFVLLLLLLACWLGGVMLWQQPEGYLKFL
GERLILWPWPSAQWWLPLLVAAAGLLPWAAIMACVSWVRVLRTAPADLAASRKERSGIAFLWISLAVACVLSLAAYDPAS
AALTIICLASPLLGKALLRLSGLGGRLFFIFAALCLLHAGMALAAAGFGPTLDWMGGFFKFSLSPEQREMVLGLKALPIL
GSICIVAAVLLSRMVRKGAHGGMGGALLICAVIVILLAQPGTMLLGPQLKAVPQAQLRHLEELLQPQAAPVPAIESPEAV
APAPEERAHEPATPETAVPQTHAAPADTASPVEKALEKAASEAAAYDARAAEEMEKCNAAPAQDAEDAATPGPVAVPGIA
EPSATEGAATEAAPDNAAQDEQAAAAGEDDAKVQGAQPEEPVAATPEAPAAPEAERANADNASAPEKEQSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82225; Mature: 82094

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQNSTLPEDGQPKRMDNADQHLSSGPGQETQAAATDREQETACPAPSADTDEQHAAADC
CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHCCCCCCCCCCCHHHHCCCC
PCAAPHAGPDSRPDAGTGAMPDAVPNSMHEQSCSHPEEAQAGHPPADDSQAAGTAKKRGV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCHHCCCHHHCCC
FSSWRGKGARSTGAAAPQNAVAAGIKAAMTPPEPNAAQKFFEAASRVGPFFLLLLLLAQA
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WPAFMGNALYCPREAESIFIFSQTSQNGLWLTPAAPGLAHWPVYHWYLAGMQSLVALAGP
HHHHHCCCEECCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GFGHLLFPMAALAGALLCLMSVWTLARVAGLGAQAALAGGMILLSAPLFVPMAHFTGPEN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHH
LATALTLFSLALLCHGWQKPHAWASLPAGFILAGLAGLTGGIFQLMLPLVASVFFLSWRG
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFRRAQGMDGVTGFVLLLLLLACWLGGVMLWQQPEGYLKFLGERLILWPWPSAQWWLPLL
HHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCEEEECCCCCHHHHHHH
VAAAGLLPWAAIMACVSWVRVLRTAPADLAASRKERSGIAFLWISLAVACVLSLAAYDPA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH
SAALTIICLASPLLGKALLRLSGLGGRLFFIFAALCLLHAGMALAAAGFGPTLDWMGGFF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCE
KFSLSPEQREMVLGLKALPILGSICIVAAVLLSRMVRKGAHGGMGGALLICAVIVILLAQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
PGTMLLGPQLKAVPQAQLRHLEELLQPQAAPVPAIESPEAVAPAPEERAHEPATPETAVP
CCCEEECCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
QTHAAPADTASPVEKALEKAASEAAAYDARAAEEMEKCNAAPAQDAEDAATPGPVAVPGI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC
AEPSATEGAATEAAPDNAAQDEQAAAAGEDDAKVQGAQPEEPVAATPEAPAAPEAERANA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
DNASAPEKEQSK
CCCCCCCHHCCC
>Mature Secondary Structure 
TQNSTLPEDGQPKRMDNADQHLSSGPGQETQAAATDREQETACPAPSADTDEQHAAADC
CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHCCCHHHCCCCCCCCCCCHHHHCCCC
PCAAPHAGPDSRPDAGTGAMPDAVPNSMHEQSCSHPEEAQAGHPPADDSQAAGTAKKRGV
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCHHCCCHHHCCC
FSSWRGKGARSTGAAAPQNAVAAGIKAAMTPPEPNAAQKFFEAASRVGPFFLLLLLLAQA
HHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
WPAFMGNALYCPREAESIFIFSQTSQNGLWLTPAAPGLAHWPVYHWYLAGMQSLVALAGP
HHHHHCCCEECCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GFGHLLFPMAALAGALLCLMSVWTLARVAGLGAQAALAGGMILLSAPLFVPMAHFTGPEN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHH
LATALTLFSLALLCHGWQKPHAWASLPAGFILAGLAGLTGGIFQLMLPLVASVFFLSWRG
HHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TFRRAQGMDGVTGFVLLLLLLACWLGGVMLWQQPEGYLKFLGERLILWPWPSAQWWLPLL
HHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCEEEECCCCCHHHHHHH
VAAAGLLPWAAIMACVSWVRVLRTAPADLAASRKERSGIAFLWISLAVACVLSLAAYDPA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCH
SAALTIICLASPLLGKALLRLSGLGGRLFFIFAALCLLHAGMALAAAGFGPTLDWMGGFF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCE
KFSLSPEQREMVLGLKALPILGSICIVAAVLLSRMVRKGAHGGMGGALLICAVIVILLAQ
EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
PGTMLLGPQLKAVPQAQLRHLEELLQPQAAPVPAIESPEAVAPAPEERAHEPATPETAVP
CCCEEECCCHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC
QTHAAPADTASPVEKALEKAASEAAAYDARAAEEMEKCNAAPAQDAEDAATPGPVAVPGI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCC
AEPSATEGAATEAAPDNAAQDEQAAAAGEDDAKVQGAQPEEPVAATPEAPAAPEAERANA
CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCC
DNASAPEKEQSK
CCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA