Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903825

Identifier: 220903825

GI number: 220903825

Start: 662227

End: 664437

Strand: Reverse

Name: 220903825

Synonym: Ddes_0549

Alternate gene names: NA

Gene position: 664437-662227 (Counterclockwise)

Preceding gene: 220903826

Following gene: 220903824

Centisome position: 23.12

GC content: 66.62

Gene sequence:

>2211_bases
GTGCTGCCTTCGGGCAGTCAGGCTGCGCCGCGCGCGGTTCGTAGCGCTCTGCCTCCGGGCGCACTGCTGCTTTTTTGCCT
GCTGCTGGCAGTTCTGCTTGGTGCGTGTACGCCGGGCCAGAAGATCGCCGCGCAAAAAACGGCAGATCAGAGCGTAACCC
CCCGGGCCGGAACGCATGCAAGTCCCCTGCCCCGGGCTGATCCGGGCTATCTGCAATGGCTTGAACGCCAGTCCATGCTG
GGTTCCACCCAGGACCTGACGGCGCAGGTGTCCGGCACAGGGCTTATCTGGCGCAACAGCGCCGCGGCCCGCCGGATTCC
CCTGCTGCTTTCCGCCGCTCCGTCCTGGCTGGATGTAAACCCGCACACCGTCACATCAGGGCAACCTTTCTGGAGGGCGC
TCGGCCTGTCCCCCCTGCCTGACATGCTCGGACAGGCGGGCCTGAACGGTTTTTTTGCAGCCCCCACAGGCGAAAGGGGT
GACATATGGGGCAGCTATAAAATGCTTACCCCCGGCGGGGGCAACGTGACCGCCCTGCGTTTTGACACAGCCCTGGGCAG
TGAGGAAGATTTTGACAGGGCCGCAGGCCGCCTGGAAAATATCGGACTCCAGCTGGGCGGCGAACTGCCGCCCTCGGCCA
CGGGTCTTGGGCCTGATTTTATTTTACAGGCGCGGCACGCCTCGCGTTTTGACGGTCTCTATGCCATGATGGCCGTGCCG
CAAAAAGACTGGGATGTCCTGCCTGTCACCGCCGACGAATGGGACTGCCTGCCCCTGCGCCCGCAAGCCGTGCAGGCACT
GGCCCAGCGCGGCATTTTACCAGAACGTCTCGTGCGTGACGGCATGACCTGGACCACGCCCGGCGGCTGGGCGGTCACGG
GTGAAGTTCGCGGTGCGGACGGGCAGGCGCGGCGGTGGGTTTACCGCTACAGCGGGCATCCCCTGCGCCCAGTACTGCTG
TGGCAGGACCCCTCCGGTCAGGCACGACGTATATTTTCCGCAGCAGTCATCCGCCATACGGGGCTGCAGCAGCAGACCCT
GGCCGGATTGCGCATGGAGGCCCTTATGGGGCTGGATGTTCCGCCATCCGGCGATGCGGCGCCTGCCGCCCGAAGCCCTG
CCTCGCCCCGGCGGACGGCCCCGGCCCGGCACAATGCGCCGGGCAGTACGGCGAACGCGCAACGACTGATGGAACTGACG
CCCGGCCTGGAAGCACTGGACGCCCTGTCGGGCGAAATCCACCGCTACGGCGGATGGGCCATGCAGGACGATGCCCTGCC
GCCCTCCCTGACGCGGGCGGTGCTGGATACGTCTGTGGATTTTACACGCGACACCATTACGGAACCGGCGGCGGCCTATG
CGCTGCTGAGCGGCGATGCCGCCCCCCTTGCCGGACTTTTGCGGGCATCGCTGGCCGAAGGCGTGGACCACAGCCGTCTG
GCCCGTGGACAGAAAGACAGGCAGAGCGTGGACTGGCGGCCCCTGCTGCCCCTGCCCGAAGGGCGGAACATGGCGCGCCG
CGCGCAGGAGCAGGCCCAGGCCCCTGCCGATGCCACAGAATTGTGGACCACGCAGGCCGGCCTTGCGGCGCTGGCTCTGG
GGCTGGATACGGCAGCAGTGCGGCCGGAGCAGGCGAAAACACTGCGGCAGGCTGTACTGTTGCTGCTTTCCTTCCGCGTG
GGATTGCCCGGCCTTGCTTTTATAAGCCCGCAGGATATGACCGGAGCGCTCAATCTGGCACGTCCCCCGGCGGGTCTGCC
CGCCAGTATGGGCAGTGTTCCCCTGTGGGACGAACAGACAGGGTACGCCGGCAGCATACCGCCGCTGCCGCTGGCTTTCG
GCTCTCTGGACAGACAGTGGGCCGACAGGCAGAGTTTTCTTCATGAACTGGCGGCTCTTTTACGCGCCCGTCGCGATGCC
GGCCTGGCTGGCGGCCGGGTAACAGAAATCTTTTCAGGGCCGCCGGGCTGTATCGGCGTGCTGAGCACCCTGCCCGGCGG
CGGTTACTGGCTGCTGGCCGCCAACTTTTCCGGCAAGCGGCAGCGTCTGGCCTGCGCACTGCCCGCAGCGGCCCGCGCGG
CACACGAAGTACCATCCGGCCCAAACCTGCCCGTGCAAGGGCGCACTGTGGAACTTGACCTAGACTCCCGCCAGTCCCGG
CATATTCTGCTCACGGGGCAGGCGGCAACACCTGAAGGAGCGAACCCATGA

Upstream 100 bases:

>100_bases
CCCGGTCCTGAGCCGGTACGCTGCAGCACCCGCCGAAAACGGCGCGGCATGCCGCCCTGTGGCGGCAGCCTGCCGTGCCG
CGCAAGATACGGGGTCTCGT

Downstream 100 bases:

>100_bases
CCCAGAACTCCACCCTGCCCGAGGACGGCCAGCCCAAGCGCATGGACAATGCCGACCAGCACCTTTCTTCCGGGCCGGGG
CAGGAAACTCAGGCAGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosidase; PE-PGRS Family Protein

Number of amino acids: Translated: 736; Mature: 736

Protein sequence:

>736_residues
MLPSGSQAAPRAVRSALPPGALLLFCLLLAVLLGACTPGQKIAAQKTADQSVTPRAGTHASPLPRADPGYLQWLERQSML
GSTQDLTAQVSGTGLIWRNSAAARRIPLLLSAAPSWLDVNPHTVTSGQPFWRALGLSPLPDMLGQAGLNGFFAAPTGERG
DIWGSYKMLTPGGGNVTALRFDTALGSEEDFDRAAGRLENIGLQLGGELPPSATGLGPDFILQARHASRFDGLYAMMAVP
QKDWDVLPVTADEWDCLPLRPQAVQALAQRGILPERLVRDGMTWTTPGGWAVTGEVRGADGQARRWVYRYSGHPLRPVLL
WQDPSGQARRIFSAAVIRHTGLQQQTLAGLRMEALMGLDVPPSGDAAPAARSPASPRRTAPARHNAPGSTANAQRLMELT
PGLEALDALSGEIHRYGGWAMQDDALPPSLTRAVLDTSVDFTRDTITEPAAAYALLSGDAAPLAGLLRASLAEGVDHSRL
ARGQKDRQSVDWRPLLPLPEGRNMARRAQEQAQAPADATELWTTQAGLAALALGLDTAAVRPEQAKTLRQAVLLLLSFRV
GLPGLAFISPQDMTGALNLARPPAGLPASMGSVPLWDEQTGYAGSIPPLPLAFGSLDRQWADRQSFLHELAALLRARRDA
GLAGGRVTEIFSGPPGCIGVLSTLPGGGYWLLAANFSGKRQRLACALPAAARAAHEVPSGPNLPVQGRTVELDLDSRQSR
HILLTGQAATPEGANP

Sequences:

>Translated_736_residues
MLPSGSQAAPRAVRSALPPGALLLFCLLLAVLLGACTPGQKIAAQKTADQSVTPRAGTHASPLPRADPGYLQWLERQSML
GSTQDLTAQVSGTGLIWRNSAAARRIPLLLSAAPSWLDVNPHTVTSGQPFWRALGLSPLPDMLGQAGLNGFFAAPTGERG
DIWGSYKMLTPGGGNVTALRFDTALGSEEDFDRAAGRLENIGLQLGGELPPSATGLGPDFILQARHASRFDGLYAMMAVP
QKDWDVLPVTADEWDCLPLRPQAVQALAQRGILPERLVRDGMTWTTPGGWAVTGEVRGADGQARRWVYRYSGHPLRPVLL
WQDPSGQARRIFSAAVIRHTGLQQQTLAGLRMEALMGLDVPPSGDAAPAARSPASPRRTAPARHNAPGSTANAQRLMELT
PGLEALDALSGEIHRYGGWAMQDDALPPSLTRAVLDTSVDFTRDTITEPAAAYALLSGDAAPLAGLLRASLAEGVDHSRL
ARGQKDRQSVDWRPLLPLPEGRNMARRAQEQAQAPADATELWTTQAGLAALALGLDTAAVRPEQAKTLRQAVLLLLSFRV
GLPGLAFISPQDMTGALNLARPPAGLPASMGSVPLWDEQTGYAGSIPPLPLAFGSLDRQWADRQSFLHELAALLRARRDA
GLAGGRVTEIFSGPPGCIGVLSTLPGGGYWLLAANFSGKRQRLACALPAAARAAHEVPSGPNLPVQGRTVELDLDSRQSR
HILLTGQAATPEGANP
>Mature_736_residues
MLPSGSQAAPRAVRSALPPGALLLFCLLLAVLLGACTPGQKIAAQKTADQSVTPRAGTHASPLPRADPGYLQWLERQSML
GSTQDLTAQVSGTGLIWRNSAAARRIPLLLSAAPSWLDVNPHTVTSGQPFWRALGLSPLPDMLGQAGLNGFFAAPTGERG
DIWGSYKMLTPGGGNVTALRFDTALGSEEDFDRAAGRLENIGLQLGGELPPSATGLGPDFILQARHASRFDGLYAMMAVP
QKDWDVLPVTADEWDCLPLRPQAVQALAQRGILPERLVRDGMTWTTPGGWAVTGEVRGADGQARRWVYRYSGHPLRPVLL
WQDPSGQARRIFSAAVIRHTGLQQQTLAGLRMEALMGLDVPPSGDAAPAARSPASPRRTAPARHNAPGSTANAQRLMELT
PGLEALDALSGEIHRYGGWAMQDDALPPSLTRAVLDTSVDFTRDTITEPAAAYALLSGDAAPLAGLLRASLAEGVDHSRL
ARGQKDRQSVDWRPLLPLPEGRNMARRAQEQAQAPADATELWTTQAGLAALALGLDTAAVRPEQAKTLRQAVLLLLSFRV
GLPGLAFISPQDMTGALNLARPPAGLPASMGSVPLWDEQTGYAGSIPPLPLAFGSLDRQWADRQSFLHELAALLRARRDA
GLAGGRVTEIFSGPPGCIGVLSTLPGGGYWLLAANFSGKRQRLACALPAAARAAHEVPSGPNLPVQGRTVELDLDSRQSR
HILLTGQAATPEGANP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77922; Mature: 77922

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPSGSQAAPRAVRSALPPGALLLFCLLLAVLLGACTPGQKIAAQKTADQSVTPRAGTHA
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC
SPLPRADPGYLQWLERQSMLGSTQDLTAQVSGTGLIWRNSAAARRIPLLLSAAPSWLDVN
CCCCCCCCHHHHHHHHHHHCCCCHHCEEEECCCEEEEECCCCHHHCCCCEECCCCEEECC
PHTVTSGQPFWRALGLSPLPDMLGQAGLNGFFAAPTGERGDIWGSYKMLTPGGGNVTALR
CCEECCCCHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEE
FDTALGSEEDFDRAAGRLENIGLQLGGELPPSATGLGPDFILQARHASRFDGLYAMMAVP
EECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHCCHHHHHHCCEEEEEECC
QKDWDVLPVTADEWDCLPLRPQAVQALAQRGILPERLVRDGMTWTTPGGWAVTGEVRGAD
CCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEECCCCEEEEEEEECCC
GQARRWVYRYSGHPLRPVLLWQDPSGQARRIFSAAVIRHTGLQQQTLAGLRMEALMGLDV
CCHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PPSGDAAPAARSPASPRRTAPARHNAPGSTANAQRLMELTPGLEALDALSGEIHRYGGWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHCCCCE
MQDDALPPSLTRAVLDTSVDFTRDTITEPAAAYALLSGDAAPLAGLLRASLAEGVDHSRL
ECCCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
ARGQKDRQSVDWRPLLPLPEGRNMARRAQEQAQAPADATELWTTQAGLAALALGLDTAAV
HCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHC
RPEQAKTLRQAVLLLLSFRVGLPGLAFISPQDMTGALNLARPPAGLPASMGSVPLWDEQT
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
GYAGSIPPLPLAFGSLDRQWADRQSFLHELAALLRARRDAGLAGGRVTEIFSGPPGCIGV
CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHH
LSTLPGGGYWLLAANFSGKRQRLACALPAAARAAHEVPSGPNLPVQGRTVELDLDSRQSR
HHHCCCCCEEEEEECCCCCCHHEEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
HILLTGQAATPEGANP
EEEEECCCCCCCCCCC
>Mature Secondary Structure
MLPSGSQAAPRAVRSALPPGALLLFCLLLAVLLGACTPGQKIAAQKTADQSVTPRAGTHA
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCC
SPLPRADPGYLQWLERQSMLGSTQDLTAQVSGTGLIWRNSAAARRIPLLLSAAPSWLDVN
CCCCCCCCHHHHHHHHHHHCCCCHHCEEEECCCEEEEECCCCHHHCCCCEECCCCEEECC
PHTVTSGQPFWRALGLSPLPDMLGQAGLNGFFAAPTGERGDIWGSYKMLTPGGGNVTALR
CCEECCCCHHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCEEEECCCCCCEEEEE
FDTALGSEEDFDRAAGRLENIGLQLGGELPPSATGLGPDFILQARHASRFDGLYAMMAVP
EECCCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCCHHHHHCCHHHHHHCCEEEEEECC
QKDWDVLPVTADEWDCLPLRPQAVQALAQRGILPERLVRDGMTWTTPGGWAVTGEVRGAD
CCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCEEECCCCEEEEEEEECCC
GQARRWVYRYSGHPLRPVLLWQDPSGQARRIFSAAVIRHTGLQQQTLAGLRMEALMGLDV
CCHHEEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
PPSGDAAPAARSPASPRRTAPARHNAPGSTANAQRLMELTPGLEALDALSGEIHRYGGWA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCHHHHCCCCE
MQDDALPPSLTRAVLDTSVDFTRDTITEPAAAYALLSGDAAPLAGLLRASLAEGVDHSRL
ECCCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH
ARGQKDRQSVDWRPLLPLPEGRNMARRAQEQAQAPADATELWTTQAGLAALALGLDTAAV
HCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHC
RPEQAKTLRQAVLLLLSFRVGLPGLAFISPQDMTGALNLARPPAGLPASMGSVPLWDEQT
CCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC
GYAGSIPPLPLAFGSLDRQWADRQSFLHELAALLRARRDAGLAGGRVTEIFSGPPGCIGV
CCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHH
LSTLPGGGYWLLAANFSGKRQRLACALPAAARAAHEVPSGPNLPVQGRTVELDLDSRQSR
HHHCCCCCEEEEEECCCCCCHHEEECCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
HILLTGQAATPEGANP
EEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA