Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903584

Identifier: 220903584

GI number: 220903584

Start: 369381

End: 370100

Strand: Reverse

Name: 220903584

Synonym: Ddes_0303

Alternate gene names: NA

Gene position: 370100-369381 (Counterclockwise)

Preceding gene: 220903597

Following gene: 220903583

Centisome position: 12.88

GC content: 66.81

Gene sequence:

>720_bases
ATGCGCATATGTCCAATACCATATCGCCTTGTAGCGGCAATCTGCCTGACGATGCTCTGCCTGCTGGCTGCGGGCTGCTC
GGCGCGCCATAATACCGGCCCGGATGCGCCCGGCAGTTCGGATTTTCCGCCCGGCTCGCCTGCTGACCCGCGCTCCAACC
AGGCCGAAGCCAGGCCCGGACCGTTGCCCCCCATCAAGGCAAACCCCGGGCAAAGCGTCTTTGTGGACGTGAGCGGCGGC
AGCGCCACATTTAACGCCGACCTTCAGTCGATGCTGACGGCTTACCTGCAAAGTGAGCGGGAGCTTGTACCCGCGGATTC
GGCCAAGGGGTCTGACCTGCTGCTGCGTGTCGCGGTGGACGAGGTAGTCCCCCTGGGTTCGCGCAGTACACCGCCCGATG
CGGGCAGAGCCTTGGGGCATACCGCTACCGGCGCCATGCTGGGTGCGCTCGTGGGCGGCGCTACCGGCGGCGGCCGCGGC
GCGGCCTGGGGCGTTGGCGGCGGCCTGTTGCTGGGCCTTGGCGTCAGCATGCTTGACGGCGGCACAAGCAACATCTGGGG
CATGCGCGCCCGCGTGGGCGCAGGCCGTAACGGCAAGCAGCCCCAGGAGATGTATACGGTAAGCGTCAGCGCCGAAGGCG
CCGGCATGGGGCGCGACGATATTCTTCCCGCCCTGGAGGACAAGCTGAGCAGTGAAATCGTCAAGGCCGTAAAGCCCTGA

Upstream 100 bases:

>100_bases
ACATCAATTCCACAAGCATGGCAGCATGACATACCCAACTGGACAGGGGTGCGTCACTTGCGGTAGTATAGTAGTAATTT
CCAGTCAAAATGAGGGATAT

Downstream 100 bases:

>100_bases
CAAGCCCGCCGCCCTGTCAGGATGCCGCAGCGGACAGTCCTTTTGCTTCAGTTACAGCCCCAAGCCTGCCGGTTCCCCCT
TGCCGGACGAGAAAAGACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRICPIPYRLVAAICLTMLCLLAAGCSARHNTGPDAPGSSDFPPGSPADPRSNQAEARPGPLPPIKANPGQSVFVDVSGG
SATFNADLQSMLTAYLQSERELVPADSAKGSDLLLRVAVDEVVPLGSRSTPPDAGRALGHTATGAMLGALVGGATGGGRG
AAWGVGGGLLLGLGVSMLDGGTSNIWGMRARVGAGRNGKQPQEMYTVSVSAEGAGMGRDDILPALEDKLSSEIVKAVKP

Sequences:

>Translated_239_residues
MRICPIPYRLVAAICLTMLCLLAAGCSARHNTGPDAPGSSDFPPGSPADPRSNQAEARPGPLPPIKANPGQSVFVDVSGG
SATFNADLQSMLTAYLQSERELVPADSAKGSDLLLRVAVDEVVPLGSRSTPPDAGRALGHTATGAMLGALVGGATGGGRG
AAWGVGGGLLLGLGVSMLDGGTSNIWGMRARVGAGRNGKQPQEMYTVSVSAEGAGMGRDDILPALEDKLSSEIVKAVKP
>Mature_239_residues
MRICPIPYRLVAAICLTMLCLLAAGCSARHNTGPDAPGSSDFPPGSPADPRSNQAEARPGPLPPIKANPGQSVFVDVSGG
SATFNADLQSMLTAYLQSERELVPADSAKGSDLLLRVAVDEVVPLGSRSTPPDAGRALGHTATGAMLGALVGGATGGGRG
AAWGVGGGLLLGLGVSMLDGGTSNIWGMRARVGAGRNGKQPQEMYTVSVSAEGAGMGRDDILPALEDKLSSEIVKAVKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24127; Mature: 24127

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRICPIPYRLVAAICLTMLCLLAAGCSARHNTGPDAPGSSDFPPGSPADPRSNQAEARPG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLPPIKANPGQSVFVDVSGGSATFNADLQSMLTAYLQSERELVPADSAKGSDLLLRVAVD
CCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
EVVPLGSRSTPPDAGRALGHTATGAMLGALVGGATGGGRGAAWGVGGGLLLGLGVSMLDG
HHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
GTSNIWGMRARVGAGRNGKQPQEMYTVSVSAEGAGMGRDDILPALEDKLSSEIVKAVKP
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRICPIPYRLVAAICLTMLCLLAAGCSARHNTGPDAPGSSDFPPGSPADPRSNQAEARPG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PLPPIKANPGQSVFVDVSGGSATFNADLQSMLTAYLQSERELVPADSAKGSDLLLRVAVD
CCCCCCCCCCCEEEEEECCCCEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEHH
EVVPLGSRSTPPDAGRALGHTATGAMLGALVGGATGGGRGAAWGVGGGLLLGLGVSMLDG
HHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC
GTSNIWGMRARVGAGRNGKQPQEMYTVSVSAEGAGMGRDDILPALEDKLSSEIVKAVKP
CCCCCCCHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA