| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903597
Identifier: 220903597
GI number: 220903597
Start: 387637
End: 388791
Strand: Reverse
Name: 220903597
Synonym: Ddes_0316
Alternate gene names: NA
Gene position: 388791-387637 (Counterclockwise)
Preceding gene: 220903598
Following gene: 220903584
Centisome position: 13.53
GC content: 58.79
Gene sequence:
>1155_bases ATGAAAACAGTGGACAGGCCTCCTCTTCTGTCCTCGGCGGAAAAGAATGCTCCATACACATTAGCGCTCAAACCACCGGC ACTTCGGGTACCGCCTAATGAAATCAATCTGGGCGGCGGCAGCAATATCCTCACCACCAACGGGCTGGTGCAGCCCGGCA GCCTGAATGTCCTTGCTACTGGCGGAACCTACACCTTGATACTGCAAGCCGCTGACACACAAGGCTTTATCGCGCAGTAT GGTGGATGGCTCGATGCCATCCGCGCCAGCGTCCTTTTTTCCGGTGGCCTGGAGGCCATCAATTTTGAAGGGCTGGACGG CTCGGATCTGGCTGATTTCCTGGATGTGCTTAATGACGTTCTCTGGGACCTGAAGGATAACAGCGTCGATATTCAGCCTC CGGATCTTGCCGACGCGTTGCACGACCCCGCTGGGAGTCCTATCGCGCCCACTGTCGCGCCTTTGGCCGCAACGCTTGCG GAAACCGATGCGGGGCATCACACGCAGGATACGCAGCATGCCGCCGGGCATGATGCCGCGCAGGACTCGGCGCAGGATGC AACGTTGGCTACCCACGATGGCCCGACGCTCCTGACGGACGATGGCCTGAATACCGCTTTCAATGCACCGACGGACAATG CCGGAACGCATACGGATGTGCCTGGGCCTGACGCCACAGCCTTGGCGCACTTCAGTGAAGACGCCGAAGAACAGGTTCAG CCGCTTTTCGCCTTTCTGGACGGCCATACCACAGATACGTCCGCAAGCATGCCCCTTGAAGGGGGAGATGACGCCCTGCA TAACGGCTATCTTGGCAATGAAGGAGAAAACAGCGGGAATTCTGCCGGGCTTCATGCCCCCATCACCCTAACATACGGCG ATGAAAGTCTCGACAGCCTGTTCACAGCCGCCGGCGAACAAAACACAGAACTGGCCGGAACAGGCCTTGAAAGTGATGCA TTGCATGACATGGGCCTGACGGACATGAGTACGGCTCTTGACCAGAATCCCCTCGCCGGGCCTGAGGCAGCCAGTGGCCC TGCTGCCGCCGGTGGTCTTGCTGCCGCTGCCAGCGAAGTCAGCGATATTCCCAGCGTTATGGATTCCTGCCAGGAAGCCA CGGATAGCGCCGCAAGAGAAATGACAACCTGCTAG
Upstream 100 bases:
>100_bases GGCGTATGGAATTCAGATATTGACATCACGGCTTCCGCAACGGGAGCAGTCAATATCACAGCCCGGCACAATACCGGGAA TGCCTACGGACTTGCCACAT
Downstream 100 bases:
>100_bases GCAAGTAACTGCAAAGGCTGTTCACTCTTTTCCTGATCCATCACGCCGCCGCGGCAACAGGTCAGGCAATAAAAAGAGTG AACAGCCATAAAAACACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MKTVDRPPLLSSAEKNAPYTLALKPPALRVPPNEINLGGGSNILTTNGLVQPGSLNVLATGGTYTLILQAADTQGFIAQY GGWLDAIRASVLFSGGLEAINFEGLDGSDLADFLDVLNDVLWDLKDNSVDIQPPDLADALHDPAGSPIAPTVAPLAATLA ETDAGHHTQDTQHAAGHDAAQDSAQDATLATHDGPTLLTDDGLNTAFNAPTDNAGTHTDVPGPDATALAHFSEDAEEQVQ PLFAFLDGHTTDTSASMPLEGGDDALHNGYLGNEGENSGNSAGLHAPITLTYGDESLDSLFTAAGEQNTELAGTGLESDA LHDMGLTDMSTALDQNPLAGPEAASGPAAAGGLAAAASEVSDIPSVMDSCQEATDSAAREMTTC
Sequences:
>Translated_384_residues MKTVDRPPLLSSAEKNAPYTLALKPPALRVPPNEINLGGGSNILTTNGLVQPGSLNVLATGGTYTLILQAADTQGFIAQY GGWLDAIRASVLFSGGLEAINFEGLDGSDLADFLDVLNDVLWDLKDNSVDIQPPDLADALHDPAGSPIAPTVAPLAATLA ETDAGHHTQDTQHAAGHDAAQDSAQDATLATHDGPTLLTDDGLNTAFNAPTDNAGTHTDVPGPDATALAHFSEDAEEQVQ PLFAFLDGHTTDTSASMPLEGGDDALHNGYLGNEGENSGNSAGLHAPITLTYGDESLDSLFTAAGEQNTELAGTGLESDA LHDMGLTDMSTALDQNPLAGPEAASGPAAAGGLAAAASEVSDIPSVMDSCQEATDSAAREMTTC >Mature_384_residues MKTVDRPPLLSSAEKNAPYTLALKPPALRVPPNEINLGGGSNILTTNGLVQPGSLNVLATGGTYTLILQAADTQGFIAQY GGWLDAIRASVLFSGGLEAINFEGLDGSDLADFLDVLNDVLWDLKDNSVDIQPPDLADALHDPAGSPIAPTVAPLAATLA ETDAGHHTQDTQHAAGHDAAQDSAQDATLATHDGPTLLTDDGLNTAFNAPTDNAGTHTDVPGPDATALAHFSEDAEEQVQ PLFAFLDGHTTDTSASMPLEGGDDALHNGYLGNEGENSGNSAGLHAPITLTYGDESLDSLFTAAGEQNTELAGTGLESDA LHDMGLTDMSTALDQNPLAGPEAASGPAAAGGLAAAASEVSDIPSVMDSCQEATDSAAREMTTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39157; Mature: 39157
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVDRPPLLSSAEKNAPYTLALKPPALRVPPNEINLGGGSNILTTNGLVQPGSLNVLAT CCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEECCCCCCEEECCCEECCCCEEEEEE GGTYTLILQAADTQGFIAQYGGWLDAIRASVLFSGGLEAINFEGLDGSDLADFLDVLNDV CCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH LWDLKDNSVDIQPPDLADALHDPAGSPIAPTVAPLAATLAETDAGHHTQDTQHAAGHDAA HHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHH QDSAQDATLATHDGPTLLTDDGLNTAFNAPTDNAGTHTDVPGPDATALAHFSEDAEEQVQ HCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PLFAFLDGHTTDTSASMPLEGGDDALHNGYLGNEGENSGNSAGLHAPITLTYGDESLDSL HHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHH FTAAGEQNTELAGTGLESDALHDMGLTDMSTALDQNPLAGPEAASGPAAAGGLAAAASEV HHHCCCCCCEEECCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SDIPSVMDSCQEATDSAAREMTTC HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTVDRPPLLSSAEKNAPYTLALKPPALRVPPNEINLGGGSNILTTNGLVQPGSLNVLAT CCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCEECCCCCCEEECCCEECCCCEEEEEE GGTYTLILQAADTQGFIAQYGGWLDAIRASVLFSGGLEAINFEGLDGSDLADFLDVLNDV CCEEEEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHH LWDLKDNSVDIQPPDLADALHDPAGSPIAPTVAPLAATLAETDAGHHTQDTQHAAGHDAA HHHCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHCCCCHH QDSAQDATLATHDGPTLLTDDGLNTAFNAPTDNAGTHTDVPGPDATALAHFSEDAEEQVQ HCCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH PLFAFLDGHTTDTSASMPLEGGDDALHNGYLGNEGENSGNSAGLHAPITLTYGDESLDSL HHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEEEECCHHHHHH FTAAGEQNTELAGTGLESDALHDMGLTDMSTALDQNPLAGPEAASGPAAAGGLAAAASEV HHHCCCCCCEEECCCCCCHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH SDIPSVMDSCQEATDSAAREMTTC HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA