| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903583
Identifier: 220903583
GI number: 220903583
Start: 368280
End: 368936
Strand: Reverse
Name: 220903583
Synonym: Ddes_0302
Alternate gene names: NA
Gene position: 368936-368280 (Counterclockwise)
Preceding gene: 220903584
Following gene: 220903579
Centisome position: 12.84
GC content: 59.82
Gene sequence:
>657_bases ATGACTTTGAAAGGACTACGTTTTATTGCACTGCTGCTTTGCCTGAGCCTTGTGCCGCTTGCGGCCTGCGTGCGTCAGGC CGCTGACCCGGACAAGCTGGAAGTATTGCGTTCGGGCAAGCTGCAGGAAGCACAAGATGATGATACAATTGCGGATACTG TCTATGTAAGCGTGCGCGACAACACCAACCGTGTTTTCGGTCTGCGCGCGCAGACAGAATCCTGGCTGCAGCGCAGCGGA TTCACCATTGTGGGCAACCCCAGCGAGGCCGGATATATTGTACAGCTTACGGTGCTGTCTGCCGGAAATACAGATCCGGC ACATCTGCGGCAGATGGTTGACGCAGGCTACGACACGCCTTCCGCGCTCAAGGGCAGCGGCGGCGCTACGGTCATGGCCG ACGTGCTGCTGGTGCAGCGCCGCGTTCCCAGCGCCCAAAGGCCAAGCAGGGCCAAACTCAAGAACATCTCCAGCCGTAAT GCCCTTTCCAACAGCCAGATGCGCATAGCCGTGCTGTTGCCCGGGCAGGTACGCATGGATGCCGGAGCACCCACCCTGTT TACAGAAACTCTGGCCCGCGAAATCGGAACCGCCATCCACGCGGCCAACAAAAACGCTGACCAGGCCGCCCCCGCCGGAA CCGGAGCAGCACAATAG
Upstream 100 bases:
>100_bases GCCCGAAAAATGCATCCGCCGGGAACATGCATGGCGAAAGCCCTACGCTTTCGCATTCAATACCAGCCGCGCCTCTGGCG GCAAGGACCGAGGTTTTCTT
Downstream 100 bases:
>100_bases GCCACGCTTCGGGGGCAGATGCGGCTGCAAGCCCGCACGACCGAACAGCGATCAGACATACAGCCTGTGGCTGCCGCCGA AATGGGCACCCCTGCGGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTLKGLRFIALLLCLSLVPLAACVRQAADPDKLEVLRSGKLQEAQDDDTIADTVYVSVRDNTNRVFGLRAQTESWLQRSG FTIVGNPSEAGYIVQLTVLSAGNTDPAHLRQMVDAGYDTPSALKGSGGATVMADVLLVQRRVPSAQRPSRAKLKNISSRN ALSNSQMRIAVLLPGQVRMDAGAPTLFTETLAREIGTAIHAANKNADQAAPAGTGAAQ
Sequences:
>Translated_218_residues MTLKGLRFIALLLCLSLVPLAACVRQAADPDKLEVLRSGKLQEAQDDDTIADTVYVSVRDNTNRVFGLRAQTESWLQRSG FTIVGNPSEAGYIVQLTVLSAGNTDPAHLRQMVDAGYDTPSALKGSGGATVMADVLLVQRRVPSAQRPSRAKLKNISSRN ALSNSQMRIAVLLPGQVRMDAGAPTLFTETLAREIGTAIHAANKNADQAAPAGTGAAQ >Mature_217_residues TLKGLRFIALLLCLSLVPLAACVRQAADPDKLEVLRSGKLQEAQDDDTIADTVYVSVRDNTNRVFGLRAQTESWLQRSGF TIVGNPSEAGYIVQLTVLSAGNTDPAHLRQMVDAGYDTPSALKGSGGATVMADVLLVQRRVPSAQRPSRAKLKNISSRNA LSNSQMRIAVLLPGQVRMDAGAPTLFTETLAREIGTAIHAANKNADQAAPAGTGAAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23109; Mature: 22977
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKGLRFIALLLCLSLVPLAACVRQAADPDKLEVLRSGKLQEAQDDDTIADTVYVSVRD CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEC NTNRVFGLRAQTESWLQRSGFTIVGNPSEAGYIVQLTVLSAGNTDPAHLRQMVDAGYDTP CCCEEEEEEHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCC SALKGSGGATVMADVLLVQRRVPSAQRPSRAKLKNISSRNALSNSQMRIAVLLPGQVRMD CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHCCCCCCCEEEEEEECCCEEEC AGAPTLFTETLAREIGTAIHAANKNADQAAPAGTGAAQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure TLKGLRFIALLLCLSLVPLAACVRQAADPDKLEVLRSGKLQEAQDDDTIADTVYVSVRD CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEEEEEEC NTNRVFGLRAQTESWLQRSGFTIVGNPSEAGYIVQLTVLSAGNTDPAHLRQMVDAGYDTP CCCEEEEEEHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCC SALKGSGGATVMADVLLVQRRVPSAQRPSRAKLKNISSRNALSNSQMRIAVLLPGQVRMD CCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCHHHCCCCCCCEEEEEEECCCEEEC AGAPTLFTETLAREIGTAIHAANKNADQAAPAGTGAAQ CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA