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The map label for this gene is pqqE [H]

Identifier: 220903568

GI number: 220903568

Start: 341987

End: 343231

Strand: Reverse

Name: pqqE [H]

Synonym: Ddes_0287

Alternate gene names: 220903568

Gene position: 343231-341987 (Counterclockwise)

Preceding gene: 220903569

Following gene: 220903567

Centisome position: 11.94

GC content: 61.93

Gene sequence:

>1245_bases
ATGAGCAAGCACATGCACCACGCCGGAGGGCACCCGGGCGGTATGCCCGGCAGCGCGGGCAACCCCATAAGCGGTCATCC
CGGCCAGGCAGAAGACGGCAAGCACCGCGGGCATCCGGGCGGGCACGGCATGAGCGCGCCCCTGCGCACCCTTGAAGACG
GCAGCCCCGCCTGCCGCCTCATCGCCTGGGAAGTCACGCGCTCCTGTAACCTGGCCTGCAAGCACTGCCGCGCCGAGGCC
CACCCCGAACCGTACCCCGGTGAGCTGTCCACAGCCGAAGCCAAGGCCCTGATCGACACCTTCACCGAGGTGGGCAAGCC
CATCATCATCTTCACCGGTGGCGATCCCATGATACGGCCCGATGTGTATGAGCTGGTGGCCTACGCCCACAGCAAGGGGC
TGCCCTGCGCCTTTTCGCCCAACGGCACCCTTATCACGCCGGAAACCGCGCAAAAAATCAAAAACGCGGGCGTCAACCGC
TGCTCCATCTCCATTGATGGAGCAGATGCCGCCAGCCACGACAGCTTCCGCGGTGTTCCCGGCGCGTTTGAAGCGTCCAT
GCGCGGCATCGAATACCTCAAGGCCGCGGGCGTGCCGTTTCAGATCAATACCACGGTCACACGCAACAACCTCACAAGTT
TTAAAAAGATATTTGAGCTGTGTGAGCGTATCGGCGCGGCAGCCTGGCACATCTTTCTTCTGGTGCCCATGGGCCGGGCC
GCGGGCCTGGCCGATCAGGTGATCACGGCCCAGGAATACGAAGACGTGCTCCACTGGCTGTACGACTTCCGCAAAACCAC
CAAAATGCACCTCAAGGCTACCTGTGCACCGCACTATTACCGCATCATGCGCCAGCGGGCCAAAGAAGAAGGCGTGAGCG
TCACCCCCGAAAACTTCGGCATGGATGCCCTCACACGAGGCTGCCTCGGCGGCACGGGCTTCTGCTTTATCAGCCATGTT
GGGCAGGTGCAGCCTTGCGGATATCTGGAACTTGATTGCGGCAATGTACGCCAAACGCCCTTTCCCAAAATCTGGCGCGA
AAGCAAGCATTTCTTGCAGTTCCGCGACCAGTCCTGCTATTCGGGCAAATGCGGCGAGTGCGAGTATCACAAGGTCTGCG
GCGGCTGCCGCGCCCGCGCCCACAGCATGGACGGCGATCATATGGGCGAGGAACCGCTGTGCACCTATATTCCGGCCAAA
ATGCGCAAAAAGGGCCGGGACGGCAAGTCCGGGGAGGAAAAATAA

Upstream 100 bases:

>100_bases
ATCCCTCATGGGGCTGAAGCGTGCCGGGGCGGACATGATCATCACCTACTTTACAGAAACCCTGCTGCGCGAAAAGCTGG
CAAGGTAGGGCGGAAGCATA

Downstream 100 bases:

>100_bases
TGACCACGCAAACATCTGCCGCCACCGGCAGCCCCACACAGCAAAATAACGCCGCCCTTGCCGACATGGACAGTATGGAC
AGGCAACTGCTGGACATCAT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSKHMHHAGGHPGGMPGSAGNPISGHPGQAEDGKHRGHPGGHGMSAPLRTLEDGSPACRLIAWEVTRSCNLACKHCRAEA
HPEPYPGELSTAEAKALIDTFTEVGKPIIIFTGGDPMIRPDVYELVAYAHSKGLPCAFSPNGTLITPETAQKIKNAGVNR
CSISIDGADAASHDSFRGVPGAFEASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCERIGAAAWHIFLLVPMGRA
AGLADQVITAQEYEDVLHWLYDFRKTTKMHLKATCAPHYYRIMRQRAKEEGVSVTPENFGMDALTRGCLGGTGFCFISHV
GQVQPCGYLELDCGNVRQTPFPKIWRESKHFLQFRDQSCYSGKCGECEYHKVCGGCRARAHSMDGDHMGEEPLCTYIPAK
MRKKGRDGKSGEEK

Sequences:

>Translated_414_residues
MSKHMHHAGGHPGGMPGSAGNPISGHPGQAEDGKHRGHPGGHGMSAPLRTLEDGSPACRLIAWEVTRSCNLACKHCRAEA
HPEPYPGELSTAEAKALIDTFTEVGKPIIIFTGGDPMIRPDVYELVAYAHSKGLPCAFSPNGTLITPETAQKIKNAGVNR
CSISIDGADAASHDSFRGVPGAFEASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCERIGAAAWHIFLLVPMGRA
AGLADQVITAQEYEDVLHWLYDFRKTTKMHLKATCAPHYYRIMRQRAKEEGVSVTPENFGMDALTRGCLGGTGFCFISHV
GQVQPCGYLELDCGNVRQTPFPKIWRESKHFLQFRDQSCYSGKCGECEYHKVCGGCRARAHSMDGDHMGEEPLCTYIPAK
MRKKGRDGKSGEEK
>Mature_413_residues
SKHMHHAGGHPGGMPGSAGNPISGHPGQAEDGKHRGHPGGHGMSAPLRTLEDGSPACRLIAWEVTRSCNLACKHCRAEAH
PEPYPGELSTAEAKALIDTFTEVGKPIIIFTGGDPMIRPDVYELVAYAHSKGLPCAFSPNGTLITPETAQKIKNAGVNRC
SISIDGADAASHDSFRGVPGAFEASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCERIGAAAWHIFLLVPMGRAA
GLADQVITAQEYEDVLHWLYDFRKTTKMHLKATCAPHYYRIMRQRAKEEGVSVTPENFGMDALTRGCLGGTGFCFISHVG
QVQPCGYLELDCGNVRQTPFPKIWRESKHFLQFRDQSCYSGKCGECEYHKVCGGCRARAHSMDGDHMGEEPLCTYIPAKM
RKKGRDGKSGEEK

Specific function: Together With Moac, Is Involved In The Conversion Of A Guanosine Derivative (Gxp) Into Molybdopterin Precursor Z. [C]

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45161; Mature: 45030

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHMHHAGGHPGGMPGSAGNPISGHPGQAEDGKHRGHPGGHGMSAPLRTLEDGSPACRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEE
IAWEVTRSCNLACKHCRAEAHPEPYPGELSTAEAKALIDTFTEVGKPIIIFTGGDPMIRP
EEEEHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
DVYELVAYAHSKGLPCAFSPNGTLITPETAQKIKNAGVNRCSISIDGADAASHDSFRGVP
HHHHHHHHHHCCCCCEEECCCCCEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
GAFEASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCERIGAAAWHIFLLVPMGRA
CHHHHHHHHHHHHHHCCCCEEEECEEECCHHHHHHHHHHHHHHHHHHHEEEHHEEECCCC
AGLADQVITAQEYEDVLHWLYDFRKTTKMHLKATCAPHYYRIMRQRAKEEGVSVTPENFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCEECCCCCC
MDALTRGCLGGTGFCFISHVGQVQPCGYLELDCGNVRQTPFPKIWRESKHFLQFRDQSCY
HHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SGKCGECEYHKVCGGCRARAHSMDGDHMGEEPLCTYIPAKMRKKGRDGKSGEEK
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SKHMHHAGGHPGGMPGSAGNPISGHPGQAEDGKHRGHPGGHGMSAPLRTLEDGSPACRL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEEE
IAWEVTRSCNLACKHCRAEAHPEPYPGELSTAEAKALIDTFTEVGKPIIIFTGGDPMIRP
EEEEHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCC
DVYELVAYAHSKGLPCAFSPNGTLITPETAQKIKNAGVNRCSISIDGADAASHDSFRGVP
HHHHHHHHHHCCCCCEEECCCCCEECCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
GAFEASMRGIEYLKAAGVPFQINTTVTRNNLTSFKKIFELCERIGAAAWHIFLLVPMGRA
CHHHHHHHHHHHHHHCCCCEEEECEEECCHHHHHHHHHHHHHHHHHHHEEEHHEEECCCC
AGLADQVITAQEYEDVLHWLYDFRKTTKMHLKATCAPHYYRIMRQRAKEEGVSVTPENFG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHCCCEECCCCCC
MDALTRGCLGGTGFCFISHVGQVQPCGYLELDCGNVRQTPFPKIWRESKHFLQFRDQSCY
HHHHHHHCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCC
SGKCGECEYHKVCGGCRARAHSMDGDHMGEEPLCTYIPAKMRKKGRDGKSGEEK
CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA