Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is yfbR [C]

Identifier: 220903472

GI number: 220903472

Start: 237768

End: 238373

Strand: Direct

Name: yfbR [C]

Synonym: Ddes_0188

Alternate gene names: 220903472

Gene position: 237768-238373 (Clockwise)

Preceding gene: 220903471

Following gene: 220903473

Centisome position: 8.27

GC content: 57.76

Gene sequence:

>606_bases
ATGCCGGACGATACGCCGGATCAGAAAAGGCTGGAACGCCTGGCAGATTTTTTTAATGAAGTGGGAATGCTGCGCCATAC
TCCGCGCACGGGATACGCCTTCCTCGGTTCCGGTAAAGAAAACGTGGCCGAGCATTCTTACCGGGTCAGCGTTATGGGCT
ATGCATTGGCCCGCATGAGTGGCGTTGATCCGGCAAAAGTGACGTTCCTTTGCCTTTTTCACGATCTGCATGAGGCGCGC
ACCGGCGACCTCAATTATGTGAATCACCGTTATGCGCAATGCCAGCCCCGCCGCGCTCTGGAAGACTGTGTTGCAGGCAC
GGGCCTTGAGGACGACGTGCTGCCCCTCTGGGATGAGCTGGCAGAGAACACAAGCCCTGAAGCCATGCTGGCCCACGATG
CTGACCAGCTTGACCTTATATGCAATCTTAAAGTGGAGCTGGACAAGGGCAACGCTTTTGCCGGGCAATGGCTTGAAAGT
ACCGTCAAGCGGCTGCGCAGTCCCGCTGCCCGTGAACTGGCGGAAGTTGTGTTGCGCACGGACCATAACCGTTGGTGGTA
CGGCCGGGTAGAGAAGGACTGGTGGATTCGCCGCGGCCGGGAATGA

Upstream 100 bases:

>100_bases
AGCAGGCCCTGGGACAGCGTATTTGTGCCGCCTGGGCCGTCAACCCCATACCGGAAGCAGCATGAGCAATACACACGCTA
AAAATATGAACAGCAAGGAT

Downstream 100 bases:

>100_bases
TACTGATACGCGTTTCGACAACCCATAGAAATCACTTTACAAAATATTCAAATATACGCTAGTTTCGTTCTGTCCAGAAT
TGTAGGAAAATGCCGTTGTG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: Metal-Dependent Phosphohydrolase; HD Superfamily Hydrolase; Metal-Dependent Phosphohydrolase HD Region; Hydrolase; PIN Family xin-Antitoxin System Toxin Component; Hydrolase Of HAD Superfamily

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MPDDTPDQKRLERLADFFNEVGMLRHTPRTGYAFLGSGKENVAEHSYRVSVMGYALARMSGVDPAKVTFLCLFHDLHEAR
TGDLNYVNHRYAQCQPRRALEDCVAGTGLEDDVLPLWDELAENTSPEAMLAHDADQLDLICNLKVELDKGNAFAGQWLES
TVKRLRSPAARELAEVVLRTDHNRWWYGRVEKDWWIRRGRE

Sequences:

>Translated_201_residues
MPDDTPDQKRLERLADFFNEVGMLRHTPRTGYAFLGSGKENVAEHSYRVSVMGYALARMSGVDPAKVTFLCLFHDLHEAR
TGDLNYVNHRYAQCQPRRALEDCVAGTGLEDDVLPLWDELAENTSPEAMLAHDADQLDLICNLKVELDKGNAFAGQWLES
TVKRLRSPAARELAEVVLRTDHNRWWYGRVEKDWWIRRGRE
>Mature_200_residues
PDDTPDQKRLERLADFFNEVGMLRHTPRTGYAFLGSGKENVAEHSYRVSVMGYALARMSGVDPAKVTFLCLFHDLHEART
GDLNYVNHRYAQCQPRRALEDCVAGTGLEDDVLPLWDELAENTSPEAMLAHDADQLDLICNLKVELDKGNAFAGQWLEST
VKRLRSPAARELAEVVLRTDHNRWWYGRVEKDWWIRRGRE

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23072; Mature: 22941

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDDTPDQKRLERLADFFNEVGMLRHTPRTGYAFLGSGKENVAEHSYRVSVMGYALARMS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GVDPAKVTFLCLFHDLHEARTGDLNYVNHRYAQCQPRRALEDCVAGTGLEDDVLPLWDEL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH
AENTSPEAMLAHDADQLDLICNLKVELDKGNAFAGQWLESTVKRLRSPAARELAEVVLRT
HCCCCCCEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHC
DHNRWWYGRVEKDWWIRRGRE
CCCCEEEECCCHHHHHHCCCC
>Mature Secondary Structure 
PDDTPDQKRLERLADFFNEVGMLRHTPRTGYAFLGSGKENVAEHSYRVSVMGYALARMS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHC
GVDPAKVTFLCLFHDLHEARTGDLNYVNHRYAQCQPRRALEDCVAGTGLEDDVLPLWDEL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHH
AENTSPEAMLAHDADQLDLICNLKVELDKGNAFAGQWLESTVKRLRSPAARELAEVVLRT
HCCCCCCEEECCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHC
DHNRWWYGRVEKDWWIRRGRE
CCCCEEEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA