Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903336

Identifier: 220903336

GI number: 220903336

Start: 66603

End: 67442

Strand: Direct

Name: 220903336

Synonym: Ddes_0050

Alternate gene names: NA

Gene position: 66603-67442 (Clockwise)

Preceding gene: 220903334

Following gene: 220903349

Centisome position: 2.32

GC content: 60.6

Gene sequence:

>840_bases
ATGACAAGACGAGATTTTACCGTGTCCGCACTGTCCGCTGCCGCGGGCATGGCTCTGGCTGGCAATGCTTCCGATGCCCT
TGCTGCCGGCACTGCCGGGGAAGGCCAGAAGCCGCGGCAGGATGCGGACAAAAAGCCGCATATCGCTTTTGTGCTTTACG
AGGGAATGACCGTGCTGGATTTGATCGGCCCGGCGGAAGTTCTGGGAGGGCCGCAGTTCCGTGTGGACTATGTGTCGCGG
AGCATGGCTCCGGTGTATGCCGAAAGCCGGGCCGACAAGAGGCTTGGCTTTATGCCCACAGCCACATTTGCTAATGTGGC
TTCAGCCGATATTGTGTGTGTGCCCGGTACGAGTGATCCCTACTTGCAGATTCAGCAGCAAGATATGGTGGAATGGCTGG
CGGCGGTGGGGCAGAAGGCGCAGTGGGTTACCAGCGTCTGCACCGGGTCATTCCTGCTGGGGGCGGCCGGTCTGCTGCAA
GGTTATAAGGCCACCTCACACTGGACGCTGGTGGACGAGCTTGCCTGGTTTGGGGCACTTCCCGTGCAGGAACGTGTGGT
GCGCGACCGCAACCGTGTCACCGGAGCGGGTGTCACCTCGGGGATTGATTTCGGGCTGGTTTTGCTTGCACTGGTGGCTG
GTGAGGAAACGGCAAACATCAAGCAGCTTCTCCTGGAGTATGACCCGGCCCCGCCATTCCGAAGCGGTTCGCCCAGATCC
GCATCGCCTGCACTGGTTGAAACCGTCAGAAACCAGTACCAGGCCCATATCAGGGAAAATATGCCCTATGCCCGCAGCAG
CCTTGAGGCTGCTGCCCAGCGGCTTGGCGTCCGACGCTGA

Upstream 100 bases:

>100_bases
TGTATGGCAGGATCCCGCCGCTGTTTGGCAAGGCCGGGGCTTTTGCGATGCAACGGCCGTGCTAGTCTGGGCAATCATAA
CCACTACAGAGGACGTACCC

Downstream 100 bases:

>100_bases
CGCCGGTAAACAGGAACGGCCCTTCTGCCCGCTGGCGCGGGCAGAAGGGCCGTCGGCGGCCGTATTTTTATATGTTTTTC
CGCCGGGCGGCAGCCACCGT

Product: ThiJ/PfpI domain-containing protein

Products: NA

Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; Transcriptional Regulator; AraC Family Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI; DJ-1/PfpI Family Protein; Isonitrile Hydratase; ThiJ Family Protein; DJ-1/PfpI Family; AraC Family Transcription Regulator; Intracellular Protease/Amidase; Transcriptional Regulatory Protein; Transcription Regulator Protein; DJ-1/PfpI Superfamily Protein; Twin-Arginine Translocation Pathway Signal; PfpI Family Protein; Cyclohexyl-Isocyanide Hydratase; Hydratase; Transcriptional Activator FtrA; ThiH/PfpI Family Amidotransferase; AraC-Family Transcriptional Regulator; Thij/Pfpi Family Protein; Transcription Regulator Protein ThiJ/PfpI; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator Protein Thij/Pfpi; Transcriptional Regulator Protein; ThiJ/PfpI Family Transcriptional Regulator Protein; DsbA Family ThiolDisulfide Interchange Protein; Transcription Regulator Protein Thij/Pfpi; Transcriptional Regulator ThiJ/PfpI Family Protein; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 279; Mature: 278

Protein sequence:

>279_residues
MTRRDFTVSALSAAAGMALAGNASDALAAGTAGEGQKPRQDADKKPHIAFVLYEGMTVLDLIGPAEVLGGPQFRVDYVSR
SMAPVYAESRADKRLGFMPTATFANVASADIVCVPGTSDPYLQIQQQDMVEWLAAVGQKAQWVTSVCTGSFLLGAAGLLQ
GYKATSHWTLVDELAWFGALPVQERVVRDRNRVTGAGVTSGIDFGLVLLALVAGEETANIKQLLLEYDPAPPFRSGSPRS
ASPALVETVRNQYQAHIRENMPYARSSLEAAAQRLGVRR

Sequences:

>Translated_279_residues
MTRRDFTVSALSAAAGMALAGNASDALAAGTAGEGQKPRQDADKKPHIAFVLYEGMTVLDLIGPAEVLGGPQFRVDYVSR
SMAPVYAESRADKRLGFMPTATFANVASADIVCVPGTSDPYLQIQQQDMVEWLAAVGQKAQWVTSVCTGSFLLGAAGLLQ
GYKATSHWTLVDELAWFGALPVQERVVRDRNRVTGAGVTSGIDFGLVLLALVAGEETANIKQLLLEYDPAPPFRSGSPRS
ASPALVETVRNQYQAHIRENMPYARSSLEAAAQRLGVRR
>Mature_278_residues
TRRDFTVSALSAAAGMALAGNASDALAAGTAGEGQKPRQDADKKPHIAFVLYEGMTVLDLIGPAEVLGGPQFRVDYVSRS
MAPVYAESRADKRLGFMPTATFANVASADIVCVPGTSDPYLQIQQQDMVEWLAAVGQKAQWVTSVCTGSFLLGAAGLLQG
YKATSHWTLVDELAWFGALPVQERVVRDRNRVTGAGVTSGIDFGLVLLALVAGEETANIKQLLLEYDPAPPFRSGSPRSA
SPALVETVRNQYQAHIRENMPYARSSLEAAAQRLGVRR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29840; Mature: 29709

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRDFTVSALSAAAGMALAGNASDALAAGTAGEGQKPRQDADKKPHIAFVLYEGMTVLD
CCCCCHHHHHHHHHHCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHH
LIGPAEVLGGPQFRVDYVSRSMAPVYAESRADKRLGFMPTATFANVASADIVCVPGTSDP
HCCCHHHHCCCCEEHHHHHHCCCHHHHHHCCHHHCCCCCCHHHHHHCCCCEEEECCCCCC
YLQIQQQDMVEWLAAVGQKAQWVTSVCTGSFLLGAAGLLQGYKATSHWTLVDELAWFGAL
CEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PVQERVVRDRNRVTGAGVTSGIDFGLVLLALVAGEETANIKQLLLEYDPAPPFRSGSPRS
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
ASPALVETVRNQYQAHIRENMPYARSSLEAAAQRLGVRR
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRRDFTVSALSAAAGMALAGNASDALAAGTAGEGQKPRQDADKKPHIAFVLYEGMTVLD
CCCCHHHHHHHHHHCEEEECCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEHH
LIGPAEVLGGPQFRVDYVSRSMAPVYAESRADKRLGFMPTATFANVASADIVCVPGTSDP
HCCCHHHHCCCCEEHHHHHHCCCHHHHHHCCHHHCCCCCCHHHHHHCCCCEEEECCCCCC
YLQIQQQDMVEWLAAVGQKAQWVTSVCTGSFLLGAAGLLQGYKATSHWTLVDELAWFGAL
CEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PVQERVVRDRNRVTGAGVTSGIDFGLVLLALVAGEETANIKQLLLEYDPAPPFRSGSPRS
CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
ASPALVETVRNQYQAHIRENMPYARSSLEAAAQRLGVRR
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA