| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is glsA
Identifier: 220903334
GI number: 220903334
Start: 64339
End: 65271
Strand: Direct
Name: glsA
Synonym: Ddes_0048
Alternate gene names: 220903334
Gene position: 64339-65271 (Clockwise)
Preceding gene: 220903333
Following gene: 220903336
Centisome position: 2.24
GC content: 59.16
Gene sequence:
>933_bases ATGCCTGCTATTGAAAAAATCCAGTCTGTGGTGAACAGCGCGTACGCGCAATTCAGCAAGGCCTCCGGCGGGGCCAATGC CGATTACATACCTTTTCTGGCAAATATACCGAGCGACCTTGCAGCCGTGGCTGTGGTGACGGCCCAGGGGCAGGTGGCGG CGGCTGGCGATGCGCAATACCGCTTTGCCATCGAATCCATTTCAAAGGTCTGCACGCTGGCGCTGGCGCTGGAAGACTTC GGCCCGCAGGCCGTACAGGAAAAGATAGGCACCAGCCCTACGGGGCTGCCCTTTAATTCGGTTATGGCGCTGGAACTGCA CGGCGACAAACCCCTTTCTCCGCTGGTGAACGCCGGGGCCATGGCCTCGGCCAGCCTTGTGAAGGCAGGCTCCACAGAAG AGCGCTGGCAGCGGATATTGGACATGCAGCGCAGGCTAGGCTCAAAGGAAATAGCCATTTCTGACGAACTGAACCAGTCG GAGCAGACCACAAACTTTCACAACCGGGGCATTGCCTGGCTGCTGTATTCCGCAGGCTATATGTACTGCGACCCCATGGA AGCCTGCGATGTATACACACGCCAGTGCTCGACCCTGCTCAATACCGTGGAGCTTGCTACTGTCGGCGCTACCATTGCCG CACGCGGGCGCAACCCCGTTACCGGCGAACAGGTGCTCAAGCCCGAGCACTGCCCCTGCATCATGGCTGAAATGACCATG GAGGGCATGTATGACAGTTCTGGCGACTGGGCGTACAAGGTGGGCCTGCCGGGCAAGAGCGGCGTTGGAGGCGGCATATT GACGATTGTGCCGGGCATTATGGCCATCGCGGCCTTTTCGCCGCCTCTGGACAGCGTGGGCAACAGTGTGCGCGGGCAGA AGATGGCGGCCTTTGTGGCCAATGAACTGGGATATAATCTGTATAAAGCCTGA
Upstream 100 bases:
>100_bases CAGGCCGGAAGCTAGCGCCCGGTATTTCATGACAAGATAACAGTTTGTAATAAAGCCGTAATAGCTTTGCTATTGCGGCT TTATTTAAAAGGAAAACACC
Downstream 100 bases:
>100_bases TAGGCTGGCTCACCGCGCGTCGGGCACAGCTTGTGCCTCCGGCGCTGGGTGTTTGCCCTTTTCGGCCCCCCGGCAGGTAT GCAGGGGGGCCGTTTTTTGC
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPAIEKIQSVVNSAYAQFSKASGGANADYIPFLANIPSDLAAVAVVTAQGQVAAAGDAQYRFAIESISKVCTLALALEDF GPQAVQEKIGTSPTGLPFNSVMALELHGDKPLSPLVNAGAMASASLVKAGSTEERWQRILDMQRRLGSKEIAISDELNQS EQTTNFHNRGIAWLLYSAGYMYCDPMEACDVYTRQCSTLLNTVELATVGATIAARGRNPVTGEQVLKPEHCPCIMAEMTM EGMYDSSGDWAYKVGLPGKSGVGGGILTIVPGIMAIAAFSPPLDSVGNSVRGQKMAAFVANELGYNLYKA
Sequences:
>Translated_310_residues MPAIEKIQSVVNSAYAQFSKASGGANADYIPFLANIPSDLAAVAVVTAQGQVAAAGDAQYRFAIESISKVCTLALALEDF GPQAVQEKIGTSPTGLPFNSVMALELHGDKPLSPLVNAGAMASASLVKAGSTEERWQRILDMQRRLGSKEIAISDELNQS EQTTNFHNRGIAWLLYSAGYMYCDPMEACDVYTRQCSTLLNTVELATVGATIAARGRNPVTGEQVLKPEHCPCIMAEMTM EGMYDSSGDWAYKVGLPGKSGVGGGILTIVPGIMAIAAFSPPLDSVGNSVRGQKMAAFVANELGYNLYKA >Mature_309_residues PAIEKIQSVVNSAYAQFSKASGGANADYIPFLANIPSDLAAVAVVTAQGQVAAAGDAQYRFAIESISKVCTLALALEDFG PQAVQEKIGTSPTGLPFNSVMALELHGDKPLSPLVNAGAMASASLVKAGSTEERWQRILDMQRRLGSKEIAISDELNQSE QTTNFHNRGIAWLLYSAGYMYCDPMEACDVYTRQCSTLLNTVELATVGATIAARGRNPVTGEQVLKPEHCPCIMAEMTME GMYDSSGDWAYKVGLPGKSGVGGGILTIVPGIMAIAAFSPPLDSVGNSVRGQKMAAFVANELGYNLYKA
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family
Homologues:
Organism=Homo sapiens, GI156104878, Length=296, Percent_Identity=37.1621621621622, Blast_Score=189, Evalue=4e-48, Organism=Homo sapiens, GI20336214, Length=312, Percent_Identity=33.0128205128205, Blast_Score=162, Evalue=3e-40, Organism=Escherichia coli, GI1786693, Length=304, Percent_Identity=72.0394736842105, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI1787804, Length=286, Percent_Identity=38.1118881118881, Blast_Score=196, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17507019, Length=314, Percent_Identity=33.7579617834395, Blast_Score=176, Evalue=1e-44, Organism=Caenorhabditis elegans, GI17532727, Length=313, Percent_Identity=32.5878594249201, Blast_Score=172, Evalue=2e-43, Organism=Caenorhabditis elegans, GI193204073, Length=322, Percent_Identity=30.1242236024845, Blast_Score=154, Evalue=5e-38, Organism=Caenorhabditis elegans, GI193204075, Length=324, Percent_Identity=29.9382716049383, Blast_Score=153, Evalue=1e-37, Organism=Drosophila melanogaster, GI281363241, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24653164, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=7e-41, Organism=Drosophila melanogaster, GI24653162, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=8e-41, Organism=Drosophila melanogaster, GI24653156, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI281363239, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=9e-41, Organism=Drosophila melanogaster, GI24653158, Length=319, Percent_Identity=31.6614420062696, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI24653166, Length=319, Percent_Identity=31.6614420062696, Blast_Score=163, Evalue=1e-40, Organism=Drosophila melanogaster, GI116008307, Length=319, Percent_Identity=31.6614420062696, Blast_Score=163, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLSA_DESDA (B8J1X3)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002478646.1 - ProteinModelPortal: B8J1X3 - GeneID: 7283699 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_0048 - HOGENOM: HBG512335 - ProtClustDB: PRK12356 - HAMAP: MF_00313 - InterPro: IPR012338 - InterPro: IPR015868 - Gene3D: G3DSA:3.40.710.20 - PANTHER: PTHR12544 - TIGRFAMs: TIGR03814
Pfam domain/function: PF04960 Glutaminase; SSF56601 PBP_transp_fold
EC number: =3.5.1.2
Molecular weight: Translated: 32784; Mature: 32653
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAIEKIQSVVNSAYAQFSKASGGANADYIPFLANIPSDLAAVAVVTAQGQVAAAGDAQY CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHEEEEECCCCEEECCCCHH RFAIESISKVCTLALALEDFGPQAVQEKIGTSPTGLPFNSVMALELHGDKPLSPLVNAGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHCCCC MASASLVKAGSTEERWQRILDMQRRLGSKEIAISDELNQSEQTTNFHNRGIAWLLYSAGY HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHCCEEEEEECCCC MYCDPMEACDVYTRQCSTLLNTVELATVGATIAARGRNPVTGEQVLKPEHCPCIMAEMTM EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCHHHHHHH EGMYDSSGDWAYKVGLPGKSGVGGGILTIVPGIMAIAAFSPPLDSVGNSVRGQKMAAFVA HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH NELGYNLYKA HHHCCHHHCC >Mature Secondary Structure PAIEKIQSVVNSAYAQFSKASGGANADYIPFLANIPSDLAAVAVVTAQGQVAAAGDAQY CHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHEEEEECCCCEEECCCCHH RFAIESISKVCTLALALEDFGPQAVQEKIGTSPTGLPFNSVMALELHGDKPLSPLVNAGA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHCCCC MASASLVKAGSTEERWQRILDMQRRLGSKEIAISDELNQSEQTTNFHNRGIAWLLYSAGY HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCHHHCCEEEEEECCCC MYCDPMEACDVYTRQCSTLLNTVELATVGATIAARGRNPVTGEQVLKPEHCPCIMAEMTM EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHCCCCCCCCHHHHHHH EGMYDSSGDWAYKVGLPGKSGVGGGILTIVPGIMAIAAFSPPLDSVGNSVRGQKMAAFVA HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHH NELGYNLYKA HHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA