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The map label for this gene is dcrA [H]

Identifier: 220903349

GI number: 220903349

Start: 82479

End: 84047

Strand: Direct

Name: dcrA [H]

Synonym: Ddes_0063

Alternate gene names: 220903349

Gene position: 82479-84047 (Clockwise)

Preceding gene: 220903336

Following gene: 220903351

Centisome position: 2.87

GC content: 62.72

Gene sequence:

>1569_bases
ATGTCGCTGCAAAGAAAAATCTGGGTTCTGGGCTGTATTGCCCTGGCCGTGGCTACAGGTCTTGCCTGGGCTGCGGTGCT
GTTGGGGGGCATGCCGGCGGGCACGGTATGGGGCGCGGCAGCCGGGGGGCTGCTGGTTCTGCTTGTTCTGGGCTTTGGGC
TGGGGCAGGCTTACGGCAGGGCCATTCCGGCGCTGGCGCAATGCCTGCGTGGTGGCGCAGAAGGCAGGGGTGATATGCCC
GCATGCTGTTCGCCGCAGGCAGTCCCCGGCGACCTTCAGAAAATTTACGCGGCGGCGTATGACATGGCGGCCAGCCTGCG
GCGCACGGACGGCGTACTGCACGGAATTCTCACGGGCATGCCTTTGCCCTATCTGCTGGTGGACGAAAACGAGCGCGCCA
CCAGTACCAATCAGGCCTGCCTGGATATGCTTGAAATCGACGGCCCGGTAAAAAACTGCCTGGGTAAAACCCTGGCCGAG
CTTTTTTATAATGACGCCAGCCGCGATACGGCGGTGGGCAAGAGCATACGCACGGGCCAGTATTTCCATAACCTGTCGGT
AACCATCGCGGGGCACAAGGGACGGCGCATAGATGTGCTGGCCAATGTTTTTCCCGTGTATGACAAGCAGAAAAACTGCC
TTGGCGGCCTGTGCCTTTATGTGGACATGACCGCCCTCAAGGAAGCCGAGCAGATGATCAAGGACAAGAACGAGCGCATG
CGCGCTGCCGCGCAGGAACTTGATGGCGCGGTGCAGGAGCTTGCCGCCATTTCTGAAGGGCTTGTGGCGGGCATAGGCCG
TTCCGACAACGATGCCGCCCGCGCGGCGCGTTTGCTGACCGAAGCCGCCACGGCCATGAATCAAATGACGGCCACCGTGC
GCGAGGTGGCCCATAATGCGGCCGACGCCTCCACCGCCTCTGCCCAGACCCGCGACAAGGCTCATGAAGGCGCTCAGGTG
GTAAGCAACGTGACGCAGAGCATCGACGAAGTGCATGAGGTGTCCATGGCGCTCAAGAGCGACATGGCTCTTCTGGACCG
CCACGCCAGAGACATCACCGAGATCATGAACGTCATCTCCGACATTGCTGACCAGACCAACCTGCTGGCCCTCAATGCCG
CCATCGAGGCTGCCCGCGCCGGAGACGCCGGACGCGGCTTTGCCGTGGTGGCCGACGAGGTGCGCAAGCTGGCCGAAAAA
ACCATGACGTCCACCAGCGACGTGGGCAGCGCCATCGGGTCCATCCAGCAGAGTACCGCCAAGAGCATGACCTCGATGGA
CAGTGCGGTAACCCAGGTGGAGCAGGCCACGGCCTATGCCGGAAAATCGGGTCAGGCGCTCAACGCCATCGTGGGTACGG
TGGAAGACACCGTGGCCCAGATCAGCGCCATTGCGGCGGCCAGCGAGCAGCAGTCCGTCGCCAGCGAGCAGATCAACCGC
TCCATTGATGAGGTCAACAACGTCATGGCCGGCACTGCCAGATCCATGGCCGAGGCCCGTCAGGAAACGGACAGGCTCGT
GGCCCTCATTGAGCGGCTGGCCGACCTGACGGCGCGTCTGCAGGAATGA

Upstream 100 bases:

>100_bases
AGCGCTGTTCATTTGCGCTGGTAAGCGCCGTAGTGAGCGCCGGAAAGCTCTGGGAGTAATATTCTCGAAGTTAAAATGCT
CTGTAGTTTAAGGAGGAGCC

Downstream 100 bases:

>100_bases
TCTGCATCTTTTATCGCCAGTCCCTCGCGGGCGGTCCGGTCAGTCTGTGTCCGTTCCGTCCGTGAGGCGGCCCTGGCGCG
GCATTGTTGATGCCCCCGCC

Product: Pas/Pac sensor-containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 522; Mature: 521

Protein sequence:

>522_residues
MSLQRKIWVLGCIALAVATGLAWAAVLLGGMPAGTVWGAAAGGLLVLLVLGFGLGQAYGRAIPALAQCLRGGAEGRGDMP
ACCSPQAVPGDLQKIYAAAYDMAASLRRTDGVLHGILTGMPLPYLLVDENERATSTNQACLDMLEIDGPVKNCLGKTLAE
LFYNDASRDTAVGKSIRTGQYFHNLSVTIAGHKGRRIDVLANVFPVYDKQKNCLGGLCLYVDMTALKEAEQMIKDKNERM
RAAAQELDGAVQELAAISEGLVAGIGRSDNDAARAARLLTEAATAMNQMTATVREVAHNAADASTASAQTRDKAHEGAQV
VSNVTQSIDEVHEVSMALKSDMALLDRHARDITEIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK
TMTSTSDVGSAIGSIQQSTAKSMTSMDSAVTQVEQATAYAGKSGQALNAIVGTVEDTVAQISAIAAASEQQSVASEQINR
SIDEVNNVMAGTARSMAEARQETDRLVALIERLADLTARLQE

Sequences:

>Translated_522_residues
MSLQRKIWVLGCIALAVATGLAWAAVLLGGMPAGTVWGAAAGGLLVLLVLGFGLGQAYGRAIPALAQCLRGGAEGRGDMP
ACCSPQAVPGDLQKIYAAAYDMAASLRRTDGVLHGILTGMPLPYLLVDENERATSTNQACLDMLEIDGPVKNCLGKTLAE
LFYNDASRDTAVGKSIRTGQYFHNLSVTIAGHKGRRIDVLANVFPVYDKQKNCLGGLCLYVDMTALKEAEQMIKDKNERM
RAAAQELDGAVQELAAISEGLVAGIGRSDNDAARAARLLTEAATAMNQMTATVREVAHNAADASTASAQTRDKAHEGAQV
VSNVTQSIDEVHEVSMALKSDMALLDRHARDITEIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK
TMTSTSDVGSAIGSIQQSTAKSMTSMDSAVTQVEQATAYAGKSGQALNAIVGTVEDTVAQISAIAAASEQQSVASEQINR
SIDEVNNVMAGTARSMAEARQETDRLVALIERLADLTARLQE
>Mature_521_residues
SLQRKIWVLGCIALAVATGLAWAAVLLGGMPAGTVWGAAAGGLLVLLVLGFGLGQAYGRAIPALAQCLRGGAEGRGDMPA
CCSPQAVPGDLQKIYAAAYDMAASLRRTDGVLHGILTGMPLPYLLVDENERATSTNQACLDMLEIDGPVKNCLGKTLAEL
FYNDASRDTAVGKSIRTGQYFHNLSVTIAGHKGRRIDVLANVFPVYDKQKNCLGGLCLYVDMTALKEAEQMIKDKNERMR
AAAQELDGAVQELAAISEGLVAGIGRSDNDAARAARLLTEAATAMNQMTATVREVAHNAADASTASAQTRDKAHEGAQVV
SNVTQSIDEVHEVSMALKSDMALLDRHARDITEIMNVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKT
MTSTSDVGSAIGSIQQSTAKSMTSMDSAVTQVEQATAYAGKSGQALNAIVGTVEDTVAQISAIAAASEQQSVASEQINRS
IDEVNNVMAGTARSMAEARQETDRLVALIERLADLTARLQE

Specific function: Receptor For The Attractant L-Aspartate And Related Amino And Dicarboxylic Acids. Tar Also Mediates Taxis To The Attractant Maltose VIa An Interaction With The Periplasmic Maltose Binding Protein. Tar Mediates Taxis Away From The Repellents Cobalt And Ni

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=210, Percent_Identity=34.7619047619048, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI2367378, Length=210, Percent_Identity=36.6666666666667, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787690, Length=409, Percent_Identity=28.8508557457213, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788194, Length=282, Percent_Identity=30.8510638297872, Blast_Score=98, Evalue=2e-21,
Organism=Escherichia coli, GI1789453, Length=258, Percent_Identity=27.5193798449612, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 54820; Mature: 54689

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQRKIWVLGCIALAVATGLAWAAVLLGGMPAGTVWGAAAGGLLVLLVLGFGLGQAYGR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPALAQCLRGGAEGRGDMPACCSPQAVPGDLQKIYAAAYDMAASLRRTDGVLHGILTGM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLPYLLVDENERATSTNQACLDMLEIDGPVKNCLGKTLAELFYNDASRDTAVGKSIRTGQ
CCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCH
YFHNLSVTIAGHKGRRIDVLANVFPVYDKQKNCLGGLCLYVDMTALKEAEQMIKDKNERM
HHHCEEEEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAAQELDGAVQELAAISEGLVAGIGRSDNDAARAARLLTEAATAMNQMTATVREVAHNA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADASTASAQTRDKAHEGAQVVSNVTQSIDEVHEVSMALKSDMALLDRHARDITEIMNVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTSTSDVGSAIGSIQQSTA
HHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KSMTSMDSAVTQVEQATAYAGKSGQALNAIVGTVEDTVAQISAIAAASEQQSVASEQINR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIDEVNNVMAGTARSMAEARQETDRLVALIERLADLTARLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLQRKIWVLGCIALAVATGLAWAAVLLGGMPAGTVWGAAAGGLLVLLVLGFGLGQAYGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPALAQCLRGGAEGRGDMPACCSPQAVPGDLQKIYAAAYDMAASLRRTDGVLHGILTGM
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PLPYLLVDENERATSTNQACLDMLEIDGPVKNCLGKTLAELFYNDASRDTAVGKSIRTGQ
CCCEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCHHCCH
YFHNLSVTIAGHKGRRIDVLANVFPVYDKQKNCLGGLCLYVDMTALKEAEQMIKDKNERM
HHHCEEEEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RAAAQELDGAVQELAAISEGLVAGIGRSDNDAARAARLLTEAATAMNQMTATVREVAHNA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADASTASAQTRDKAHEGAQVVSNVTQSIDEVHEVSMALKSDMALLDRHARDITEIMNVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMTSTSDVGSAIGSIQQSTA
HHHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KSMTSMDSAVTQVEQATAYAGKSGQALNAIVGTVEDTVAQISAIAAASEQQSVASEQINR
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIDEVNNVMAGTARSMAEARQETDRLVALIERLADLTARLQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]