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The map label for this gene is yulF [H]

Identifier: 21909846

GI number: 21909846

Start: 351714

End: 352673

Strand: Direct

Name: yulF [H]

Synonym: SpyM3_0310

Alternate gene names: 21909846

Gene position: 351714-352673 (Clockwise)

Preceding gene: 21909845

Following gene: 21909847

Centisome position: 18.51

GC content: 41.98

Gene sequence:

>960_bases
ATGAAATTAGCGGTTTTGGGAACAGGTATGATTGTTAAGGAAGCTTTGCCTGTCTTGCAGAAAATTGATGGTATTGATTT
AGTTGCTATCTTATCAACAGTTAGAAGTTTAACGACAGCTAAAGACCTCGCTAAGGCATATAAGATGCCTCTAGCTACGA
GTAAATATGAGACTGTCTTAGGCAATGAGGAGATTGACACAGTTTATATTGGACTGCCGAATCACCTGCATTTTGCCTAT
GCTAAGGAGGCCCTTCTAGCTGGTAAACATGTCATTTGTGAAAAGCCCTTTACCCTGACAGCAGGGGAATTAGATGAACT
AGTGGTAATCGCTAAAAAACGAAAGCTCATTTTGTTAGAAGCGATTACGAATCAGTATTTAAGCAACATGACCTTTATCA
AAGAGCATCTTGACCAACTTGGTGATATCAAAATTGTAGAGTGCAACTATTCTCAGTATTCGTCTCGTTATGACGCCTTT
AAACAAGGTGACATAGCACCAGCCTTTGACCCTCAAAAAGGAGGCGGAGCCTTACGCGATTTAAATATCTACAATATTCA
TTTTGTGGTAGGATTATTTGGTCGCCCTAAAACGGTTCAATATTTAGCCAATGTCGAAAAAGGCATTGACACCTCAGGCA
TGCTTGTCATGGACTATGAGCAGTTTAAAGTGGTGTGTATCGGGGCCAAAGACTGCACTGCGGAAATCAAATCAACCATC
CAAGGTAATAAAGGGTCACTGGCAGTGCTTGGAGCAACAAATACCCTTCCTCAGGTTGAGTTAAGTCTACACGGTCACGA
AGCACAAGTGGTTAATCACAACAAGCATGACCACCGGATGTATGAAGAGTTTGTCGCTTTTAGGGACATGATTGACCAAA
GAGACTTTGAGAAAGTGAATCAGGCTTTGGAACATAGCCGAGCTGTCATGTCTGTGTTGGAGCGGGCTGTTCATTCGTGA

Upstream 100 bases:

>100_bases
TGACGGTGGCTGGACTTTGAAATGATCACATGCCTTAGCTTGAGCTGGCGCAGTAAGCCCTAGAGGTGTGATGAGTCAAA
CAGTCAAAGGAGATGAACAA

Downstream 100 bases:

>100_bases
TGGTAATCTGGTAGCCATTGCCTTTTGTGCAGTTGCTATGGTAATGGTTGAAAGACGTGTTTTCACGAGGGTTAACCCCC
TCGTGCTTTTTTGGTAAAAA

Product: NAD-dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKLAVLGTGMIVKEALPVLQKIDGIDLVAILSTVRSLTTAKDLAKAYKMPLATSKYETVLGNEEIDTVYIGLPNHLHFAY
AKEALLAGKHVICEKPFTLTAGELDELVVIAKKRKLILLEAITNQYLSNMTFIKEHLDQLGDIKIVECNYSQYSSRYDAF
KQGDIAPAFDPQKGGGALRDLNIYNIHFVVGLFGRPKTVQYLANVEKGIDTSGMLVMDYEQFKVVCIGAKDCTAEIKSTI
QGNKGSLAVLGATNTLPQVELSLHGHEAQVVNHNKHDHRMYEEFVAFRDMIDQRDFEKVNQALEHSRAVMSVLERAVHS

Sequences:

>Translated_319_residues
MKLAVLGTGMIVKEALPVLQKIDGIDLVAILSTVRSLTTAKDLAKAYKMPLATSKYETVLGNEEIDTVYIGLPNHLHFAY
AKEALLAGKHVICEKPFTLTAGELDELVVIAKKRKLILLEAITNQYLSNMTFIKEHLDQLGDIKIVECNYSQYSSRYDAF
KQGDIAPAFDPQKGGGALRDLNIYNIHFVVGLFGRPKTVQYLANVEKGIDTSGMLVMDYEQFKVVCIGAKDCTAEIKSTI
QGNKGSLAVLGATNTLPQVELSLHGHEAQVVNHNKHDHRMYEEFVAFRDMIDQRDFEKVNQALEHSRAVMSVLERAVHS
>Mature_319_residues
MKLAVLGTGMIVKEALPVLQKIDGIDLVAILSTVRSLTTAKDLAKAYKMPLATSKYETVLGNEEIDTVYIGLPNHLHFAY
AKEALLAGKHVICEKPFTLTAGELDELVVIAKKRKLILLEAITNQYLSNMTFIKEHLDQLGDIKIVECNYSQYSSRYDAF
KQGDIAPAFDPQKGGGALRDLNIYNIHFVVGLFGRPKTVQYLANVEKGIDTSGMLVMDYEQFKVVCIGAKDCTAEIKSTI
QGNKGSLAVLGATNTLPQVELSLHGHEAQVVNHNKHDHRMYEEFVAFRDMIDQRDFEKVNQALEHSRAVMSVLERAVHS

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=259, Percent_Identity=25.8687258687259, Blast_Score=98, Evalue=1e-20,
Organism=Escherichia coli, GI145693182, Length=294, Percent_Identity=30.952380952381, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI87081947, Length=260, Percent_Identity=25.3846153846154, Blast_Score=71, Evalue=8e-14,
Organism=Escherichia coli, GI1789848, Length=205, Percent_Identity=29.2682926829268, Blast_Score=68, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24581117, Length=214, Percent_Identity=26.6355140186916, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35449; Mature: 35449

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLAVLGTGMIVKEALPVLQKIDGIDLVAILSTVRSLTTAKDLAKAYKMPLATSKYETVL
CEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GNEEIDTVYIGLPNHLHFAYAKEALLAGKHVICEKPFTLTAGELDELVVIAKKRKLILLE
CCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEECCCHHHEEEEECCCCEEEHH
AITNQYLSNMTFIKEHLDQLGDIKIVECNYSQYSSRYDAFKQGDIAPAFDPQKGGGALRD
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
LNIYNIHFVVGLFGRPKTVQYLANVEKGIDTSGMLVMDYEQFKVVCIGAKDCTAEIKSTI
CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHH
QGNKGSLAVLGATNTLPQVELSLHGHEAQVVNHNKHDHRMYEEFVAFRDMIDQRDFEKVN
CCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QALEHSRAVMSVLERAVHS
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLAVLGTGMIVKEALPVLQKIDGIDLVAILSTVRSLTTAKDLAKAYKMPLATSKYETVL
CEEEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHC
GNEEIDTVYIGLPNHLHFAYAKEALLAGKHVICEKPFTLTAGELDELVVIAKKRKLILLE
CCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEECCCCEEECCCHHHEEEEECCCCEEEHH
AITNQYLSNMTFIKEHLDQLGDIKIVECNYSQYSSRYDAFKQGDIAPAFDPQKGGGALRD
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEE
LNIYNIHFVVGLFGRPKTVQYLANVEKGIDTSGMLVMDYEQFKVVCIGAKDCTAEIKSTI
CEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCHHHHHHHHHH
QGNKGSLAVLGATNTLPQVELSLHGHEAQVVNHNKHDHRMYEEFVAFRDMIDQRDFEKVN
CCCCCCEEEEECCCCCCEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QALEHSRAVMSVLERAVHS
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]