| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is pntA [H]
Identifier: 218929395
GI number: 218929395
Start: 2590044
End: 2591570
Strand: Reverse
Name: pntA [H]
Synonym: YPO2303
Alternate gene names: 218929395
Gene position: 2591570-2590044 (Counterclockwise)
Preceding gene: 218929396
Following gene: 218929394
Centisome position: 55.69
GC content: 51.34
Gene sequence:
>1527_bases ATGCGTATTGGTGTACCAAGAGAGCGGTTGGCCAATGAAGCCAGGGTTGCAGCAACGCCGAAAACGGTGGAACAATTGCT GAAATTAGGCTTCACCGTGGCAATTGAAAGTGGAGCGGGGCATTTAGCCAGCTTTGACGATGCGGCGTACCAAGAAGCGG GTGCCATCATTACGGATACCACTGATGTGTGGCAATCCGATCTTATCCTGAAGGTGAATGCTCCCTTTGAGGATGAAATT GCGCTGATGCGTGAGGGGAGCACGTTGGTCAGTTTTATTTGGCCCGCTCAGAACCCTGAGTTGCTGCAAAAACTGGCAGA GCGTCAAGTTACTGCATTAGCGATGGATTCAGTGCCGCGTATCTCCCGTGCGCAATCCATGGATGCCCTCAGCTCCATGG CAAATATTGCCGGTTACCGTGCCATTGTTGAAGCGGCTCATGAATTTGGCCGTTTCTTCACCGGGCAGATCACCGCGGCG GGTAAAGTTCCACCTGCGAAGGTGATGGTTATTGGTGCCGGAGTCGCTGGTCTGGCGGCTATCGGTGCGGCGGGGAGCCT CGGGGCTATCGTGCGTGCTTTTGACACCCGTCCTGAAGTAAAAGAACAAGTCCAGAGTATGGGCGCTGAATTCCTTGAGT TGGATTTTGAAGAGGAAGCGGGCAGTGGCGATGGTTACGCCAAAGTGATGTCCGAGGCCTTTATCAAAGCTGAGATGGAA CTGTTTGCTGCGCAAGCCGCAGAAGTAGACATTATCGTCACTACCGCGCTGATCCCTGGTAGACCAGCACCGCGCCTGAT CACCAAAGAGATGGTGGCGTCGATGAAGTCGGGCAGCGTGATTGTCGATCTGGCGGCTCAGACAGGCGGTAACTGTGAGT TGACGGTAGCTGATGAAGTCACCATCACGGAAAATGGCGTAAAAATCATTGGCTATACAGATCTGCCAAGCCGCTTACCG ACGCAGTCTTCACAGCTCTATGGTACTAACCTCGTTAACTTATTGAAGTTACTTTGCAAAGAGAAAAACGGCGAGATCGA TATTGATTTCGACGATACCGTGATTCGCGGTGTTACTGTGGTTAAAACTGGCGAAGTGACTTGGCCGGCACCACCTATTC AGGTTTCAGCTCAGCCGCAGGCTGCCAAAGCGGCCCCAATAGCGAAGGAAGAAACGAAGCCCTCATCACCGTGGACCAAA TACATCATTATGGCAGTTGCTATTGTGTTGTTTGGTTGGTTGGCGAATGTGGCACCACCAGAATTCTTATCTCACTTTAC GGTCTTTGCACTGGCGTGTGTAGTCGGTTACTACGTGGTATGGAATGTCAGTCATGCGCTGCATACACCGCTGATGTCAG TCACTAACGCGATTTCGGGCATTATTGTGGTTGGCGCGTTGTTGCAGATTGGTCATGGTGGCTGGGTAAGTTTCTTCTCC TTTATTGCCGTACTGATTGCTAGCATCAACATTTTTGGTGGCTTCACTGTCACCCAGCGCATGCTGAAAATGTTCCGTAA AAACTAA
Upstream 100 bases:
>100_bases AGGGAGCGTAACTCAGCAGGTTTTGTCGGTGAACAAACAGAACCGAACGATAAGCAGGATGACAATACTCATCATCAAAA ACAGGTAAAAAGGGGACATT
Downstream 100 bases:
>100_bases TGTTCCGTAAAAACCAAGCTACATAGAAATTAGCTGGTATAAAAATGTCATATAAAAACAAAGGGGTAACTGATGTCTAG TGGTCTCGTTACAGCTGCGT
Product: NAD(P) transhydrogenase subunit alpha
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha; Pyridine nucleotide transhydrogenase subunit alpha [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKEMVASMKSGSVIVDLAAQTGGNCELTVADEVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIAKEETKPSSPWTK YIIMAVAIVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN
Sequences:
>Translated_508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKEMVASMKSGSVIVDLAAQTGGNCELTVADEVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIAKEETKPSSPWTK YIIMAVAIVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN >Mature_508_residues MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDTTDVWQSDLILKVNAPFEDEI ALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPRISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA GKVPPAKVMVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME LFAAQAAEVDIIVTTALIPGRPAPRLITKEMVASMKSGSVIVDLAAQTGGNCELTVADEVTITENGVKIIGYTDLPSRLP TQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTVVKTGEVTWPAPPIQVSAQPQAAKAAPIAKEETKPSSPWTK YIIMAVAIVLFGWLANVAPPEFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS FIAVLIASINIFGGFTVTQRMLKMFRKN
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=532, Percent_Identity=51.1278195488722, Blast_Score=488, Evalue=1e-138, Organism=Homo sapiens, GI122939153, Length=532, Percent_Identity=51.1278195488722, Blast_Score=488, Evalue=1e-138, Organism=Escherichia coli, GI1787887, Length=510, Percent_Identity=83.7254901960784, Blast_Score=872, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=518, Percent_Identity=50, Blast_Score=474, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 - InterPro: IPR004571 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 54271; Mature: 54271
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00836 ALADH_PNT_1 ; PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCEEECC TDVWQSDLILKVNAPFEDEIALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPR HHHHCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGRPAPRLITKEMVASMKSGSVIVDLAAQTGGNCELTVADEV HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCE TITENGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCEEE VKTGEVTWPAPPIQVSAQPQAAKAAPIAKEETKPSSPWTKYIIMAVAIVLFGWLANVAPP EEECCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MRIGVPRERLANEARVAATPKTVEQLLKLGFTVAIESGAGHLASFDDAAYQEAGAIITDT CCCCCCHHHHCCCHHCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHCCCEEECC TDVWQSDLILKVNAPFEDEIALMREGSTLVSFIWPAQNPELLQKLAERQVTALAMDSVPR HHHHCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCH ISRAQSMDALSSMANIAGYRAIVEAAHEFGRFFTGQITAAGKVPPAKVMVIGAGVAGLAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECEEEECCCCCCCEEEEEECCHHHHHH IGAAGSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFEEEAGSGDGYAKVMSEAFIKAEME HCCCCHHHHHHHHHCCCHHHHHHHHHCCCHHHEECCHHCCCCCCHHHHHHHHHHHHHHHH LFAAQAAEVDIIVTTALIPGRPAPRLITKEMVASMKSGSVIVDLAAQTGGNCELTVADEV HHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCE TITENGVKIIGYTDLPSRLPTQSSQLYGTNLVNLLKLLCKEKNGEIDIDFDDTVIRGVTV EEECCCEEEEEECCCCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCEEECCCCHHHCCEEE VKTGEVTWPAPPIQVSAQPQAAKAAPIAKEETKPSSPWTKYIIMAVAIVLFGWLANVAPP EEECCEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCH EFLSHFTVFALACVVGYYVVWNVSHALHTPLMSVTNAISGIIVVGALLQIGHGGWVSFFS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH FIAVLIASINIFGGFTVTQRMLKMFRKN HHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3525165; 1633824; 9097039; 9278503; 1932078 [H]