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The map label for this gene is ycaO [H]

Identifier: 218928533

GI number: 218928533

Start: 1561947

End: 1563713

Strand: Reverse

Name: ycaO [H]

Synonym: YPO1385

Alternate gene names: 218928533

Gene position: 1563713-1561947 (Counterclockwise)

Preceding gene: 218928545

Following gene: 218928532

Centisome position: 33.6

GC content: 49.52

Gene sequence:

>1767_bases
ATGACGCAAACTTTTATTCCCGGCAAAGACGCTGCGCTGGAAGACTCTATCTCCCGTTTTCAGCAAAAACTGAGCGACCT
CGGTTTTAATATTGAAGAAGCCTCTTGGCTTAACCCTGTTCCTCACGTTTGGTCGGTACATATCCGCGACCGCGACTGCC
CGTTGTGCTTTACCAACGGCAAAGGCGCCAGTAAAAAAGCGGCTCTGGCATCAGCTCTGGGCGAATATTTTGAGCGTTTA
TCCACCAACTATTTCTTTGCTGACTTCTATCTGGGCAAAGCCATCGCTGAGGGTGATTTCGTTCATTACCCAAACGAGAA
GTGGTTTCCGATCCCGGCGGATAATCTGCTACCGGAAGGCATTCTGGATGAGCGTCTGCTGGCGTTTTACGACCCAGAGC
AAGAGTTGGTCGCCAGTGATTTGGTTGATTTGCAGTCGGGTAATGCCAAGCGTGGTATCTGTTCACTGCCCTTTACTCGT
CAATCAGATTTAGAAACTGTCTATATCCCGATGAATATTATCGGCAATCTGTATGTTTCAAACGGTATGTCAGCAGGGAA
TACCGCTAACGAAGCCCGCGTACAGGCACTGTCTGAAGTTTTTGAGCGTTATGTGAAAAACCGCATTATTGCGGAGTCCA
TCAGCTTGCCAGAGATCCCCGCCGAGGTATTGAATCGCTATCCAGGCGTGGTAGAAGCTATCACTAAGCTGGAAGAAGAA
GGTTTCCCTATCCTGTCTTACGACGCCTCTCTGGGGGGCGCTTATCCGGTTATCTGTGTCGTGCTATTTAACCCGTCAAA
CGGTACCTGTTTCGCGTCATTCGGCGCACATCCCGATTTTGGTGTGGCATTAGAACGCACGGTGACGGAGTTATTACAGG
GCCGCAGTCTGAAAGATCTTGATGTCTTTACTGCACCAACCTTTGATGACGAAGAAGTGGCAGAACATACCAACCTGGAA
ACCCACTTTATCGATTCAAGCGGTCTAATTAGTTGGGATATGTTTAAGCAGGATGCAGATTACCCATTTGTTGACTGGAG
CTTCAAGGGCACCACAGAAGAAGAGTTCGCGACATTGATGGCTATCTTCCAACAAGAAGGTGCCGAAGTGTACATCGCAG
ATTATGAGCACTTAGGTGTCTACGCCTGCCGGATCTTGGTGCCGGGGATGTCTGATATCTACCCTGCCGAAGACTTGCTG
ATGGCGAACAACACCATGGGTGTACATCTGCGTGATACTTTACTGGCCTTGCCAGATACAGACTGGCAGCCAGCACAGTA
CTTGGAATTGATTCAGCAGATTGATGATGAAGGCTTGGATGATTTTGCCCGTGTGCGTGAACTGCTGGGTATCGCCTCCG
GTAAAGATAATGGCTGGTACACCCTGCGGGTTGGCGAACTGAAATCAATGCTGGCACTGGCGGGCGGTGATCTCGAGCAA
GCGCTGATCTGGGTTGAATGGACACAAGACTTTAACGCTTCCGTCTTTACAGCAAAACAGGCCAACTATTACCGTTGCCT
GCAAACGCTACTGCTCTTGAACCAAGAGCCTGATCGTGACCCGATGCAATATTACAATGCATTCGTCAAGATGTATGGTC
AGGAAGCGGTCGATATTGCCTCAGCGGCCTTATCGGGTGAAATTCGCTTCAACGGCCTGTTCAGTGTTGACGAAGATCTG
AAAGCATTACCCGCTCATCAGGCTTTACTCGGCGCTTATGCTAAGTTGCAGGCGGCTAAACGTCGCCATTGGGCTAAAAG
CGAGTAA

Upstream 100 bases:

>100_bases
ATGAAAACTGTGATATCTACTGTGCTTTCAGAATACATGGAGCTATTAACCAAAACCCCGTATGATTGCCCGCTTTTAGT
ACCGCCAAAAAGTGAAGACA

Downstream 100 bases:

>100_bases
TACGGCTCTTCCTTACCGCTCCGCCAAGTTATTGAGTTTGTAGCCTGGCGACAAACGTGCGTATCCCGAATCACTGCCCC
GCGTCAGTGATTCGGGCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 588; Mature: 587

Protein sequence:

>588_residues
MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERL
STNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTR
QSDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKLEEE
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLE
THFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLL
MANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
ALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVDEDL
KALPAHQALLGAYAKLQAAKRRHWAKSE

Sequences:

>Translated_588_residues
MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERL
STNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTR
QSDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKLEEE
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLE
THFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLL
MANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
ALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVDEDL
KALPAHQALLGAYAKLQAAKRRHWAKSE
>Mature_587_residues
TQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNGKGASKKAALASALGEYFERLS
TNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEGILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTRQ
SDLETVYIPMNIIGNLYVSNGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKLEEEG
FPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDLDVFTAPTFDDEEVAEHTNLET
HFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLMAIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLM
ANNTMGVHLRDTLLALPDTDWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQA
LIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIASAALSGEIRFNGLFSVDEDLK
ALPAHQALLGAYAKLQAAKRRHWAKSE

Specific function: Unknown

COG id: COG1944

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0142 family [H]

Homologues:

Organism=Escherichia coli, GI87081799, Length=586, Percent_Identity=80.2047781569966, Blast_Score=977, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003776 [H]

Pfam domain/function: PF02624 YcaO [H]

EC number: NA

Molecular weight: Translated: 65706; Mature: 65574

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECC
KGASKKAALASALGEYFERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEG
CCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCHHCCCCC
ILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTRQSDLETVYIPMNIIGNLYVS
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHEE
NGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHC
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCCEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLM
EEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCHHHHHHHH
AIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGVHLRDTLLALPDT
HHHHHCCCEEEEEECHHHHHEEEEEECCCCCCCCCCHHHEEECCCCEEEEEHHEEECCCC
DWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCHHH
ALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIA
EEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHH
SAALSGEIRFNGLFSVDEDLKALPAHQALLGAYAKLQAAKRRHWAKSE
HHHHCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECC
KGASKKAALASALGEYFERLSTNYFFADFYLGKAIAEGDFVHYPNEKWFPIPADNLLPEG
CCCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCCCEEECCCCCCCCCCCHHCCCCC
ILDERLLAFYDPEQELVASDLVDLQSGNAKRGICSLPFTRQSDLETVYIPMNIIGNLYVS
HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCEEEEEHHHHHHHHEE
NGMSAGNTANEARVQALSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAITKLEEE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHC
GFPILSYDASLGGAYPVICVVLFNPSNGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
CCCEEEECCCCCCCCEEEEEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCC
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFKGTTEEEFATLM
EEEECCCCCHHHHHHHCCCCEEEECCCCCEEHHHHHCCCCCCEEEEEECCCCHHHHHHHH
AIFQQEGAEVYIADYEHLGVYACRILVPGMSDIYPAEDLLMANNTMGVHLRDTLLALPDT
HHHHHCCCEEEEEECHHHHHEEEEEECCCCCCCCCCHHHEEECCCCEEEEEHHEEECCCC
DWQPAQYLELIQQIDDEGLDDFARVRELLGIASGKDNGWYTLRVGELKSMLALAGGDLEQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCHHH
ALIWVEWTQDFNASVFTAKQANYYRCLQTLLLLNQEPDRDPMQYYNAFVKMYGQEAVDIA
EEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCHHHHHHH
SAALSGEIRFNGLFSVDEDLKALPAHQALLGAYAKLQAAKRRHWAKSE
HHHHCCCEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]