| Definition | Yersinia pestis CO92 chromosome, complete genome. |
|---|---|
| Accession | NC_003143 |
| Length | 4,653,728 |
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The map label for this gene is gpmI [H]
Identifier: 218927283
GI number: 218927283
Start: 74909
End: 76456
Strand: Reverse
Name: gpmI [H]
Synonym: YPO0064
Alternate gene names: 218927283
Gene position: 76456-74909 (Counterclockwise)
Preceding gene: 218927290
Following gene: 218927282
Centisome position: 1.64
GC content: 50.13
Gene sequence:
>1548_bases ATGTCGAGCACGAAAAAACCACTGGTCCTGACGATTCTTGATGGTTACGGTCACCGTGAAGAACAGCAGGATAATGCTAT TTTGAATGCCAAAACCCCGGTAATGGACGTGTTATGGCAGCAACAGCCTCACACATTGATCGCCGCGTCGGGTCTGGATG TAGGCCTGCCTGATGGGCAAATGGGTAACTCTGAAGTCGGTCACGTCAATCTGGGTGCTGGGCGCATTGTTTATCAGGAT CTGACCCGCCTCGACAAAGAGATCAAAGAGGGTGACTTCTTCACGAATCCAACCCTGACGGCTGCCGTTGATAACGCGGT TAAAACGGGTAAGGCCGTTCATATCATGGGGTTGTTATCTGCCGGTGGTGTACACAGCCATGAAGACCATATTATGGCGA TGGTTGAGCTGGCGGCTAAACGCGGTGCAACCGCTATTTATCTGCATGCCTTCCTCGATGGACGTGATACCCCACCACGC AGTGCCGAGTCATCACTGAAACGATTCACAGCCAAGTTTGCTGAACTGGGTAATGGCCGTATCGCGTCGATTATTGGCCG TTACTATGCCATGGACCGTGATAATCGTTGGGATCGCGTGCAACTGGCATACGATTTACTGACTCAAGCGAAAGGCGAAT TTACTGCAGATAACGCAGTTGCGGGCCTGCAAGCGGCCTATGCCCGTGGTGAAAATGATGAGTTTGTTAAACCAACCGTG ATTCAAGCAACTGGCGAAGCCGATGCGGCCATGAACGAGGGTGATACATTAATCTTTATGAATTTCCGTGCTGACCGCGC CCGCCAAATTACCCGCACCTTTGTTAATGCCGAGTTTGACGGTTTCAAGCGAGATAAAGTGGTTAACTTCGGCGATTTCA TCATGCTAACCGAATATGCCGCGGATATTAAAGTCGCCTGTGCTTATCCACCCGCCTCACTGACAAACACTTTCGGTGAA TGGTTGATGAAGCATGATAAAACCCAGTTACGCATTTCCGAAACTGAAAAATATGCTCACGTCACCTTCTTCTATAACGG CGGCGTTGAAGAGCCATTTAAAGGTGAAGACCGCATTCTGATCAACTCGCCTAAAGTAGCCACCTATGACCTGCAACCCG AGATGAGTTCAGCAGAACTGACGGAAAAACTGGTCAGCGCCATCGGTAGCGGCAAATATGATGTGATCATTTGTAACTAT CCGAACGGCGACATGGTCGGTCATACCGGTGATTACGATGCGGCAGTGAAAGCGGTTGAAACACTGGATAACTGCATCGA ACAAGTGGTTGCAGCAGTGAAAGCAGCCGATGGTCAATTGTTGATCACCGCTGACCACGGCAACGCTGAGCAAATGCGTG ACCCGGCAACTGGCCAGGCACACACCGCCCATACCAGCCTGCCAGTGCCCCTGATTTACGTAGGTAACAAAGCCGTTAAA GCTGTTGAAGGTGGCAAGCTTTCTGATATCGCACCAACCATGTTGTCACTGATGGAAATGGAAATCCCACAAGAGATGAC TGGTAAGCCGCTGTTCATCGTGGAATAA
Upstream 100 bases:
>100_bases GGATACCGAGTGTACATAGCCGCGCATATCATTCTCCCTCCTTTACAGGGTGATGTTCGCTGCTATTTAACACTTGGACT TATAAGAAAGAGGTTATGCA
Downstream 100 bases:
>100_bases TCCTTCGTTATGAAGGATAGAGAGTTATTGGCGAAATCAATAACTACGAAAGATGCCGTCTCTGACGGTAGAGAGTCTCC CTCTCTGCTGTCAGATAAGT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MSSTKKPLVLTILDGYGHREEQQDNAILNAKTPVMDVLWQQQPHTLIAASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQD LTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPR SAESSLKRFTAKFAELGNGRIASIIGRYYAMDRDNRWDRVQLAYDLLTQAKGEFTADNAVAGLQAAYARGENDEFVKPTV IQATGEADAAMNEGDTLIFMNFRADRARQITRTFVNAEFDGFKRDKVVNFGDFIMLTEYAADIKVACAYPPASLTNTFGE WLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRILINSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNY PNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQMRDPATGQAHTAHTSLPVPLIYVGNKAVK AVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFIVE
Sequences:
>Translated_515_residues MSSTKKPLVLTILDGYGHREEQQDNAILNAKTPVMDVLWQQQPHTLIAASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQD LTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPR SAESSLKRFTAKFAELGNGRIASIIGRYYAMDRDNRWDRVQLAYDLLTQAKGEFTADNAVAGLQAAYARGENDEFVKPTV IQATGEADAAMNEGDTLIFMNFRADRARQITRTFVNAEFDGFKRDKVVNFGDFIMLTEYAADIKVACAYPPASLTNTFGE WLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRILINSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNY PNGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQMRDPATGQAHTAHTSLPVPLIYVGNKAVK AVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFIVE >Mature_514_residues SSTKKPLVLTILDGYGHREEQQDNAILNAKTPVMDVLWQQQPHTLIAASGLDVGLPDGQMGNSEVGHVNLGAGRIVYQDL TRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLSAGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRS AESSLKRFTAKFAELGNGRIASIIGRYYAMDRDNRWDRVQLAYDLLTQAKGEFTADNAVAGLQAAYARGENDEFVKPTVI QATGEADAAMNEGDTLIFMNFRADRARQITRTFVNAEFDGFKRDKVVNFGDFIMLTEYAADIKVACAYPPASLTNTFGEW LMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRILINSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYP NGDMVGHTGDYDAAVKAVETLDNCIEQVVAAVKAADGQLLITADHGNAEQMRDPATGQAHTAHTSLPVPLIYVGNKAVKA VEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFIVE
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=515, Percent_Identity=83.3009708737864, Blast_Score=887, Evalue=0.0, Organism=Caenorhabditis elegans, GI17507741, Length=525, Percent_Identity=45.5238095238095, Blast_Score=430, Evalue=1e-121, Organism=Caenorhabditis elegans, GI32564249, Length=525, Percent_Identity=45.5238095238095, Blast_Score=430, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56168; Mature: 56037
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTKKPLVLTILDGYGHREEQQDNAILNAKTPVMDVLWQQQPHTLIAASGLDVGLPDGQ CCCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECC AGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAELGNGR CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCH IASIIGRYYAMDRDNRWDRVQLAYDLLTQAKGEFTADNAVAGLQAAYARGENDEFVKPTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE IQATGEADAAMNEGDTLIFMNFRADRARQITRTFVNAEFDGFKRDKVVNFGDFIMLTEYA EEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEC ADIKVACAYPPASLTNTFGEWLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRIL CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEE INSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVE EECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH TLDNCIEQVVAAVKAADGQLLITADHGNAEQMRDPATGQAHTAHTSLPVPLIYVGNKAVK HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEE AVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFIVE EECCCCCCHHHHHHHHHHHHHCCHHHCCCEEEEEC >Mature Secondary Structure SSTKKPLVLTILDGYGHREEQQDNAILNAKTPVMDVLWQQQPHTLIAASGLDVGLPDGQ CCCCCCEEEEEECCCCCCCCCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCCCCCC MGNSEVGHVNLGAGRIVYQDLTRLDKEIKEGDFFTNPTLTAAVDNAVKTGKAVHIMGLLS CCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEEEECC AGGVHSHEDHIMAMVELAAKRGATAIYLHAFLDGRDTPPRSAESSLKRFTAKFAELGNGR CCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCH IASIIGRYYAMDRDNRWDRVQLAYDLLTQAKGEFTADNAVAGLQAAYARGENDEFVKPTV HHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE IQATGEADAAMNEGDTLIFMNFRADRARQITRTFVNAEFDGFKRDKVVNFGDFIMLTEYA EEECCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEEEEC ADIKVACAYPPASLTNTFGEWLMKHDKTQLRISETEKYAHVTFFYNGGVEEPFKGEDRIL CCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCEEE INSPKVATYDLQPEMSSAELTEKLVSAIGSGKYDVIICNYPNGDMVGHTGDYDAAVKAVE EECCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHH TLDNCIEQVVAAVKAADGQLLITADHGNAEQMRDPATGQAHTAHTSLPVPLIYVGNKAVK HHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEE AVEGGKLSDIAPTMLSLMEMEIPQEMTGKPLFIVE EECCCCCCHHHHHHHHHHHHHCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA