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The map label for this gene is yibP [H]

Identifier: 218927282

GI number: 218927282

Start: 73529

End: 74881

Strand: Reverse

Name: yibP [H]

Synonym: YPO0063

Alternate gene names: 218927282

Gene position: 74881-73529 (Counterclockwise)

Preceding gene: 218927283

Following gene: 218927279

Centisome position: 1.61

GC content: 50.26

Gene sequence:

>1353_bases
TTGGCGAAATCAATAACTACGAAAGATGCCGTCTCTGACGGTAGAGAGTCTCCCTCTCTGCTGTCAGATAAGTTGAGTCG
TCTACCGTGGTCAACACTCTATGCCAGCGTTTTTTGTGCTGGCGTACTGTTATTGCCATTTTCTGGTCAGGCTGTCGAAC
CCCCTGTCGCGGCCAAAGCATCAGAGAATAAAAACCAACTCAAAACCCTCCAACAGGATATCGCTGAAAAAGAAAAAAGT
GTTCAGCAACAAAAAAAACAACGCAGTTCATTGCTGGATCAACTAAAACAGCAAGAAAATACAATTTCTCAGACCAGCCG
CAGCCTGCGCGAGACCCAAGCGGCCCTGGCTGAACTGAGTAAAGATATTGCCAGCCTCACGACCTCGATTGAAAAACTGC
AAAATCAGCAGTCGCAACAGCAAAGTATTCTGTCTAAACAACTTGCAGCGGCGTTTAAACAAGGCAAACACAGTAGCTTA
CAACTTATTTTAAGTGGCGAAGAGAGCCAGCGCAGTGAGCGTATTTTGGCTTATTTCAGTTACCTGAATGAAGCTCGGCA
AAAAGCCATTGAAGAGTTGAAGCAGACACGTACCACGCTGTCTGCAGAGAAAAAAATGCTGGAGCAAAAACAGAATCAAC
ACAAGGCATTGCTGGATGAACAGAAAGCGCAACAACAGAAGCTGGAACAAGCGCGTATTGCCCGCCAAAAAACCCTGACA
TCGCTGGAAGCCTCGCTGGAGAAAGATCAGCAGAGTTTGGCGGAGTTAAAGTTGAACGAAAGCCGTTTACGTGACCAAAT
CGCCAAAGCAGAACGGGAAGCCAAAGCTCGGGCTGAACGGGAGGCCAAAGAAGCGGCCCGTGTGCGTGAACAGGTAAAAG
TCAAAGAGCAGCAAGCGAAGAAGACCGGTAGCAGTTATAAACCAAGTGAAAGTGAGCGCTCATTGATGGCGCGCACCGGC
GGCTTGGGCCGTCCTGGCGGTCAAGCCCTATGGCCCGTTCGTGGTAACGTGTCCCACCGTTTCGGTGAACCCCTACAAGG
TGAACTACGCTGGAAAGGGATGGTTATCACCGCACCTGAAGGCAGCGAAGTCAAAGCCATCGCCGATGGCCGTGTTTTAC
TGGCTGACTGGTTACAAGGTTATGGCTTGGTGGTCGTTATCGAGCATGGGAAAGGGGATATGAGTTTGTATGGCTACAAC
CAAAGTGCCTTGGTCAATGTTGGCGCTCAGGTTAAAGCGGGCCAGCCTATCGCACTTGTGGGTACCAGCGGTGGGCAGGG
CGAGCCATCGCTCTATTTCGAAATCCGCCGTCAGGGACAAGCCGTTAACCCACAGCCCTGGTTAGGAAGATAG

Upstream 100 bases:

>100_bases
AACCATGTTGTCACTGATGGAAATGGAAATCCCACAAGAGATGACTGGTAAGCCGCTGTTCATCGTGGAATAATCCTTCG
TTATGAAGGATAGAGAGTTA

Downstream 100 bases:

>100_bases
GGAACAACGTTAGGGAACTCGTATTGCGCTACTTCAACACACGCCAATTTATCATCGTAAGCACGCTATTCATCGCCAGC
ACAGCACAGGCCGGCAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDIAEKEKS
VQQQKKQRSSLLDQLKQQENTISQTSRSLRETQAALAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSL
QLILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIARQKTLT
SLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERSLMARTG
GLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYN
QSALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR

Sequences:

>Translated_450_residues
MAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDIAEKEKS
VQQQKKQRSSLLDQLKQQENTISQTSRSLRETQAALAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSL
QLILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIARQKTLT
SLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERSLMARTG
GLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYN
QSALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
>Mature_449_residues
AKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKASENKNQLKTLQQDIAEKEKSV
QQQKKQRSSLLDQLKQQENTISQTSRSLRETQAALAELSKDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSLQ
LILSGEESQRSERILAYFSYLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIARQKTLTS
LEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAKKTGSSYKPSESERSLMARTGG
LGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPEGSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQ
SALVNVGAQVKAGQPIALVGTSGGQGEPSLYFEIRRQGQAVNPQPWLGR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=418, Percent_Identity=63.1578947368421, Blast_Score=495, Evalue=1e-141,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=40.3361344537815, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI87082174, Length=120, Percent_Identity=35, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI87081989, Length=163, Percent_Identity=28.8343558282209, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 49764; Mature: 49633

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKA
CCCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SENKNQLKTLQQDIAEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQAALAELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSLQLILSGEESQRSERILAYFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
YLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIARQKTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGSSYKPSESERSLMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPE
HCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHCCCCCCCCEEECEEEEECCC
GSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAGQPIALV
CCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHEECCCEEECCCCEEEE
GTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
ECCCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
AKSITTKDAVSDGRESPSLLSDKLSRLPWSTLYASVFCAGVLLLPFSGQAVEPPVAAKA
CCCCCCHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SENKNQLKTLQQDIAEKEKSVQQQKKQRSSLLDQLKQQENTISQTSRSLRETQAALAELS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDIASLTTSIEKLQNQQSQQQSILSKQLAAAFKQGKHSSLQLILSGEESQRSERILAYFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH
YLNEARQKAIEELKQTRTTLSAEKKMLEQKQNQHKALLDEQKAQQQKLEQARIARQKTLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLEASLEKDQQSLAELKLNESRLRDQIAKAEREAKARAEREAKEAARVREQVKVKEQQAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTGSSYKPSESERSLMARTGGLGRPGGQALWPVRGNVSHRFGEPLQGELRWKGMVITAPE
HCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHCCCCCCCCEEECEEEEECCC
GSEVKAIADGRVLLADWLQGYGLVVVIEHGKGDMSLYGYNQSALVNVGAQVKAGQPIALV
CCCEEEECCCCCHHHHHHCCCCEEEEEECCCCCEEEEECCCHHHEECCCEEECCCCEEEE
GTSGGQGEPSLYFEIRRQGQAVNPQPWLGR
ECCCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]