Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884541

Identifier: 218884541

GI number: 218884541

Start: 1150554

End: 1151207

Strand: Reverse

Name: 218884541

Synonym: DKAM_1230

Alternate gene names: NA

Gene position: 1151207-1150554 (Counterclockwise)

Preceding gene: 218884542

Following gene: 218884538

Centisome position: 84.32

GC content: 46.02

Gene sequence:

>654_bases
ATGCCTAGGATATTCTCGGGTTCAATACTAATAGAGCCAACAGCTCTATCACTATCTAAACACATAGATCTCCTAAAGTT
TCTAAGAGGTTTCATTAACGAGATAGGAGTACTCCACAGGCCTGGAGCAATTGACACCCGTGTATCCGGGGACATGCTTA
CCATAGCACTATCCCCCTACACAGAGATTGTTGATTCCAGAAACATTGAAGAACTCGAGGGATTACTGGAATACGTTAGG
AGAGAAATAGGCAGAGTATATATAGCTGAAAGAGATACCTGGCTCGACTTCACCAGTATACCGGTCGACGACCTCCTGGA
CTTGTTAAACACGGTTAAGAACAGGGGTAGTGGATGCATCGGTTCTACATGTTATGTTATCGATGACGCAAGCGTGGAAT
GTAGGAGGATCATGATAGTTGATGAAAGACTAGTCTACTTAGCTGGATTACATGGCCACATCTTCACAGACTTCAAGGTC
GAGCCCCCAGGTAGTAGCATATTCAACTATATGTATTGTGAGACAGACAGTGGACACCACTCACTCATATCGGGAACCAG
GGATGCGGGGGTTGTATCCCTTAGCGTTAAAGTGCCCCCGGGTCTAGACGACCTTATCCAATGGGCATTACTGGGGCTGG
TCTACCTCCAGTAA

Upstream 100 bases:

>100_bases
TCAGTATCATTGAGATAAAGATAAAGGTAAAGGAGTAAACACTGTATTTTTACAGTTTTTCCCAACTCATTAACCATTCA
CCAGAAGCCGGCTGTAGGAG

Downstream 100 bases:

>100_bases
TAGATGTCTAGCATTAACCAGGGATTAAATGAGCTCGCTAACTAAGTATGGTAAGGATTCACTCATAGTCCTTGGCGTCG
AATAACTCGTCGAGACCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 216

Protein sequence:

>217_residues
MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVR
REIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKV
EPPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ

Sequences:

>Translated_217_residues
MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVR
REIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKV
EPPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ
>Mature_216_residues
PRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVRR
EIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVE
PPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24155; Mature: 24024

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPY
CCCEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCH
TEIVDSRNIEELEGLLEYVRREIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCI
HHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCC
GSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVEPPGSSIFNYMYCETDSGHH
CCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCH
SLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ
HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPY
CCEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCH
TEIVDSRNIEELEGLLEYVRREIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCI
HHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCC
GSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVEPPGSSIFNYMYCETDSGHH
CCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCH
SLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ
HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA