| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884541
Identifier: 218884541
GI number: 218884541
Start: 1150554
End: 1151207
Strand: Reverse
Name: 218884541
Synonym: DKAM_1230
Alternate gene names: NA
Gene position: 1151207-1150554 (Counterclockwise)
Preceding gene: 218884542
Following gene: 218884538
Centisome position: 84.32
GC content: 46.02
Gene sequence:
>654_bases ATGCCTAGGATATTCTCGGGTTCAATACTAATAGAGCCAACAGCTCTATCACTATCTAAACACATAGATCTCCTAAAGTT TCTAAGAGGTTTCATTAACGAGATAGGAGTACTCCACAGGCCTGGAGCAATTGACACCCGTGTATCCGGGGACATGCTTA CCATAGCACTATCCCCCTACACAGAGATTGTTGATTCCAGAAACATTGAAGAACTCGAGGGATTACTGGAATACGTTAGG AGAGAAATAGGCAGAGTATATATAGCTGAAAGAGATACCTGGCTCGACTTCACCAGTATACCGGTCGACGACCTCCTGGA CTTGTTAAACACGGTTAAGAACAGGGGTAGTGGATGCATCGGTTCTACATGTTATGTTATCGATGACGCAAGCGTGGAAT GTAGGAGGATCATGATAGTTGATGAAAGACTAGTCTACTTAGCTGGATTACATGGCCACATCTTCACAGACTTCAAGGTC GAGCCCCCAGGTAGTAGCATATTCAACTATATGTATTGTGAGACAGACAGTGGACACCACTCACTCATATCGGGAACCAG GGATGCGGGGGTTGTATCCCTTAGCGTTAAAGTGCCCCCGGGTCTAGACGACCTTATCCAATGGGCATTACTGGGGCTGG TCTACCTCCAGTAA
Upstream 100 bases:
>100_bases TCAGTATCATTGAGATAAAGATAAAGGTAAAGGAGTAAACACTGTATTTTTACAGTTTTTCCCAACTCATTAACCATTCA CCAGAAGCCGGCTGTAGGAG
Downstream 100 bases:
>100_bases TAGATGTCTAGCATTAACCAGGGATTAAATGAGCTCGCTAACTAAGTATGGTAAGGATTCACTCATAGTCCTTGGCGTCG AATAACTCGTCGAGACCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVR REIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKV EPPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ
Sequences:
>Translated_217_residues MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVR REIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKV EPPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ >Mature_216_residues PRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPYTEIVDSRNIEELEGLLEYVRR EIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCIGSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVE PPGSSIFNYMYCETDSGHHSLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24155; Mature: 24024
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPY CCCEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCH TEIVDSRNIEELEGLLEYVRREIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCI HHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCC GSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVEPPGSSIFNYMYCETDSGHH CCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCH SLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PRIFSGSILIEPTALSLSKHIDLLKFLRGFINEIGVLHRPGAIDTRVSGDMLTIALSPY CCEECCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEECCH TEIVDSRNIEELEGLLEYVRREIGRVYIAERDTWLDFTSIPVDDLLDLLNTVKNRGSGCI HHHHCCCCHHHHHHHHHHHHHHHCEEEEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCC GSTCYVIDDASVECRRIMIVDERLVYLAGLHGHIFTDFKVEPPGSSIFNYMYCETDSGHH CCEEEEEECCCCCEEEEEEECCCEEEEECCCCCEEEEEEECCCCCCCEEEEEEECCCCCH SLISGTRDAGVVSLSVKVPPGLDDLIQWALLGLVYLQ HHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA