| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884489
Identifier: 218884489
GI number: 218884489
Start: 1097598
End: 1098428
Strand: Reverse
Name: 218884489
Synonym: DKAM_1178
Alternate gene names: NA
Gene position: 1098428-1097598 (Counterclockwise)
Preceding gene: 218884490
Following gene: 218884488
Centisome position: 80.46
GC content: 46.93
Gene sequence:
>831_bases GTGGCCAGGATAGGTTTAAGCATCGTTCTACCTACAAGCATCCTCTCGGTGGAGCCCACCCTGTTTTTAAAGTCCCTCAG GATACACCAGGTTGCTCGTTGGTCCTCTATATTCGGTGTTAACAGAGTGGTGTTTTACCGTGAATATGAGACATCTCGAG ACGAGTTCCGTGAGCATAGAGAGATCATAAGTATTCACTGGAGATACTTCTTCACACCCCCATACTTGAGGAGAAGGCTT GTTCCACGCAACCCCTTACTCCGCTACGTGGGGGCTCTGCCCCCTATAAGGCTCTCAGAGTTCAATGTATCAGGTAAACC GGTTGATGGGGAGGAGAGAATAGGGTTTATTACTCTTGAGGAGGGCAAGCTTACCGCCTACTTGGATAACGTTGAGAAAT ATAGCTTAGTGAATCCAGGTGACTGTAAACAGGGGTTTTCAAGGGTCAAAGTTGTCGATTCCAGGAGGAAGCTTGCTGAG TGTATTGATACAGAGTACTATATTGGTCCATCACTAGTATTCAGGAACTCACTTAGAGAGGCCCTGGATGAGGCTGGTGA GAAAGTATTCATAATTGCAACAGATAAGACTGGGGAGGCACCCTCGTTGAGTAACCTCGCCTCTCTCAAGGGGAGGATGG AGTTGATGCTGTTATTCGGGAGTCCTGAGCGCGATTTATTCGAGATATCACGGGGTGAAGGATTCAACCTATTAGAGTAT GTTGACGCAGTGTGGAATACTGTACCGGGTCAGCATGTTGTATCCGTTAGAACCGAGGAGGCAGTTATAATAACCCTTGG ACTCCTAAATTACTGGTTGAAAAAAGAGTAG
Upstream 100 bases:
>100_bases GAGGGTGATTTAGATGGGTGGACGGCAGAAAACAACTATTTTCATGATTAAGGAAAGGAGGAGGGAGTCCCAGAGTAGTC AGAAGAAAGGGTAGGGTTGA
Downstream 100 bases:
>100_bases TGTATATAAGTGCTCATACATTATCTAACACTATGCTTTTAAAACCTGTTTACCTATAGAAGCCTTGAAGGTGTTTAGGG ATGGGTCATAGGAAGCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRL VPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAE CIDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE
Sequences:
>Translated_276_residues MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRL VPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAE CIDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE >Mature_275_residues ARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRLV PRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAEC IDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEYV DAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE
Specific function: Unknown
COG id: COG2106
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003750 [H]
Pfam domain/function: PF02598 DUF171 [H]
EC number: NA
Molecular weight: Translated: 31675; Mature: 31544
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHR CCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH EIISIHWRYFFTPPYLRRRLVPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLE HEEEEEEEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEE EGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAECIDTEYYIGPSLVFRNSLRE CCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHH ALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY HHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHEECCCCCCCHHHH VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE HHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHCCC >Mature Secondary Structure ARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHR CCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH EIISIHWRYFFTPPYLRRRLVPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLE HEEEEEEEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEE EGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAECIDTEYYIGPSLVFRNSLRE CCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHH ALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY HHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHEECCCCCCCHHHH VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE HHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8241282; 11016950 [H]