Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884489

Identifier: 218884489

GI number: 218884489

Start: 1097598

End: 1098428

Strand: Reverse

Name: 218884489

Synonym: DKAM_1178

Alternate gene names: NA

Gene position: 1098428-1097598 (Counterclockwise)

Preceding gene: 218884490

Following gene: 218884488

Centisome position: 80.46

GC content: 46.93

Gene sequence:

>831_bases
GTGGCCAGGATAGGTTTAAGCATCGTTCTACCTACAAGCATCCTCTCGGTGGAGCCCACCCTGTTTTTAAAGTCCCTCAG
GATACACCAGGTTGCTCGTTGGTCCTCTATATTCGGTGTTAACAGAGTGGTGTTTTACCGTGAATATGAGACATCTCGAG
ACGAGTTCCGTGAGCATAGAGAGATCATAAGTATTCACTGGAGATACTTCTTCACACCCCCATACTTGAGGAGAAGGCTT
GTTCCACGCAACCCCTTACTCCGCTACGTGGGGGCTCTGCCCCCTATAAGGCTCTCAGAGTTCAATGTATCAGGTAAACC
GGTTGATGGGGAGGAGAGAATAGGGTTTATTACTCTTGAGGAGGGCAAGCTTACCGCCTACTTGGATAACGTTGAGAAAT
ATAGCTTAGTGAATCCAGGTGACTGTAAACAGGGGTTTTCAAGGGTCAAAGTTGTCGATTCCAGGAGGAAGCTTGCTGAG
TGTATTGATACAGAGTACTATATTGGTCCATCACTAGTATTCAGGAACTCACTTAGAGAGGCCCTGGATGAGGCTGGTGA
GAAAGTATTCATAATTGCAACAGATAAGACTGGGGAGGCACCCTCGTTGAGTAACCTCGCCTCTCTCAAGGGGAGGATGG
AGTTGATGCTGTTATTCGGGAGTCCTGAGCGCGATTTATTCGAGATATCACGGGGTGAAGGATTCAACCTATTAGAGTAT
GTTGACGCAGTGTGGAATACTGTACCGGGTCAGCATGTTGTATCCGTTAGAACCGAGGAGGCAGTTATAATAACCCTTGG
ACTCCTAAATTACTGGTTGAAAAAAGAGTAG

Upstream 100 bases:

>100_bases
GAGGGTGATTTAGATGGGTGGACGGCAGAAAACAACTATTTTCATGATTAAGGAAAGGAGGAGGGAGTCCCAGAGTAGTC
AGAAGAAAGGGTAGGGTTGA

Downstream 100 bases:

>100_bases
TGTATATAAGTGCTCATACATTATCTAACACTATGCTTTTAAAACCTGTTTACCTATAGAAGCCTTGAAGGTGTTTAGGG
ATGGGTCATAGGAAGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRL
VPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAE
CIDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY
VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE

Sequences:

>Translated_276_residues
MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRL
VPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAE
CIDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY
VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE
>Mature_275_residues
ARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHREIISIHWRYFFTPPYLRRRLV
PRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLEEGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAEC
IDTEYYIGPSLVFRNSLREALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEYV
DAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE

Specific function: Unknown

COG id: COG2106

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003750 [H]

Pfam domain/function: PF02598 DUF171 [H]

EC number: NA

Molecular weight: Translated: 31675; Mature: 31544

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHR
CCCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
EIISIHWRYFFTPPYLRRRLVPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLE
HEEEEEEEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEE
EGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAECIDTEYYIGPSLVFRNSLRE
CCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHH
ALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY
HHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHEECCCCCCCHHHH
VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE
HHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHCCC
>Mature Secondary Structure 
ARIGLSIVLPTSILSVEPTLFLKSLRIHQVARWSSIFGVNRVVFYREYETSRDEFREHR
CCCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHH
EIISIHWRYFFTPPYLRRRLVPRNPLLRYVGALPPIRLSEFNVSGKPVDGEERIGFITLE
HEEEEEEEEEECCHHHHHHCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCCCEEEEEEE
EGKLTAYLDNVEKYSLVNPGDCKQGFSRVKVVDSRRKLAECIDTEYYIGPSLVFRNSLRE
CCEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHH
ALDEAGEKVFIIATDKTGEAPSLSNLASLKGRMELMLLFGSPERDLFEISRGEGFNLLEY
HHHHCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHEECCCCCCCHHHH
VDAVWNTVPGQHVVSVRTEEAVIITLGLLNYWLKKE
HHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8241282; 11016950 [H]