| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884490
Identifier: 218884490
GI number: 218884490
Start: 1098581
End: 1100530
Strand: Reverse
Name: 218884490
Synonym: DKAM_1179
Alternate gene names: NA
Gene position: 1100530-1098581 (Counterclockwise)
Preceding gene: 218884491
Following gene: 218884489
Centisome position: 80.61
GC content: 47.44
Gene sequence:
>1950_bases ATGGTGAGGATCTGGCCTAAAACAGCGAAGATATACTGGGATCCATGGAGAAACATACCTGTTGTCAGGCCTAGGCAGGA AGAGTTGGATTTATACTATGCGGTAAGGCTCAGCGAGCCCGGTGACGCCAGGCCTGTCTTCCCCGGTGACCTGGAGAAGC TCAGGGGTGCCATACTATACGAGTATGGGAGCGATAAAGTATATACGAGGTTCTTCAACACTGGCTTTATGCTATTTAAT AAGGTCCCGCACTGGGACCTAATGTATGAGATAGTGTCATCGGGAAACGTTCTCGGCCAATTATATTATGATCCATTCAG AGAGAAATGGAGATTTAGGCTGACATACTCCGGAGCATACATTGCTAACGAGGAGGGATTAGTCGATAAAGCTGTGCTGG AGGGGCCGATCTACACTGGTAGGGAGGTTAAGCCAGCTCCGAGTACTAGTATGAGACAATTGATCATCGCAGACAAGAAG GGGAATATAAGGGGTCTTGGAGAGGTATACGGGGATAGTTTAATAGTTGTTAAGACGTTCCATGATACAACAATGCCCGT GGAGACCAGTGGTAAATCAGCCTCTCTCGAAGACGTGTTAAAGCATAATGAAGAGGGCTTGGAGGCTTTAGCTGGGAAAT CTATTTCATACCTGAAGAGGCTTAGAGGAAAGTATAGACTCCCAGTCTCAGTCTCATACTCCGGCGGTAAGGACAGCCTT GTCGCGCTTGACATAGCATACAAGGCTTTCGGAGAGCTTGAAATGGTTTTCAACGATACAGGGCTTGAACTACCTGAGAC AATAAAGAATGTGTATGAAGTCTCGGAGAAATATGGTGTGAGACTGCATATTGCATCAGCCGGAGATATATTTTGGAGAG CTGTAGCAGTCTTCGGTCCCCCCGGTAAAGACTATCGCTGGTGCTGTAAGGTCGCTAAGCTGGTTCCAATAGCCAGGTTA ACGAGGACTCTATGGCCTAACGGGGCTTTAAACATAGTGGGGCAGAGGGCTTTCGAGTCGCTTGACAGGGCGAAGAGCCC GAGGGTGTGGAGGAATAAGTGGATACCCCACTTAGTATCAACGTCGCCTATACAGGAGTGGAGCCAGCTGGAATGCTGGC TCTACATATTCAAGCATAGGCTACCATACAATAAACTCTACGAGCGTGGATTCGATAGGCTGGGATGCTTCCTATGCCCT TCAAGCGCTCTAGCCGAGTTCAAGGATGTCGAGAAGGAATATCCAGAGCTCTGGGGTAAATGGGGAATGATCCTGGAGGA GTGGCGTGTTAAGCTGAGTCAACCAGCTGAATGGGTGAAGCTGGGATTGTGGAGATGGCTTACACCGGCATCGGCTAAGA GGAGGATTGCTAGACATATTGAAAATTATAGTATGGACTGGAGGAGGGAGTATACTAATAGATTACTGGGGAGCAGTATA AATCTAGCGCCTCTTGAAATAGTGGAGTCGAATAATGAGTTGAAGATATTGTTTAACAGGGAGGTTCTAGCACCAAGCAT AAGGGAGGTTGTTAAGGTGAATATGGGTAGGCTGGGATACAGTGTGGAGGAGCAGGGAGACGTGTTCAGGGTTTCATCAG TGAACACGGTTATAACCGTCTCGGGGAGAAGCATTCATGTAAAACCGTCCATGAGTAGTGAGAACACAGAGGATCTTGTA GACCTCCTCAAGGTAATTTATAGGGCATATGGATGCGTTAAATGTGGGAGTTGCATACTCTGGATACCACCAGGCAATGC CATGCTTACACAAAATGGGCCAATACCTTTAAAGAACCTGGATGATAAAACCAGGAGGTTCTACCTGGAGGCATGCCCTA TAAGCGATCAACTAGTGGAGAAGACACTGGTACCACTCATACTTGGAACCCCTAAGGCGTTCAAGCGTAAGACTCGTAGA AGGATAATCACTAGTGAACACTATGGCTGA
Upstream 100 bases:
>100_bases CTTAATAAACGTTTCTGCCCCCATGCATCAACCTGGTTCAACTCAACCTAAATTAGGTTGATTGGATAGATGATAATCTA GGTAAGTCTAGTGATGCTGT
Downstream 100 bases:
>100_bases GAACGTATAGTTGTGAAGCATTATTATAAACCTCGGTAATGCTTAAACTGTAGAGGGTGATTTAGATGGGTGGACGGCAG AAAACAACTATTTTCATGAT
Product: phosphoadenosine phosphosulfate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 649; Mature: 649
Protein sequence:
>649_residues MVRIWPKTAKIYWDPWRNIPVVRPRQEELDLYYAVRLSEPGDARPVFPGDLEKLRGAILYEYGSDKVYTRFFNTGFMLFN KVPHWDLMYEIVSSGNVLGQLYYDPFREKWRFRLTYSGAYIANEEGLVDKAVLEGPIYTGREVKPAPSTSMRQLIIADKK GNIRGLGEVYGDSLIVVKTFHDTTMPVETSGKSASLEDVLKHNEEGLEALAGKSISYLKRLRGKYRLPVSVSYSGGKDSL VALDIAYKAFGELEMVFNDTGLELPETIKNVYEVSEKYGVRLHIASAGDIFWRAVAVFGPPGKDYRWCCKVAKLVPIARL TRTLWPNGALNIVGQRAFESLDRAKSPRVWRNKWIPHLVSTSPIQEWSQLECWLYIFKHRLPYNKLYERGFDRLGCFLCP SSALAEFKDVEKEYPELWGKWGMILEEWRVKLSQPAEWVKLGLWRWLTPASAKRRIARHIENYSMDWRREYTNRLLGSSI NLAPLEIVESNNELKILFNREVLAPSIREVVKVNMGRLGYSVEEQGDVFRVSSVNTVITVSGRSIHVKPSMSSENTEDLV DLLKVIYRAYGCVKCGSCILWIPPGNAMLTQNGPIPLKNLDDKTRRFYLEACPISDQLVEKTLVPLILGTPKAFKRKTRR RIITSEHYG
Sequences:
>Translated_649_residues MVRIWPKTAKIYWDPWRNIPVVRPRQEELDLYYAVRLSEPGDARPVFPGDLEKLRGAILYEYGSDKVYTRFFNTGFMLFN KVPHWDLMYEIVSSGNVLGQLYYDPFREKWRFRLTYSGAYIANEEGLVDKAVLEGPIYTGREVKPAPSTSMRQLIIADKK GNIRGLGEVYGDSLIVVKTFHDTTMPVETSGKSASLEDVLKHNEEGLEALAGKSISYLKRLRGKYRLPVSVSYSGGKDSL VALDIAYKAFGELEMVFNDTGLELPETIKNVYEVSEKYGVRLHIASAGDIFWRAVAVFGPPGKDYRWCCKVAKLVPIARL TRTLWPNGALNIVGQRAFESLDRAKSPRVWRNKWIPHLVSTSPIQEWSQLECWLYIFKHRLPYNKLYERGFDRLGCFLCP SSALAEFKDVEKEYPELWGKWGMILEEWRVKLSQPAEWVKLGLWRWLTPASAKRRIARHIENYSMDWRREYTNRLLGSSI NLAPLEIVESNNELKILFNREVLAPSIREVVKVNMGRLGYSVEEQGDVFRVSSVNTVITVSGRSIHVKPSMSSENTEDLV DLLKVIYRAYGCVKCGSCILWIPPGNAMLTQNGPIPLKNLDDKTRRFYLEACPISDQLVEKTLVPLILGTPKAFKRKTRR RIITSEHYG >Mature_649_residues MVRIWPKTAKIYWDPWRNIPVVRPRQEELDLYYAVRLSEPGDARPVFPGDLEKLRGAILYEYGSDKVYTRFFNTGFMLFN KVPHWDLMYEIVSSGNVLGQLYYDPFREKWRFRLTYSGAYIANEEGLVDKAVLEGPIYTGREVKPAPSTSMRQLIIADKK GNIRGLGEVYGDSLIVVKTFHDTTMPVETSGKSASLEDVLKHNEEGLEALAGKSISYLKRLRGKYRLPVSVSYSGGKDSL VALDIAYKAFGELEMVFNDTGLELPETIKNVYEVSEKYGVRLHIASAGDIFWRAVAVFGPPGKDYRWCCKVAKLVPIARL TRTLWPNGALNIVGQRAFESLDRAKSPRVWRNKWIPHLVSTSPIQEWSQLECWLYIFKHRLPYNKLYERGFDRLGCFLCP SSALAEFKDVEKEYPELWGKWGMILEEWRVKLSQPAEWVKLGLWRWLTPASAKRRIARHIENYSMDWRREYTNRLLGSSI NLAPLEIVESNNELKILFNREVLAPSIREVVKVNMGRLGYSVEEQGDVFRVSSVNTVITVSGRSIHVKPSMSSENTEDLV DLLKVIYRAYGCVKCGSCILWIPPGNAMLTQNGPIPLKNLDDKTRRFYLEACPISDQLVEKTLVPLILGTPKAFKRKTRR RIITSEHYG
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR014729 - InterPro: IPR004521 [H]
Pfam domain/function: PF01507 PAPS_reduct; PF01472 PUA [H]
EC number: NA
Molecular weight: Translated: 74460; Mature: 74460
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRIWPKTAKIYWDPWRNIPVVRPRQEELDLYYAVRLSEPGDARPVFPGDLEKLRGAILY CEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCHHHHCCEEEE EYGSDKVYTRFFNTGFMLFNKVPHWDLMYEIVSSGNVLGQLYYDPFREKWRFRLTYSGAY EECCCEEEEEECCCCHHEECCCCCHHHHHHHHHCCCEEEEHHHCHHCCCEEEEEEECCEE IANEEGLVDKAVLEGPIYTGREVKPAPSTSMRQLIIADKKGNIRGLGEVYGDSLIVVKTF EECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEE HDTTMPVETSGKSASLEDVLKHNEEGLEALAGKSISYLKRLRGKYRLPVSVSYSGGKDSL CCCCCCEECCCCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHCCCEECCEEEEECCCCCCE VALDIAYKAFGELEMVFNDTGLELPETIKNVYEVSEKYGVRLHIASAGDIFWRAVAVFGP EEEEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEECC PGKDYRWCCKVAKLVPIARLTRTLWPNGALNIVGQRAFESLDRAKSPRVWRNKWIPHLVS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCC TSPIQEWSQLECWLYIFKHRLPYNKLYERGFDRLGCFLCPSSALAEFKDVEKEYPELWGK CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHH WGMILEEWRVKLSQPAEWVKLGLWRWLTPASAKRRIARHIENYSMDWRREYTNRLLGSSI HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC NLAPLEIVESNNELKILFNREVLAPSIREVVKVNMGRLGYSVEEQGDVFRVSSVNTVITV CCCEEEEEECCCCEEEEECCCHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEE SGRSIHVKPSMSSENTEDLVDLLKVIYRAYGCVKCGSCILWIPPGNAMLTQNGPIPLKNL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCEEEECCCCCCCCCC DDKTRRFYLEACPISDQLVEKTLVPLILGTPKAFKRKTRRRIITSEHYG CCHHHEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVRIWPKTAKIYWDPWRNIPVVRPRQEELDLYYAVRLSEPGDARPVFPGDLEKLRGAILY CEEECCCCCEEEECCCCCCCCCCCCHHHCCEEEEEEECCCCCCCCCCCCCHHHHCCEEEE EYGSDKVYTRFFNTGFMLFNKVPHWDLMYEIVSSGNVLGQLYYDPFREKWRFRLTYSGAY EECCCEEEEEECCCCHHEECCCCCHHHHHHHHHCCCEEEEHHHCHHCCCEEEEEEECCEE IANEEGLVDKAVLEGPIYTGREVKPAPSTSMRQLIIADKKGNIRGLGEVYGDSLIVVKTF EECCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHCCCCEEEEEEE HDTTMPVETSGKSASLEDVLKHNEEGLEALAGKSISYLKRLRGKYRLPVSVSYSGGKDSL CCCCCCEECCCCCCCHHHHHHCCHHHHHHHHCCHHHHHHHHCCCEECCEEEEECCCCCCE VALDIAYKAFGELEMVFNDTGLELPETIKNVYEVSEKYGVRLHIASAGDIFWRAVAVFGP EEEEEHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEEEECC PGKDYRWCCKVAKLVPIARLTRTLWPNGALNIVGQRAFESLDRAKSPRVWRNKWIPHLVS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCHHCC TSPIQEWSQLECWLYIFKHRLPYNKLYERGFDRLGCFLCPSSALAEFKDVEKEYPELWGK CCCHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHCEEEECCCHHHHHHHHHHHHHHHHHHH WGMILEEWRVKLSQPAEWVKLGLWRWLTPASAKRRIARHIENYSMDWRREYTNRLLGSSI HHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC NLAPLEIVESNNELKILFNREVLAPSIREVVKVNMGRLGYSVEEQGDVFRVSSVNTVITV CCCEEEEEECCCCEEEEECCCHHCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEE SGRSIHVKPSMSSENTEDLVDLLKVIYRAYGCVKCGSCILWIPPGNAMLTQNGPIPLKNL CCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHCCEEEEECCCCEEEECCCCCCCCCC DDKTRRFYLEACPISDQLVEKTLVPLILGTPKAFKRKTRRRIITSEHYG CCHHHEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]