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The map label for this gene is rps19e [H]

Identifier: 218884425

GI number: 218884425

Start: 1049849

End: 1050322

Strand: Reverse

Name: rps19e [H]

Synonym: DKAM_1114

Alternate gene names: 218884425

Gene position: 1050322-1049849 (Counterclockwise)

Preceding gene: 218884426

Following gene: 218884424

Centisome position: 76.93

GC content: 49.37

Gene sequence:

>474_bases
ATGGTTACGGCATTAGAGGTTCCAGCTGACAAGCTAATTGAGAGGCTCGTAGAGTATTTGAAAGCAAACGTACCAGAGGT
AAAGCCGCCTACATGGAGCATGTTTGTTAAAACCAGCTCGCATAAGGAGAAGCCGCCTACTAATCCGGAATGGTGGTATT
ACAGGGCGGCGAGCATACTGAGGAAGCTCTATAAAGCCGGTGAACCAGTGGGATTAACGGAGCTTAGAAGAGAATATGGT
GGAAGGAAGAACAGGGGTGTTCGCCCCGAGAGAACTGTTAGAGCTCCTGGCAATGCGATCAGGAAGATACTGCAGCAATT
AGAGCAGGCACAGCTAGTGAGAAGGACAAGGAAGGGTAGAATTCTCACGCCTCAGGGGAAGTCGCTGCTTGATAGGCTGA
GCTTCGAGATACTCTCGGAGCTGAGTCGTGCTAATCCAGAGCTTTCAAAGTATCTTCCCCCGACAAGTCATTAA

Upstream 100 bases:

>100_bases
GGTCAGGGGCTTCACTATCACGCTTATAAGGGGTGAAGGGGATGGTTAAAAGTATTTTAAAGCATGTAGACTTAGTGATT
ACAATAGGGTGATTGAGTAA

Downstream 100 bases:

>100_bases
TAAGAATATAATTGCCCCGGGGACCACTAGATGCCTTCAGACACTGGGAGCGAATACGGTAACGAGGGATATGATGAGGA
GCTTGAGGCTATAAGAAGGA

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVTALEVPADKLIERLVEYLKANVPEVKPPTWSMFVKTSSHKEKPPTNPEWWYYRAASILRKLYKAGEPVGLTELRREYG
GRKNRGVRPERTVRAPGNAIRKILQQLEQAQLVRRTRKGRILTPQGKSLLDRLSFEILSELSRANPELSKYLPPTSH

Sequences:

>Translated_157_residues
MVTALEVPADKLIERLVEYLKANVPEVKPPTWSMFVKTSSHKEKPPTNPEWWYYRAASILRKLYKAGEPVGLTELRREYG
GRKNRGVRPERTVRAPGNAIRKILQQLEQAQLVRRTRKGRILTPQGKSLLDRLSFEILSELSRANPELSKYLPPTSH
>Mature_157_residues
MVTALEVPADKLIERLVEYLKANVPEVKPPTWSMFVKTSSHKEKPPTNPEWWYYRAASILRKLYKAGEPVGLTELRREYG
GRKNRGVRPERTVRAPGNAIRKILQQLEQAQLVRRTRKGRILTPQGKSLLDRLSFEILSELSRANPELSKYLPPTSH

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=139, Percent_Identity=35.9712230215827, Blast_Score=87, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI17508697, Length=141, Percent_Identity=38.2978723404255, Blast_Score=96, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6324027, Length=141, Percent_Identity=36.8794326241135, Blast_Score=87, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6324451, Length=141, Percent_Identity=36.8794326241135, Blast_Score=87, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24649452, Length=140, Percent_Identity=38.5714285714286, Blast_Score=98, Evalue=3e-21,
Organism=Drosophila melanogaster, GI17647891, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24642576, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24642574, Length=138, Percent_Identity=38.4057971014493, Blast_Score=90, Evalue=7e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 18085; Mature: 18085

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTALEVPADKLIERLVEYLKANVPEVKPPTWSMFVKTSSHKEKPPTNPEWWYYRAASIL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
RKLYKAGEPVGLTELRREYGGRKNRGVRPERTVRAPGNAIRKILQQLEQAQLVRRTRKGR
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ILTPQGKSLLDRLSFEILSELSRANPELSKYLPPTSH
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MVTALEVPADKLIERLVEYLKANVPEVKPPTWSMFVKTSSHKEKPPTNPEWWYYRAASIL
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
RKLYKAGEPVGLTELRREYGGRKNRGVRPERTVRAPGNAIRKILQQLEQAQLVRRTRKGR
HHHHHCCCCCCHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHCCC
ILTPQGKSLLDRLSFEILSELSRANPELSKYLPPTSH
EECCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10382966 [H]