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The map label for this gene is 218884424

Identifier: 218884424

GI number: 218884424

Start: 1049465

End: 1049818

Strand: Reverse

Name: 218884424

Synonym: DKAM_1113

Alternate gene names: NA

Gene position: 1049818-1049465 (Counterclockwise)

Preceding gene: 218884425

Following gene: 218884423

Centisome position: 76.9

GC content: 44.63

Gene sequence:

>354_bases
ATGCCTTCAGACACTGGGAGCGAATACGGTAACGAGGGATATGATGAGGAGCTTGAGGCTATAAGAAGGAGGAAGCTGGC
TGAGCTGCAGCGCCGTATAGAGGAGGAGAAGCAGAGACGTCAAATGATAGATGCAGCACTCAGAAAGATCCTTACACCAG
AGGCTAGGGAGAGACTTAATAATTTAAGACTTGTTAAACCAGAGCTCGCGGAAATGCTTGAACAACAGTTAATAGCGCTG
GCTCAAAGCGGGCGTGTGAAGATACCTATAACAGATGAGTTTTTAAAGAGGCTTTTATCAGAAATATATGAGCAGACACA
TAGAGAACCGAGGATAGAATTCAAGAGGAAATAG

Upstream 100 bases:

>100_bases
CGAGATACTCTCGGAGCTGAGTCGTGCTAATCCAGAGCTTTCAAAGTATCTTCCCCCGACAAGTCATTAATAAGAATATA
ATTGCCCCGGGGACCACTAG

Downstream 100 bases:

>100_bases
GTGTTTAAACATGGCTAGATTCAAACACGTTGCCAGGAAGCTTAGGCTTGCAGCTGCTTTGAAGTCTAATAGGGCTATAC
CGATCTGGGTGTCGGCTAAG

Product: DNA-binding TFAR19-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MPSDTGSEYGNEGYDEELEAIRRRKLAELQRRIEEEKQRRQMIDAALRKILTPEARERLNNLRLVKPELAEMLEQQLIAL
AQSGRVKIPITDEFLKRLLSEIYEQTHREPRIEFKRK

Sequences:

>Translated_117_residues
MPSDTGSEYGNEGYDEELEAIRRRKLAELQRRIEEEKQRRQMIDAALRKILTPEARERLNNLRLVKPELAEMLEQQLIAL
AQSGRVKIPITDEFLKRLLSEIYEQTHREPRIEFKRK
>Mature_116_residues
PSDTGSEYGNEGYDEELEAIRRRKLAELQRRIEEEKQRRQMIDAALRKILTPEARERLNNLRLVKPELAEMLEQQLIALA
QSGRVKIPITDEFLKRLLSEIYEQTHREPRIEFKRK

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family [H]

Homologues:

Organism=Homo sapiens, GI4759224, Length=112, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022889
- InterPro:   IPR002836 [H]

Pfam domain/function: PF01984 dsDNA_bind [H]

EC number: NA

Molecular weight: Translated: 13959; Mature: 13828

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSDTGSEYGNEGYDEELEAIRRRKLAELQRRIEEEKQRRQMIDAALRKILTPEARERLN
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NLRLVKPELAEMLEQQLIALAQSGRVKIPITDEFLKRLLSEIYEQTHREPRIEFKRK
CCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PSDTGSEYGNEGYDEELEAIRRRKLAELQRRIEEEKQRRQMIDAALRKILTPEARERLN
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
NLRLVKPELAEMLEQQLIALAQSGRVKIPITDEFLKRLLSEIYEQTHREPRIEFKRK
CCCCCCHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA